Data search


search
Exact
Search

Results for MligTC455_40471

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40471 673 14.02 Mlig455_066907

Neo: -

Age: logFC(26M/2M)=0.399

Region-enriched R5: 1.077/0.03094

URI1 Mlig455_066907 {REF} {Length: 1251} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF02996.19, score=31.5]} {Human: ENSG00000105176, URI1, URI1, prefoldin like chaperone, [RH, Score=50.4, Expect=2e-06]} {Mouse: ENSMUSG00000030421, Uri1, URI1, prefoldin-like chaperone, [RH, Score=53.9, Expect=1e-07]} {RNA1509_21272, RNA1509_31517} {RNA1310_14770.2, RNA1509_21272, RNA1509_31517} {RNA1509_21272, RNA1509_31517, RNA815_6844}

Cumulative graph for MligTC455_40471

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.411 4.091 0.72793 1.00000
RegionR2 -0.315 4.091 0.56957 0.93029
RegionR3 -0.113 4.091 0.81513 1.00000
RegionR4 0.682 4.091 0.16198 0.42053
RegionR5 1.077 4.091 0.00431 0.03094
RegionR6 0.404 4.091 0.36591 0.94730
RegionR7 0.087 4.091 0.88381 1.00000
RegionR8 -2.233 4.091 0.04678 0.42459

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.362 4.091 0.79182 1.00000
RegenerationR2 0.711 4.091 0.09158 0.48375
RegenerationR3 0.908 4.091 0.04920 0.38541
RegenerationR4 0.506 4.091 0.25995 0.70810
RegenerationR5 0.486 4.091 0.22019 0.65485
RegenerationR6 1.003 4.091 0.02418 0.19347
RegenerationBL 1.581 4.091 0.00809 0.08833
RegenerationTP 2.004 4.091 0.00516 0.12063


Genes with expression patterns similar to MligTC455_40471

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40471 673 14.02 Mlig455_066907

Neo: -

Age: logFC(26M/2M)=0.399

Region-enriched R5: 1.077/0.03094

URI1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_066907 {REF} {Length: 1251} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF02996.19, score=31.5]} {Human: ENSG00000105176, URI1, URI1, prefoldin like chaperone, [RH, Score=50.4, Expect=2e-06]} {Mouse: ENSMUSG00000030421, Uri1, URI1, prefoldin-like chaperone, [RH, Score=53.9, Expect=1e-07]} {RNA1509_21272, RNA1509_31517} {RNA1310_14770.2, RNA1509_21272, RNA1509_31517} {RNA1509_21272, RNA1509_31517, RNA815_6844}
2. MligTC455_25960 857 17.85 Mlig455_023226, Mlig455_023287

Neo: -

Age: -

Region-enriched R4: 2.277/0.00276

SF3B1 0.974 - - - - - 0.974

Mlig455_023226 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=105.0]; HEAT repeat [PF02985.24, score=36.5]; HEAT repeats [PF13646.8, score=29.5]; HEAT-like repeat [PF13513.8, score=28.8]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [Score=1360, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [Score=1360, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [Score=1351, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [Score=1255, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [Score=1266, Expect=0.0]} {RNA1509_46649} {RNA1310_16718} {RNA815_553}

Mlig455_023287 {REF} {Length: 4358} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=116.5]; HEAT repeat [PF02985.24, score=40.8]; HEAT-like repeat [PF13513.8, score=38.7]; HEAT repeats [PF13646.8, score=29.5]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [RH, Score=1673, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [RH, Score=1673, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [RH, Score=1686, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=1545, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [RH, Score=1571, Expect=0.0]} {RNA1509_30474, RNA1509_32596, RNA1509_33324, RNA1509_46649} {RNA1310_989.1, RNA1509_30474, RNA1509_32596, RNA1509_33324} {RNA1509_30474, RNA1509_32596, RNA1509_33324, RNA815_553}
3. MligTC455_47925 3222 67.13 Mlig455_064845

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.375

Region-enriched R5: 1.006/0.00030

EEF1E1 0.964 - - - - 0.964 - Mlig455_064845 {REF} {Length: 569} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF00043.27, score=22.8]} {Human: ENSG00000124802, EEF1E1, eukaryotic translation elongation factor 1 epsilon 1, [RH, Score=58.9, Expect=4e-11]} {Mouse: ENSMUSG00000001707, Eef1e1, eukaryotic translation elongation factor 1 epsilon 1, [RH, Score=62.4, Expect=1e-12]} {Smed: dd_Smed_v6_3161_0_1, dd_Smed_v6_3161_0_1, [RH, Score=47.8, Expect=7e-08]} {RNA1509_7015, RNA1509_9561} {RNA1310_62841, RNA1509_7015, RNA1509_9561} {RNA1509_7015, RNA1509_9561, RNA815_32030}
4. MligTC455_05614 808 16.83 Mlig455_033658

Neo: -

Age: Down-Down-Up

EPHX1 0.959 - - 0.959 - - - Mlig455_033658 {REF} {Length: 1910} {Pfam: Epoxide hydrolase N terminus [PF06441.14, score=109.2]; alpha/beta hydrolase fold [PF00561.22, score=59.6]} {Human: ENSG00000143819, EPHX1, epoxide hydrolase 1, [RH, Score=374, Expect=1e-125]} {Mouse: ENSMUSG00000038776, Ephx1, epoxide hydrolase 1, microsomal, [RH, Score=367, Expect=5e-123]} {Dmel: FBgn0010053, Jheh1, Juvenile hormone epoxide hydrolase 1, [RH, Score=304, Expect=3e-98]} {Celegans: WBGene00020909, W01A11.1, Epoxide hydrolase, [Score=329, Expect=2e-108]} {Smed: dd_Smed_v6_5113_0_1, dd_Smed_v6_5113_0_1, [Score=333, Expect=4e-110]} {RNA1509_11467} {RNA1310_15477, RNA1509_11467} {RNA1509_11467, RNA815_6806.1}
5. MligTC455_48602 667 13.9 Mlig455_042049

Neo: -

Age: -

SLC35E3 0.956 - - - - - 0.956 Mlig455_042049 {REF} {Length: 2900} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=65.7]; EamA-like transporter family [PF00892.22, score=32.5]; UAA transporter family [PF08449.13, score=24.6]} {Human: ENSG00000175782, SLC35E3, solute carrier family 35 member E3, [RH, Score=294, Expect=9e-99]} {Mouse: ENSMUSG00000060181, Slc35e3, solute carrier family 35, member E3, [RH, Score=289, Expect=1e-96]} {RNA1509_18211, RNA1509_50446, RNA1509_51261, RNA1509_55265} {RNA1310_17614, RNA1509_50446, RNA1509_51261, RNA1509_55265} {RNA1509_50446, RNA1509_51261, RNA1509_55265, RNA815_11669}
6. MligTC455_49424 368 7.67 Mlig455_051752

Neo: -

Age: Down-Up-Down

PPM1D 0.954 - - - 0.954 - - Mlig455_051752 {REF} {Length: 3711} {Pfam: Protein phosphatase 2C [PF00481.23, score=213.0]} {Human: ENSG00000170836, PPM1D, protein phosphatase, Mg2+/Mn2+ dependent 1D, [RH, Score=270, Expect=5e-82]} {Mouse: ENSMUSG00000020525, Ppm1d, protein phosphatase 1D magnesium-dependent, delta isoform, [RH, Score=268, Expect=2e-81]} {Dmel: FBgn0022768, Pp2C1, Protein phosphatase 2C, [RH, Score=306, Expect=6e-91]} {Celegans: WBGene00021856, Y54F10BM.1, [RH, Score=251, Expect=5e-74]} {Smed: dd_Smed_v6_56771_0_1, dd_Smed_v6_56771_0_1, [RH, Score=376, Expect=4e-127]} {RNA1509_9938} {RNA1310_10931} {RNA815_1300}
7. MligTC455_32363 604 12.59 Mlig455_037021

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_037021 {REF} {Length: 5141} {RNA1509_48728, RNA1509_55155} {RNA1310_27345, RNA1509_55155} {RNA1509_55155, RNA815_6529.1}
8. MligTC455_20718 632 13.17 Mlig455_024599

Neo: -

Age: -

MARCH6 0.951 - - - - - 0.951 Mlig455_024599 {REF} {Length: 3922} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=54.3]} {Human: ENSG00000145495, MARCH6, membrane associated ring-CH-type finger 6, [RH, Score=441, Expect=8e-140]} {Mouse: ENSMUSG00000039100, March6, membrane-associated ring finger (C3HC4) 6, [RH, Score=447, Expect=3e-142]} {Dmel: FBgn0035333, CG1317, [RH, Score=171, Expect=2e-43]} {Celegans: WBGene00018847, marc-6, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [RH, Score=221, Expect=2e-59]} {Smed: dd_Smed_v6_4584_0_1, dd_Smed_v6_4584_0_1, [RH, Score=374, Expect=7e-115]} {RNA1509_37473, RNA1509_50909, RNA1509_8006} {RNA1310_5490, RNA1509_37473, RNA1509_50909, RNA1509_8006} {RNA1509_37473, RNA1509_50909, RNA1509_8006, RNA815_7121}
9. MligTC455_37101 1964 40.92 Mlig455_012277

Neo: -

Age: logFC(26M/2M)=0.242

UBA1 0.95 - - - 0.950 - - Mlig455_012277 {REF} {Length: 4633} {Pfam: ThiF family [PF00899.23, score=364.6]; Ubiquitin-activating enzyme active site [PF10585.11, score=274.5]; Ubiquitin fold domain [PF09358.12, score=121.9]; Ubiquitin-activating enzyme E1 FCCH domain [PF16190.7, score=100.4]; Ubiquitin-activating enzyme E1 four-helix bundle [PF16191.7, score=83.8]} {Human: ENSG00000130985, UBA1, ubiquitin like modifier activating enzyme 1, [RH, Score=1165, Expect=0.0]} {Mouse: ENSMUSG00000001924, Uba1, ubiquitin-like modifier activating enzyme 1, [RH, Score=1154, Expect=0.0]; ENSMUSG00000069053, Uba1y, ubiquitin-activating enzyme, Chr Y, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0023143, Uba1, Ubiquitin activating enzyme 1, [RH, Score=1081, Expect=0.0]} {Celegans: WBGene00006699, uba-1, UBA (Human ubiquitin) related, [RH, Score=881, Expect=0.0]} {Smed: dd_Smed_v6_2377_0_1, dd_Smed_v6_2377_0_1, [RH, Score=1079, Expect=0.0]} {RNA1509_23690} {RNA1310_1533.1} {RNA815_342.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA