TomoSeq data search

Data search

Results for MligTC455_30657

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30657	4537	94.51	Mlig455_008136, Mlig455_012767, Mlig455_021206, Mlig455_026384, Mlig455_031693, Mlig455_035725, Mlig455_048790, Mlig455_067398, Mlig455_070686, Mlig455_070938	Neo: - Age: logFC(26M/2M)=0.458		Mlig455_008136 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_012767 {REF} {Length: 1406} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_021206 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_026384 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_031693 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_035725 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_048790 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_067398 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_070686 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206, RNA1509_19667} {RNA1509_19667, RNA815_21977} Mlig455_070938 {REF} {Length: 1404} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_30657

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.484	6.756	0.11394	0.69892
RegionR2	1.037	6.756	0.05816	0.29008
RegionR3	-0.03	6.756	0.95175	1.00000
RegionR4	-0.657	6.756	0.23240	0.52619
RegionR5	-1.265	6.756	0.01126	0.06283
RegionR6	-0.001	6.756	0.99859	1.00000
RegionR7	1.139	6.756	0.00710	0.13888
RegionR8	1.26	6.756	0.00704	0.15425

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.823	6.756	0.03781	0.65677
RegenerationR2	-0.968	6.756	0.10360	0.50762
RegenerationR3	-0.268	6.756	0.65720	0.93201
RegenerationR4	-0.209	6.756	0.73817	0.96716
RegenerationR5	0.008	6.756	0.98908	1.00000
RegenerationR6	-0.378	6.756	0.53828	0.83200
RegenerationBL	-0.344	6.756	0.52615	0.88662
RegenerationTP	0.066	6.756	0.90757	1.00000

Genes with expression patterns similar to MligTC455_30657

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30657	4537	94.51	Mlig455_008136, Mlig455_012767, Mlig455_021206, Mlig455_026384, Mlig455_031693, Mlig455_035725, Mlig455_048790, Mlig455_067398, Mlig455_070686, Mlig455_070938	Neo: - Age: logFC(26M/2M)=0.458		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008136 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_012767 {REF} {Length: 1406} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_021206 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_026384 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_031693 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_035725 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_048790 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_067398 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977} Mlig455_070686 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206, RNA1509_19667} {RNA1509_19667, RNA815_21977} Mlig455_070938 {REF} {Length: 1404} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}
2.	MligTC455_30660	1932	40.24	Mlig455_000272, Mlig455_031694, Mlig455_032274, Mlig455_048791, Mlig455_058352, Mlig455_063978	Neo: - Age: -	KMT5A	5.585	0.995	0.996	0.941	0.876	0.951	0.826	Mlig455_000272 {REF} {Length: 2489} {TRANSSPLICED} {RNA1509_44078} {RNA1310_33930} {RNA815_36307} Mlig455_031694 {REF} {Length: 1079} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_36307} Mlig455_032274 {REF} {Length: 1563} {NoTransDecoderORF} {RNA1509_19667} {RNA1310_34206} {RNA815_36307} Mlig455_048791 {REF} {Length: 1079} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_36307} Mlig455_058352 {REF} {Length: 364} {NoTransDecoderORF} {RNA1509_59044} {RNA1310_23908} {RNA815_36307} Mlig455_063978 {REF} {Length: 1009} {NoTransDecoderORF} {RNA1509_2996} {RNA1310_18007} {RNA815_36307}
3.	MligTC455_26009	445	9.27	Mlig455_049192	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-1.350	GTF2B	0.96	-	-	-	0.960	-	-	Mlig455_049192 {REF} {Length: 3141} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=167.0]; TFIIB zinc-binding [PF08271.14, score=42.3]; Cyclin, N-terminal domain [PF00134.25, score=34.8]; F5/8 type C domain [PF00754.27, score=21.9]} {Human: ENSG00000137947, GTF2B, general transcription factor IIB, [RH, Score=372, Expect=6e-126]} {Mouse: ENSMUSG00000028271, Gtf2b, general transcription factor IIB, [RH, Score=372, Expect=3e-126]} {Dmel: FBgn0004915, TfIIB, Transcription factor IIB, [RH, Score=375, Expect=1e-127]} {Celegans: WBGene00006648, ttb-1, Transcription initiation factor IIB, [RH, Score=323, Expect=3e-107]} {Smed: dd_Smed_v6_2474_0_1, dd_Smed_v6_2474_0_1, [RH, Score=308, Expect=2e-101]} {RNA1509_32364} {RNA1310_5426} {RNA815_13955}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_30657

4537

94.51

Mlig455_008136, Mlig455_012767, Mlig455_021206, Mlig455_026384, Mlig455_031693, Mlig455_035725, Mlig455_048790, Mlig455_067398, Mlig455_070686, Mlig455_070938

Neo: -

Age: logFC(26M/2M)=0.458

1.000

Mlig455_008136 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_012767 {REF} {Length: 1406} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_021206 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_026384 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_031693 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_035725 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_048790 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_067398 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

Mlig455_070686 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206, RNA1509_19667} {RNA1509_19667, RNA815_21977}

Mlig455_070938 {REF} {Length: 1404} {TRANSSPLICED} {RNA1509_19667} {RNA1310_34206} {RNA815_21977}

MligTC455_30660

1932

40.24

Mlig455_000272, Mlig455_031694, Mlig455_032274, Mlig455_048791, Mlig455_058352, Mlig455_063978

Neo: -

Age: -

KMT5A

5.585

0.995

0.996

0.941

0.876

0.951

0.826

Mlig455_000272 {REF} {Length: 2489} {TRANSSPLICED} {RNA1509_44078} {RNA1310_33930} {RNA815_36307}

Mlig455_031694 {REF} {Length: 1079} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_36307}

Mlig455_032274 {REF} {Length: 1563} {NoTransDecoderORF} {RNA1509_19667} {RNA1310_34206} {RNA815_36307}

Mlig455_048791 {REF} {Length: 1079} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_36307}

Mlig455_058352 {REF} {Length: 364} {NoTransDecoderORF} {RNA1509_59044} {RNA1310_23908} {RNA815_36307}

Mlig455_063978 {REF} {Length: 1009} {NoTransDecoderORF} {RNA1509_2996} {RNA1310_18007} {RNA815_36307}

MligTC455_26009

445

9.27

Mlig455_049192

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.350

GTF2B

0.96

0.960

Mlig455_049192 {REF} {Length: 3141} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=167.0]; TFIIB zinc-binding [PF08271.14, score=42.3]; Cyclin, N-terminal domain [PF00134.25, score=34.8]; F5/8 type C domain [PF00754.27, score=21.9]} {Human: ENSG00000137947, GTF2B, general transcription factor IIB, [RH, Score=372, Expect=6e-126]} {Mouse: ENSMUSG00000028271, Gtf2b, general transcription factor IIB, [RH, Score=372, Expect=3e-126]} {Dmel: FBgn0004915, TfIIB, Transcription factor IIB, [RH, Score=375, Expect=1e-127]} {Celegans: WBGene00006648, ttb-1, Transcription initiation factor IIB, [RH, Score=323, Expect=3e-107]} {Smed: dd_Smed_v6_2474_0_1, dd_Smed_v6_2474_0_1, [RH, Score=308, Expect=2e-101]} {RNA1509_32364} {RNA1310_5426} {RNA815_13955}