Data search
Results for MligTC455_26430
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26430 | 1895 | 39.48 | Mlig455_047686 | Neo: - Age: Up-Down-Down |
VPS13C | Mlig455_047686 {REF} {Length: 4563} {Pfam: Vacuolar-sorting-associated 13 protein C-terminal [PF16909.7, score=172.3]; SHR-binding domain of vacuolar-sorting associated protein 13 [PF06650.14, score=71.6]} {Human: ENSG00000129003, VPS13C, vacuolar protein sorting 13 homolog C, [RH, Score=521, Expect=2e-156]} {Mouse: ENSMUSG00000035284, Vps13c, vacuolar protein sorting 13C, [Score=538, Expect=1e-162]} {Dmel: FBgn0033194, Vps13, Vacuolar protein sorting 13, [Score=495, Expect=3e-148]} {Celegans: WBGene00011629, T08G11.1, [RH, Score=413, Expect=2e-120]} {Smed: dd_Smed_v6_1648_0_1, dd_Smed_v6_1648_0_1, [Score=555, Expect=1e-168]} {RNA1509_14872} {RNA1310_3294.1, RNA1509_14872} {RNA1509_14872, RNA815_39.1} |
Cumulative graph for MligTC455_26430
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.242 | 5.447 | 0.01246 | 0.31858 | |
| RegionR2 | 0.431 | 5.447 | 0.22563 | 0.59616 | |
| RegionR3 | 0.44 | 5.447 | 0.13565 | 0.63038 | |
| RegionR4 | 0.095 | 5.447 | 0.79236 | 1.00000 | |
| RegionR5 | -0.008 | 5.447 | 0.98148 | 1.00000 | |
| RegionR6 | 0.17 | 5.447 | 0.58082 | 1.00000 | |
| RegionR7 | 0.504 | 5.447 | 0.13366 | 0.68773 | |
| RegionR8 | 0.611 | 5.447 | 0.10182 | 0.59751 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.745 | 5.447 | 0.59376 | 1.00000 | |
| RegenerationR2 | 0.129 | 5.447 | 0.68358 | 0.95001 | |
| RegenerationR3 | 0.193 | 5.447 | 0.57349 | 0.89544 | |
| RegenerationR4 | 0.123 | 5.447 | 0.73899 | 0.96738 | |
| RegenerationR5 | 0.22 | 5.447 | 0.51477 | 0.86697 | |
| RegenerationR6 | 0.133 | 5.447 | 0.70216 | 0.92544 | |
| RegenerationBL | -0.688 | 5.447 | 0.06818 | 0.30369 | |
| RegenerationTP | 0.073 | 5.447 | 0.84125 | 1.00000 |
Genes with expression patterns similar to MligTC455_26430
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26430 | 1895 | 39.48 | Mlig455_047686 | Neo: - Age: Up-Down-Down |
VPS13C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047686 {REF} {Length: 4563} {Pfam: Vacuolar-sorting-associated 13 protein C-terminal [PF16909.7, score=172.3]; SHR-binding domain of vacuolar-sorting associated protein 13 [PF06650.14, score=71.6]} {Human: ENSG00000129003, VPS13C, vacuolar protein sorting 13 homolog C, [RH, Score=521, Expect=2e-156]} {Mouse: ENSMUSG00000035284, Vps13c, vacuolar protein sorting 13C, [Score=538, Expect=1e-162]} {Dmel: FBgn0033194, Vps13, Vacuolar protein sorting 13, [Score=495, Expect=3e-148]} {Celegans: WBGene00011629, T08G11.1, [RH, Score=413, Expect=2e-120]} {Smed: dd_Smed_v6_1648_0_1, dd_Smed_v6_1648_0_1, [Score=555, Expect=1e-168]} {RNA1509_14872} {RNA1310_3294.1, RNA1509_14872} {RNA1509_14872, RNA815_39.1} |
| 2. | MligTC455_26429 | 2352 | 49.01 | Mlig455_031830 | Neo: - Age: Up-Down-Up |
VPS13C | 4.612 | 0.925 | 0.977 | 0.770 | 0.959 | 0.981 | - | Mlig455_031830 {REF} {Length: 3571} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=34.3]} {Human: ENSG00000129003, VPS13C, vacuolar protein sorting 13 homolog C, [Score=55.5, Expect=3e-07]; ENSG00000197969, VPS13A, vacuolar protein sorting 13 homolog A, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000035284, Vps13c, vacuolar protein sorting 13C, [Score=56.2, Expect=1e-07]} {Dmel: FBgn0033194, Vps13, Vacuolar protein sorting 13, [Score=59.3, Expect=9e-09]} {RNA1509_56944} {RNA1310_9435} {RNA815_39.1} |
| 3. | MligTC455_21874 | 283 | 5.89 | Mlig455_050795 | Neo: - Age: - |
CPNE8 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_050795 {REF} {Length: 3835} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=264.5]; C2 domain [PF00168.32, score=72.7]; vWA found in TerF C terminus [PF10138.11, score=35.0]} {Human: ENSG00000139117, CPNE8, copine 8, [RH, Score=480, Expect=6e-164]; ENSG00000124772, CPNE5, copine 5, [RH, Score=459, Expect=3e-155]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [RH, Score=481, Expect=2e-164]; ENSMUSG00000024008, Cpne5, copine V, [RH, Score=462, Expect=8e-157]; ENSMUSG00000030270, Cpne9, copine family member IX, [RH, Score=458, Expect=2e-155]} {Celegans: WBGene00001577, gem-4, Gon-2 Extragenic Modifier, [Score=355, Expect=5e-115]} {Smed: dd_Smed_v6_2149_0_4, dd_Smed_v6_2149_0_4, [Score=517, Expect=2e-178]} {RNA1509_10831, RNA1509_41274} {RNA1310_13946.1, RNA1509_10831, RNA1509_41274} {RNA1509_10831, RNA1509_41274, RNA815_5440} |
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