TomoSeq data search

Data search

Results for MligTC455_26346

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26346	19	0.40	Mlig455_024813	Neo: - Age: -	NYNRIN	Mlig455_024813 {REF} {Length: 4045} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.5]; Major Facilitator Superfamily [PF07690.18, score=57.1]; Integrase core domain [PF00665.28, score=45.5]; Integrase zinc binding domain [PF17921.3, score=43.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=67.8, Expect=6e-11]} {Celegans: WBGene00017369, F10G7.5, [Score=93.6, Expect=1e-19]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=283, Expect=8e-81]} {RNA1509_22347} {RNA1310_15525.1} {RNA815_6340}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26346

0.40

Mlig455_024813

Neo: -

Age: -

NYNRIN

Mlig455_024813 {REF} {Length: 4045} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.5]; Major Facilitator Superfamily [PF07690.18, score=57.1]; Integrase core domain [PF00665.28, score=45.5]; Integrase zinc binding domain [PF17921.3, score=43.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=67.8, Expect=6e-11]} {Celegans: WBGene00017369, F10G7.5, [Score=93.6, Expect=1e-19]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=283, Expect=8e-81]} {RNA1509_22347} {RNA1310_15525.1} {RNA815_6340}

Cumulative graph for MligTC455_26346

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	9.949	0.612	0.99952	1.00000
RegionR2	-2.151	0.612	0.99950	1.00000
RegionR3	-2.665	0.612	0.99962	1.00000
RegionR4	3.745	0.612	0.99952	1.00000
RegionR5	-1.077	0.612	0.99968	1.00000
RegionR6	-2.707	0.612	0.99960	1.00000
RegionR7	-2.507	0.612	0.99953	1.00000
RegionR8	-2.587	0.612	0.99952	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.535	0.612	0.99990	1.00000
RegenerationR2	3.207	0.612	0.00977	0.15854
RegenerationR3	2.127	0.612	0.99981	1.00000
RegenerationR4	-2.288	0.612	0.99982	1.00000
RegenerationR5	1.786	0.612	0.99967	1.00000
RegenerationR6	1.843	0.612	1.00000	1.00000
RegenerationBL	3.024	0.612	0.99997	1.00000
RegenerationTP	-0.052	0.612	1.00000	1.00000

Genes with expression patterns similar to MligTC455_26346

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26346	19	0.4	Mlig455_024813	Neo: - Age: -	NYNRIN	1	1.000	-	-	-	-	-	Mlig455_024813 {REF} {Length: 4045} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.5]; Major Facilitator Superfamily [PF07690.18, score=57.1]; Integrase core domain [PF00665.28, score=45.5]; Integrase zinc binding domain [PF17921.3, score=43.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=67.8, Expect=6e-11]} {Celegans: WBGene00017369, F10G7.5, [Score=93.6, Expect=1e-19]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=283, Expect=8e-81]} {RNA1509_22347} {RNA1310_15525.1} {RNA815_6340}
2.	MligTC455_03024	21	0.44	Mlig455_059052	Neo: - Age: -		0.975	0.975	-	-	-	-	-	Mlig455_059052 {REF} {Length: 2443} {RNA1509_37050} {RNA1310_74404} {RNA815_50491.1}
3.	MligTC455_05822	11	0.24	Mlig455_054322, Mlig455_054334	Neo: - Age: -		0.965	0.965	-	-	-	-	-	Mlig455_054322 {REF} {Length: 1155} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.5]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=117, Expect=1e-30]} {RNA1310_64330} Mlig455_054334 {REF} {Length: 1102} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=47.6]} {Smed: dd_Smed_v6_11922_0_1, dd_Smed_v6_11922_0_1, [Score=106, Expect=2e-26]} {RNA1310_64330}
4.	MligTC455_09896	64	1.33	Mlig455_036651, Mlig455_036677	Neo: - Age: -		0.958	0.958	-	-	-	-	-	Mlig455_036651 {REF} {Length: 654} {RNA1310_143507} Mlig455_036677 {REF} {Length: 1205} {RNA1310_115592}
5.	MligTC455_39246	37	0.77	Mlig455_067040	Neo: - Age: -		0.957	0.957	-	-	-	-	-	Mlig455_067040 {REF} {Length: 1735} {RNA1509_47157} {RNA1310_150085} {RNA815_6917.1}
6.	MligTC455_01290	14	0.3	Mlig455_069398	Neo: - Age: -		0.952	0.952	-	-	-	-	-	Mlig455_069398 {REF} {Length: 269} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_26212}
7.	MligTC455_08938	38	0.79	Mlig455_030563	Neo: Germline Age: -		0.95	0.950	-	-	-	-	-	Mlig455_030563 {REF} {Length: 1076} {RNA1310_74944} {RNA815_42096}