TomoSeq data search

Data search

Results for MligTC455_26453

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26453	2	0.05	Mlig455_029533	Neo: - Age: -	ABCA9	Mlig455_029533 {REF} {Length: 5505} {Pfam: ABC transporter [PF00005.29, score=68.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=57.7]; AAA domain [PF13476.8, score=25.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=21.3]; P-loop containing region of AAA domain [PF13555.8, score=20.0]} {Human: ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=125, Expect=6e-29]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=119, Expect=2e-27]} {Mouse: ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=121, Expect=4e-28]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=119, Expect=3e-27]; ENSMUSG00000051900, Abca16, ATP-binding cassette, sub-family A (ABC1), member 16, [Score=117, Expect=9e-27]; ENSMUSG00000044749, Abca6, ATP-binding cassette, sub-family A (ABC1), member 6, [Score=115, Expect=5e-26]} {Dmel: FBgn0261998, CG42816, [Score=97.4, Expect=2e-20]} {Celegans: WBGene00000421, ced-7, ABC transporter ced-7, [Score=94.0, Expect=1e-19]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=108, Expect=3e-24]} {RNA1509_15846} {RNA1310_1051.2} {RNA815_3241}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26453

0.05

Mlig455_029533

Neo: -

Age: -

ABCA9

Mlig455_029533 {REF} {Length: 5505} {Pfam: ABC transporter [PF00005.29, score=68.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=57.7]; AAA domain [PF13476.8, score=25.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=21.3]; P-loop containing region of AAA domain [PF13555.8, score=20.0]} {Human: ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=125, Expect=6e-29]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=119, Expect=2e-27]} {Mouse: ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=121, Expect=4e-28]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=119, Expect=3e-27]; ENSMUSG00000051900, Abca16, ATP-binding cassette, sub-family A (ABC1), member 16, [Score=117, Expect=9e-27]; ENSMUSG00000044749, Abca6, ATP-binding cassette, sub-family A (ABC1), member 6, [Score=115, Expect=5e-26]} {Dmel: FBgn0261998, CG42816, [Score=97.4, Expect=2e-20]} {Celegans: WBGene00000421, ced-7, ABC transporter ced-7, [Score=94.0, Expect=1e-19]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=108, Expect=3e-24]} {RNA1509_15846} {RNA1310_1051.2} {RNA815_3241}

Cumulative graph for MligTC455_26453

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_26453

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26453	2	0.05	Mlig455_029533	Neo: - Age: -	ABCA9	1	-	1.000	-	-	-	-	Mlig455_029533 {REF} {Length: 5505} {Pfam: ABC transporter [PF00005.29, score=68.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=57.7]; AAA domain [PF13476.8, score=25.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=21.3]; P-loop containing region of AAA domain [PF13555.8, score=20.0]} {Human: ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=125, Expect=6e-29]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=119, Expect=2e-27]} {Mouse: ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=121, Expect=4e-28]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=119, Expect=3e-27]; ENSMUSG00000051900, Abca16, ATP-binding cassette, sub-family A (ABC1), member 16, [Score=117, Expect=9e-27]; ENSMUSG00000044749, Abca6, ATP-binding cassette, sub-family A (ABC1), member 6, [Score=115, Expect=5e-26]} {Dmel: FBgn0261998, CG42816, [Score=97.4, Expect=2e-20]} {Celegans: WBGene00000421, ced-7, ABC transporter ced-7, [Score=94.0, Expect=1e-19]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=108, Expect=3e-24]} {RNA1509_15846} {RNA1310_1051.2} {RNA815_3241}
2.	MligTC455_40491	24	0.5	Mlig455_041137	Neo: - Age: -	PTPRG	0.978	-	0.978	-	-	-	-	Mlig455_041137 {REF} {Length: 7115} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=339.7]; Fibronectin type III domain [PF00041.23, score=71.0]; Immunoglobulin V-set domain [PF07686.19, score=25.7]} {Human: ENSG00000144724, PTPRG, protein tyrosine phosphatase, receptor type G, [Score=392, Expect=2e-113]; ENSG00000106278, PTPRZ1, protein tyrosine phosphatase, receptor type Z1, [Score=391, Expect=5e-113]} {Mouse: ENSMUSG00000068748, Ptprz1, protein tyrosine phosphatase, receptor type Z, polypeptide 1, [Score=386, Expect=1e-109]; ENSMUSG00000021745, Ptprg, protein tyrosine phosphatase, receptor type, G, [Score=386, Expect=3e-111]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=374, Expect=4e-111]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=267, Expect=2e-73]} {Smed: dd_Smed_v6_6997_0_1, dd_Smed_v6_6997_0_1, [Score=412, Expect=5e-121]} {RNA1509_916} {RNA1310_85242} {RNA815_3896}
3.	MligTC455_25318	85	1.77	Mlig455_022125	Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 3.046/0.02891		0.973	-	0.973	-	-	-	-	Mlig455_022125 {REF} {Length: 2145} {RNA1509_17391} {RNA1310_28598} {RNA815_31621}
4.	MligTC455_48465	15	0.31	Mlig455_062434	Neo: - Age: - Regeneration-downregulated R4: -5.662 Regeneration-depleted R4: -5.662		0.97	-	0.970	-	-	-	-	Mlig455_062434 {REF} {Length: 954} {RNA1509_6520} {RNA1310_26074.1} {RNA815_12069.1}
5.	MligTC455_02035	6	0.12	Mlig455_021653	Neo: - Age: -		0.961	-	0.961	-	-	-	-	Mlig455_021653 {REF} {Length: 1140} {RNA1509_55222} {RNA1310_10626} {RNA815_87.1}
6.	MligTC455_00760	14	0.3	Mlig455_016164	Neo: - Age: -		0.954	-	0.954	-	-	-	-	Mlig455_016164 {REF} {Length: 1102} {RNA1310_117525} {RNA815_52441}
7.	MligTC455_34175	8	0.17	Mlig455_026522, Mlig455_035627	Neo: - Age: -	GVQW3, PRR9	0.951	-	0.951	-	-	-	-	Mlig455_026522 {REF} {Length: 1841} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=51.2, Expect=9e-09]} {RNA1509_57191} {RNA1310_32310.1} {RNA815_10095.1} Mlig455_035627 {REF} {Length: 728} {Pfam: Homeodomain-like domain [PF13384.8, score=38.9]; Homeodomain-like domain [PF13565.8, score=33.2]; IclR helix-turn-helix domain [PF09339.12, score=30.0]; Winged helix-turn helix [PF13551.8, score=29.4]; HTH domain in Mos1 transposase [PF17906.3, score=29.1]; Winged helix-turn-helix DNA-binding [PF13412.8, score=28.7]; Helix-turn-helix domain [PF13936.8, score=25.1]; AsnC-type helix-turn-helix domain [PF13404.8, score=23.1]; Bacterial regulatory protein, arsR family [PF01022.22, score=19.0]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=60.1, Expect=1e-11]} {RNA1509_57191} {RNA1310_32310.1} {RNA815_553}