TomoSeq data search

Data search

Results for MligTC455_26037

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26037

2717

56.60

Mlig455_059001

Neo: -

Age: -

GPT2

Mlig455_059001 {REF} {Length: 2157} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=118.1]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [RH, Score=588, Expect=0.0]; ENSG00000167701, GPT, glutamic--pyruvic transaminase, [RH, Score=578, Expect=0.0]} {Mouse: ENSMUSG00000022546, Gpt, glutamic pyruvic transaminase, soluble, [RH, Score=594, Expect=0.0]; ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0030478, CG1640, [RH, Score=575, Expect=0.0]} {Celegans: WBGene00016333, C32F10.8, [RH, Score=550, Expect=0.0]} {Smed: dd_Smed_v6_2988_0_1, dd_Smed_v6_2988_0_1, [RH, Score=646, Expect=0.0]} {RNA1509_1361, RNA1509_15189, RNA1509_31918, RNA1509_53011} {RNA1310_12302.1, RNA1509_1361, RNA1509_15189, RNA1509_31918, RNA1509_53011} {RNA1509_1361, RNA1509_15189, RNA1509_31918, RNA1509_53011, RNA815_4235.1}

Cumulative graph for MligTC455_26037

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.145	6.056	0.82301	1.00000
RegionR2	0.013	6.056	0.97448	1.00000
RegionR3	0.069	6.056	0.84106	1.00000
RegionR4	0.687	6.056	0.08378	0.27332
RegionR5	0.337	6.056	0.29435	0.62741
RegionR6	-0.129	6.056	0.71016	1.00000
RegionR7	-0.056	6.056	0.88170	1.00000
RegionR8	-1.067	6.056	0.02640	0.31684

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.814	6.056	0.01814	0.54998
RegenerationR2	0.069	6.056	0.86747	1.00000
RegenerationR3	-0.134	6.056	0.75739	0.96701
RegenerationR4	-0.322	6.056	0.47387	0.85562
RegenerationR5	-0.028	6.056	0.94666	1.00000
RegenerationR6	-0.086	6.056	0.84116	0.99633
RegenerationBL	0.272	6.056	0.51613	0.87913
RegenerationTP	-0.659	6.056	0.18773	0.62508

Genes with expression patterns similar to MligTC455_26037

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26037	2717	56.6	Mlig455_059001	Neo: - Age: -	GPT2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_059001 {REF} {Length: 2157} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=118.1]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [RH, Score=588, Expect=0.0]; ENSG00000167701, GPT, glutamic--pyruvic transaminase, [RH, Score=578, Expect=0.0]} {Mouse: ENSMUSG00000022546, Gpt, glutamic pyruvic transaminase, soluble, [RH, Score=594, Expect=0.0]; ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0030478, CG1640, [RH, Score=575, Expect=0.0]} {Celegans: WBGene00016333, C32F10.8, [RH, Score=550, Expect=0.0]} {Smed: dd_Smed_v6_2988_0_1, dd_Smed_v6_2988_0_1, [RH, Score=646, Expect=0.0]} {RNA1509_1361, RNA1509_15189, RNA1509_31918, RNA1509_53011} {RNA1310_12302.1, RNA1509_1361, RNA1509_15189, RNA1509_31918, RNA1509_53011} {RNA1509_1361, RNA1509_15189, RNA1509_31918, RNA1509_53011, RNA815_4235.1}
2.	MligTC455_26036	2859	59.57	Mlig455_042184	Neo: - Age: -	GPT2	2.719	0.830	0.917	-	0.972	-	-	Mlig455_042184 {REF} {Length: 2176} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=118.0]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [RH, Score=588, Expect=0.0]; ENSG00000167701, GPT, glutamic--pyruvic transaminase, [RH, Score=578, Expect=0.0]} {Mouse: ENSMUSG00000022546, Gpt, glutamic pyruvic transaminase, soluble, [RH, Score=595, Expect=0.0]; ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0030478, CG1640, [RH, Score=575, Expect=0.0]} {Celegans: WBGene00016333, C32F10.8, [RH, Score=551, Expect=0.0]} {Smed: dd_Smed_v6_2988_0_1, dd_Smed_v6_2988_0_1, [RH, Score=647, Expect=0.0]} {RNA1509_15687, RNA1509_16067, RNA1509_31918, RNA1509_43029} {RNA1310_12302.1, RNA1509_15687, RNA1509_16067, RNA1509_43029} {RNA1509_15687, RNA1509_16067, RNA1509_43029, RNA815_4235.1}
3.	MligTC455_27795	564	11.75	Mlig455_005628	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.644	HELZ2	1.732	-	-	-	0.966	0.766	-	Mlig455_005628 {REF} {Length: 8036} {Pfam: RNB domain [PF00773.21, score=174.9]; AAA domain [PF13086.8, score=132.5]; AAA domain [PF13087.8, score=129.4]; UvrD-like helicase C-terminal domain [PF13361.8, score=21.5]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.3]; AAA domain [PF13604.8, score=21.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=18.8]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=171, Expect=9e-42]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=149, Expect=5e-35]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [Score=118, Expect=4e-26]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=108, Expect=3e-23]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=318, Expect=2e-87]} {RNA1509_28701, RNA1509_35591} {RNA1310_587.1, RNA1509_28701, RNA1509_35591} {RNA1509_28701, RNA1509_35591, RNA815_982.1}
4.	MligTC455_21092	581	12.11	Mlig455_014955	Neo: - Age: -	LRP3	0.964	-	-	-	0.964	-	-	Mlig455_014955 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=53.2]} {Human: ENSG00000130881, LRP3, LDL receptor related protein 3, [Score=115, Expect=1e-27]} {Mouse: ENSMUSG00000001802, Lrp3, low density lipoprotein receptor-related protein 3, [RH, Score=114, Expect=1e-27]} {Dmel: FBgn0053087, LRP1, LDL receptor protein 1, [Score=71.6, Expect=3e-13]} {Celegans: WBGene00003072, lrp-2, Low-density lipoprotein RecePtor related, [Score=73.6, Expect=6e-14]} {Smed: dd_Smed_v6_6784_0_1, dd_Smed_v6_6784_0_1, [RH, Score=155, Expect=2e-43]} {RNA1509_31076} {RNA1310_16875.1} {RNA815_33006}
5.	MligTC455_28138	1190	24.79	Mlig455_022674, Mlig455_032517	Neo: - Age: Up-Down-Down		0.95	-	-	-	0.950	-	-	Mlig455_022674 {REF} {Length: 3801} {TRANSSPLICED} {Smed: dd_Smed_v6_17025_0_1, dd_Smed_v6_17025_0_1, [Score=43.9, Expect=6e-06]} {RNA1509_59938} {RNA1310_850} {RNA815_1208.1} Mlig455_032517 {REF} {Length: 3495} {TRANSSPLICED} {Smed: dd_Smed_v6_17025_0_1, dd_Smed_v6_17025_0_1, [Score=43.9, Expect=6e-06]} {RNA1509_1582} {RNA1310_850} {RNA815_1208.1}
6.	MligTC455_28716	541	11.27	Mlig455_025780	Neo: - Age: Up-Down-Down	LRBA	0.95	-	-	-	-	0.950	-	Mlig455_025780 {REF} {Length: 11353} {TRANSSPLICED} {Pfam: Beige/BEACH domain [PF02138.20, score=401.6]; Domain of unknown function (DUF4704) [PF15787.7, score=278.4]; Domain of Unknown Function (DUF1088) [PF06469.13, score=220.0]; PH domain associated with Beige/BEACH [PF14844.8, score=85.4]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=43.5]; WD domain, G-beta repeat [PF00400.34, score=35.5]} {Human: ENSG00000198589, LRBA, LPS responsive beige-like anchor protein, [RH, Score=1306, Expect=0.0]; ENSG00000172915, NBEA, neurobeachin, [RH, Score=1291, Expect=0.0]} {Mouse: ENSMUSG00000028080, Lrba, LPS-responsive beige-like anchor, [RH, Score=1305, Expect=0.0]; ENSMUSG00000027799, Nbea, neurobeachin, [RH, Score=1290, Expect=0.0]} {Dmel: FBgn0266098, rg, rugose, [RH, Score=1776, Expect=0.0]} {Celegans: WBGene00004760, sel-2, Putative neurobeachin homolog, [RH, Score=1279, Expect=0.0]} {Smed: dd_Smed_v6_3880_0_1, dd_Smed_v6_3880_0_1, [RH, Score=2092, Expect=0.0]} {RNA1509_56158, RNA1509_57979} {RNA1310_1088.1, RNA1509_57979} {RNA1509_57979, RNA815_635}

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