Data search
Results for MligTC455_25960
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25960 | 857 | 17.85 | Mlig455_023226, Mlig455_023287 | Neo: - Age: - Region-enriched R4: 2.277/0.00276 |
SF3B1 | Mlig455_023226 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=105.0]; HEAT repeat [PF02985.24, score=36.5]; HEAT repeats [PF13646.8, score=29.5]; HEAT-like repeat [PF13513.8, score=28.8]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [Score=1360, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [Score=1360, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [Score=1351, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [Score=1255, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [Score=1266, Expect=0.0]} {RNA1509_46649} {RNA1310_16718} {RNA815_553} Mlig455_023287 {REF} {Length: 4358} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=116.5]; HEAT repeat [PF02985.24, score=40.8]; HEAT-like repeat [PF13513.8, score=38.7]; HEAT repeats [PF13646.8, score=29.5]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [RH, Score=1673, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [RH, Score=1673, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [RH, Score=1686, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=1545, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [RH, Score=1571, Expect=0.0]} {RNA1509_30474, RNA1509_32596, RNA1509_33324, RNA1509_46649} {RNA1310_989.1, RNA1509_30474, RNA1509_32596, RNA1509_33324} {RNA1509_30474, RNA1509_32596, RNA1509_33324, RNA815_553} |
Cumulative graph for MligTC455_25960
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.235 | 4.52 | 0.50303 | 1.00000 | |
| RegionR2 | -0.428 | 4.52 | 0.51337 | 0.89014 | |
| RegionR3 | -0.114 | 4.52 | 0.83586 | 1.00000 | |
| RegionR4 | 2.277 | 4.52 | 0.00019 | 0.00276 | |
| RegionR5 | 1.112 | 4.52 | 0.01335 | 0.07140 | |
| RegionR6 | 0.028 | 4.52 | 0.95367 | 1.00000 | |
| RegionR7 | -1.002 | 4.52 | 0.17373 | 0.76539 | |
| RegionR8 | -0.638 | 4.52 | 0.41728 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.209 | 4.52 | 0.38619 | 1.00000 | |
| RegenerationR2 | -0.058 | 4.52 | 0.90920 | 1.00000 | |
| RegenerationR3 | 0.93 | 4.52 | 0.10604 | 0.51520 | |
| RegenerationR4 | -0.434 | 4.52 | 0.45603 | 0.84463 | |
| RegenerationR5 | 0.283 | 4.52 | 0.58950 | 0.90549 | |
| RegenerationR6 | 0.79 | 4.52 | 0.14946 | 0.47364 | |
| RegenerationBL | 1.594 | 4.52 | 0.00438 | 0.06039 | |
| RegenerationTP | 0.954 | 4.52 | 0.16289 | 0.59237 |
Genes with expression patterns similar to MligTC455_25960
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25960 | 857 | 17.85 | Mlig455_023226, Mlig455_023287 | Neo: - Age: - Region-enriched R4: 2.277/0.00276 |
SF3B1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_023226 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=105.0]; HEAT repeat [PF02985.24, score=36.5]; HEAT repeats [PF13646.8, score=29.5]; HEAT-like repeat [PF13513.8, score=28.8]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [Score=1360, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [Score=1360, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [Score=1351, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [Score=1255, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [Score=1266, Expect=0.0]} {RNA1509_46649} {RNA1310_16718} {RNA815_553} Mlig455_023287 {REF} {Length: 4358} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=116.5]; HEAT repeat [PF02985.24, score=40.8]; HEAT-like repeat [PF13513.8, score=38.7]; HEAT repeats [PF13646.8, score=29.5]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [RH, Score=1673, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [RH, Score=1673, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [RH, Score=1686, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=1545, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [RH, Score=1571, Expect=0.0]} {RNA1509_30474, RNA1509_32596, RNA1509_33324, RNA1509_46649} {RNA1310_989.1, RNA1509_30474, RNA1509_32596, RNA1509_33324} {RNA1509_30474, RNA1509_32596, RNA1509_33324, RNA815_553} |
| 2. | MligTC455_25959 | 453 | 9.44 | Mlig455_023213 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.340 Region-enriched R4: 2.491/0.00064 |
4.89 | 0.996 | 0.940 | 0.992 | 0.989 | - | 0.973 | Mlig455_023213 {REF} {Length: 2999} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=25.1]} {RNA1509_27081} {RNA1310_31981} {RNA815_11740} | |
| 3. | MligTC455_20948 | 2280 | 47.49 | Mlig455_044459, Mlig455_044469, Mlig455_046751 | Neo: - Age: Down-Up-Down |
POC1A | 1.657 | - | - | - | 0.951 | - | 0.706 | Mlig455_044459 {REF} {Length: 2048} {TRANSSPLICED} {Human: ENSG00000164087, POC1A, POC1 centriolar protein A, [Score=59.3, Expect=4e-10]; ENSG00000139323, POC1B, POC1 centriolar protein B, [Score=56.6, Expect=4e-09]} {Mouse: ENSMUSG00000023345, Poc1a, POC1 centriolar protein A, [Score=62.0, Expect=3e-11]} {Smed: dd_Smed_v6_10806_0_1, dd_Smed_v6_10806_0_1, [Score=51.2, Expect=7e-08]} {RNA1509_22791, RNA1509_4185} {RNA1310_12363.1, RNA1509_22791} {RNA1509_22791, RNA815_4754.1} Mlig455_044469 {REF} {Length: 2057} {TRANSSPLICED} {Human: ENSG00000164087, POC1A, POC1 centriolar protein A, [Score=59.3, Expect=4e-10]; ENSG00000139323, POC1B, POC1 centriolar protein B, [Score=56.6, Expect=4e-09]} {Mouse: ENSMUSG00000023345, Poc1a, POC1 centriolar protein A, [Score=62.0, Expect=3e-11]} {Smed: dd_Smed_v6_10806_0_1, dd_Smed_v6_10806_0_1, [Score=51.2, Expect=7e-08]} {RNA1509_4185} {RNA1310_12363.1} {RNA815_4754.1} Mlig455_046751 {REF} {Length: 2668} {TRANSSPLICED} {Human: ENSG00000164087, POC1A, POC1 centriolar protein A, [Score=59.3, Expect=4e-10]} {Mouse: ENSMUSG00000023345, Poc1a, POC1 centriolar protein A, [Score=62.0, Expect=3e-11]} {Smed: dd_Smed_v6_10806_0_1, dd_Smed_v6_10806_0_1, [Score=51.2, Expect=8e-08]} {RNA1509_4185, RNA1509_48540, RNA1509_51748} {RNA1310_12363.1, RNA1509_4185, RNA1509_48540, RNA1509_51748} {RNA1509_4185, RNA1509_48540, RNA1509_51748, RNA815_4754.1} |
| 4. | MligTC455_40471 | 673 | 14.02 | Mlig455_066907 | Neo: - Age: logFC(26M/2M)=0.399 Region-enriched R5: 1.077/0.03094 |
URI1 | 0.974 | - | - | - | - | - | 0.974 | Mlig455_066907 {REF} {Length: 1251} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF02996.19, score=31.5]} {Human: ENSG00000105176, URI1, URI1, prefoldin like chaperone, [RH, Score=50.4, Expect=2e-06]} {Mouse: ENSMUSG00000030421, Uri1, URI1, prefoldin-like chaperone, [RH, Score=53.9, Expect=1e-07]} {RNA1509_21272, RNA1509_31517} {RNA1310_14770.2, RNA1509_21272, RNA1509_31517} {RNA1509_21272, RNA1509_31517, RNA815_6844} |
| 5. | MligTC455_38946 | 4645 | 96.76 | Mlig455_066911 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.346 Region-enriched R7: 1.935/0.00000 |
HSP90B1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_066911 {REF} {Length: 4277} {Pfam: Hsp90 protein [PF00183.20, score=709.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=49.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.1]} {Human: ENSG00000166598, HSP90B1, heat shock protein 90 beta family member 1, [RH, Score=894, Expect=0.0]} {Mouse: ENSMUSG00000020048, Hsp90b1, heat shock protein 90, beta (Grp94), member 1, [RH, Score=909, Expect=0.0]} {Dmel: FBgn0039562, Gp93, Glycoprotein 93, [RH, Score=885, Expect=0.0]} {Celegans: WBGene00011480, enpl-1, Endoplasmin homolog, [RH, Score=845, Expect=0.0]} {Smed: dd_Smed_v6_758_1_1, dd_Smed_v6_758_1_1, [RH, Score=979, Expect=0.0]} {RNA1509_10887, RNA1509_537} {RNA1310_2681, RNA1509_10887, RNA1509_537} {RNA1509_10887, RNA1509_537, RNA815_1298.2} |
| 6. | MligTC455_32363 | 604 | 12.59 | Mlig455_037021 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_037021 {REF} {Length: 5141} {RNA1509_48728, RNA1509_55155} {RNA1310_27345, RNA1509_55155} {RNA1509_55155, RNA815_6529.1} | |
| 7. | MligTC455_48602 | 667 | 13.9 | Mlig455_042049 | Neo: - Age: - |
SLC35E3 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_042049 {REF} {Length: 2900} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=65.7]; EamA-like transporter family [PF00892.22, score=32.5]; UAA transporter family [PF08449.13, score=24.6]} {Human: ENSG00000175782, SLC35E3, solute carrier family 35 member E3, [RH, Score=294, Expect=9e-99]} {Mouse: ENSMUSG00000060181, Slc35e3, solute carrier family 35, member E3, [RH, Score=289, Expect=1e-96]} {RNA1509_18211, RNA1509_50446, RNA1509_51261, RNA1509_55265} {RNA1310_17614, RNA1509_50446, RNA1509_51261, RNA1509_55265} {RNA1509_50446, RNA1509_51261, RNA1509_55265, RNA815_11669} |
| 8. | MligTC455_18148 | 1499 | 31.23 | Mlig455_048309, Mlig455_048353 | Neo: Int S/G2/M Age: - |
U2AF1L5 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_048309 {REF} {Length: 2547} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=51.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=28.7]; Torus domain [PF16131.7, score=25.9]; Zinc finger domain [PF18345.3, score=24.1]} {Human: ENSG00000275895, U2AF1L5, U2 small nuclear RNA auxiliary factor 1 like 5, [RH, Score=337, Expect=3e-118]; ENSG00000160201, U2AF1, U2 small nuclear RNA auxiliary factor 1, [RH, Score=337, Expect=3e-118]} {Mouse: ENSMUSG00000061613, U2af1, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, [RH, Score=337, Expect=2e-118]; ENSMUSG00000078765, U2af1l4, U2 small nuclear RNA auxiliary factor 1-like 4, [RH, Score=332, Expect=1e-116]; ENSMUSG00000109378, Gm49396, predicted gene, 49396, [RH, Score=332, Expect=1e-116]} {Dmel: FBgn0017457, U2af38, U2 small nuclear riboprotein auxiliary factor 38, [RH, Score=329, Expect=6e-115]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [RH, Score=265, Expect=3e-89]} {Smed: dd_Smed_v6_4061_0_2, dd_Smed_v6_4061_0_2, [RH, Score=361, Expect=3e-128]} {RNA1509_16766, RNA1509_16935} {RNA1310_24807, RNA1509_16766, RNA1509_16935} {RNA1509_16766, RNA1509_16935, RNA815_15940.1} Mlig455_048353 {REF} {Length: 1999} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=51.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=28.7]; Torus domain [PF16131.7, score=25.9]; Zinc finger domain [PF18345.3, score=24.1]} {Human: ENSG00000275895, U2AF1L5, U2 small nuclear RNA auxiliary factor 1 like 5, [RH, Score=337, Expect=3e-118]; ENSG00000160201, U2AF1, U2 small nuclear RNA auxiliary factor 1, [RH, Score=337, Expect=3e-118]} {Mouse: ENSMUSG00000061613, U2af1, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, [RH, Score=337, Expect=2e-118]; ENSMUSG00000078765, U2af1l4, U2 small nuclear RNA auxiliary factor 1-like 4, [RH, Score=332, Expect=1e-116]; ENSMUSG00000109378, Gm49396, predicted gene, 49396, [RH, Score=332, Expect=1e-116]} {Dmel: FBgn0017457, U2af38, U2 small nuclear riboprotein auxiliary factor 38, [RH, Score=329, Expect=6e-115]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [RH, Score=265, Expect=3e-89]} {Smed: dd_Smed_v6_4061_0_2, dd_Smed_v6_4061_0_2, [RH, Score=361, Expect=3e-128]} {RNA1509_16935} {RNA1310_24807} {RNA815_15940.1} |