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Results for MligTC455_26009

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26009 445 9.27 Mlig455_049192

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.350

 GTF2B Mlig455_049192 {REF} {Length: 3141} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=167.0]; TFIIB zinc-binding [PF08271.14, score=42.3]; Cyclin, N-terminal domain [PF00134.25, score=34.8]; F5/8 type C domain [PF00754.27, score=21.9]} {Human: ENSG00000137947, GTF2B, general transcription factor IIB, [RH, Score=372, Expect=6e-126]} {Mouse: ENSMUSG00000028271, Gtf2b, general transcription factor IIB, [RH, Score=372, Expect=3e-126]} {Dmel: FBgn0004915, TfIIB, Transcription factor IIB, [RH, Score=375, Expect=1e-127]} {Celegans: WBGene00006648, ttb-1, Transcription initiation factor IIB, [RH, Score=323, Expect=3e-107]} {Smed: dd_Smed_v6_2474_0_1, dd_Smed_v6_2474_0_1, [RH, Score=308, Expect=2e-101]} {RNA1509_32364} {RNA1310_5426} {RNA815_13955}

Cumulative graph for MligTC455_26009

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.759 3.559 0.16510 0.78899
RegionR2 1.54 3.559 0.07003 0.32230
RegionR3 1.292 3.559 0.09740 0.54775
RegionR4 0.429 3.559 0.63769 0.94413
RegionR5 0.041 3.559 0.83585 1.00000
RegionR6 0.436 3.559 0.63601 1.00000
RegionR7 0.538 3.559 0.61560 1.00000
RegionR8 1.485 3.559 0.21506 0.81945

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.395 3.559 0.69971 1.00000
RegenerationR2 0.039 3.559 0.94064 1.00000
RegenerationR3 -0.294 3.559 0.57861 0.89842
RegenerationR4 0.426 3.559 0.43090 0.83080
RegenerationR5 0.617 3.559 0.25464 0.68756
RegenerationR6 1.285 3.559 0.02416 0.19337
RegenerationBL 1.135 3.559 0.06203 0.28933
RegenerationTP 0.801 3.559 0.25171 0.69927


Genes with expression patterns similar to MligTC455_26009

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26009 445 9.27 Mlig455_049192

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.350

 GTF2B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049192 {REF} {Length: 3141} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=167.0]; TFIIB zinc-binding [PF08271.14, score=42.3]; Cyclin, N-terminal domain [PF00134.25, score=34.8]; F5/8 type C domain [PF00754.27, score=21.9]} {Human: ENSG00000137947, GTF2B, general transcription factor IIB, [RH, Score=372, Expect=6e-126]} {Mouse: ENSMUSG00000028271, Gtf2b, general transcription factor IIB, [RH, Score=372, Expect=3e-126]} {Dmel: FBgn0004915, TfIIB, Transcription factor IIB, [RH, Score=375, Expect=1e-127]} {Celegans: WBGene00006648, ttb-1, Transcription initiation factor IIB, [RH, Score=323, Expect=3e-107]} {Smed: dd_Smed_v6_2474_0_1, dd_Smed_v6_2474_0_1, [RH, Score=308, Expect=2e-101]} {RNA1509_32364} {RNA1310_5426} {RNA815_13955}
2. MligTC455_39968 3050 63.55 Mlig455_038803, Mlig455_038818

Neo: -

Age: -

 ARMH1 1.768 - 0.816 - - 0.952 -

Mlig455_038803 {REF} {Length: 1521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=307.3]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.8]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [Score=330, Expect=1e-109]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [Score=348, Expect=9e-117]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [Score=452, Expect=2e-158]} {RNA1509_47565} {RNA1310_17500.2} {RNA815_7289}

Mlig455_038818 {REF} {Length: 1590} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=371.8]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.7]; HEAT repeats [PF13646.8, score=23.6]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [RH, Score=388, Expect=4e-132]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [RH, Score=405, Expect=9e-139]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_47565, RNA1509_5763} {RNA1310_17500.1, RNA1509_47565, RNA1509_5763} {RNA1509_47565, RNA1509_5763, RNA815_7289}
3. MligTC455_19173 2419 50.39 Mlig455_042556

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_042556 {REF} {Length: 2405} {TRANSSPLICED} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=63.2]; Lipoma HMGIC fusion partner-like protein [PF10242.11, score=20.8]} {Dmel: FBgn0013720, pck, pickel, [Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2204_1_2, dd_Smed_v6_2204_1_2, [Score=168, Expect=2e-50]} {RNA1509_5823, RNA1509_6115} {RNA1310_30062, RNA1509_5823, RNA1509_6115} {RNA1509_5823, RNA1509_6115, RNA815_14070}
4. MligTC455_28174 190 3.95 Mlig455_051788

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_051788 {REF} {Length: 560} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30941} {RNA1310_13121} {RNA815_27783}
5. MligTC455_30657 4537 94.51 Mlig455_008136, Mlig455_012767, Mlig455_021206, Mlig455_026384, Mlig455_031693, Mlig455_035725, Mlig455_048790, Mlig455_067398, Mlig455_070686, Mlig455_070938

Neo: -

Age: logFC(26M/2M)=0.458

 0.96 - - - 0.960 - -

Mlig455_008136 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_012767 {REF} {Length: 1406} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_021206 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_026384 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_031693 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_035725 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_048790 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_067398 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_070686 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206, RNA1509_19667} {RNA1509_19667, RNA815_21977}

Mlig455_070938 {REF} {Length: 1404} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}
6. MligTC455_31547 898 18.7 Mlig455_069777, Mlig455_069778

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_069777 {REF} {Length: 5032} {RNA1509_52318} {RNA1310_12487, RNA1509_52318} {RNA1509_52318, RNA815_9587}

Mlig455_069778 {REF} {Length: 3336} {Pfam: FlgD Tudor-like domain [PF13861.8, score=19.1]} {Mouse: ENSMUSG00000021057, Akap5, A kinase (PRKA) anchor protein 5, [Score=87.4, Expect=9e-18]} {RNA1509_13587} {RNA1310_20381.1} {RNA815_15264}
7. MligTC455_28851 635 13.22 Mlig455_015966, Mlig455_015985, Mlig455_016082, Mlig455_041037, Mlig455_051413, Mlig455_059417

Neo: -

Age: -

 0.952 - - 0.952 - - -

Mlig455_015966 {REF} {Length: 4813} {RNA1509_34937} {RNA1310_2313.1} {RNA815_7759.1}

Mlig455_015985 {REF} {Length: 5033} {RNA1509_34937, RNA1509_37327} {RNA1310_2313.1, RNA1509_37327} {RNA1509_37327, RNA815_7759.1}

Mlig455_016082 {REF} {Length: 419} {NoTransDecoderORF} {RNA1509_34937} {RNA1310_3298} {RNA815_22311}

Mlig455_041037 {REF} {Length: 2026} {RNA1509_22642} {RNA1310_32012} {RNA815_16629}

Mlig455_051413 {REF} {Length: 3765} {RNA1509_34937, RNA1509_47681} {RNA1310_3298, RNA1509_47681} {RNA1509_47681, RNA815_7759.1}

Mlig455_059417 {REF} {Length: 3670} {RNA1509_34937} {RNA1310_2313.1} {RNA815_7759.1}

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