Data search
Results for MligTC455_26456
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26456 | 246 | 5.12 | Mlig455_012235 | Neo: - Age: - |
PRKDC | Mlig455_012235 {REF} {Length: 2343} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=110.8]; FATC domain [PF02260.22, score=28.3]} {Human: ENSG00000253729, PRKDC, protein kinase, DNA-activated, catalytic subunit, [Score=189, Expect=2e-52]} {Mouse: ENSMUSG00000022672, Prkdc, protein kinase, DNA activated, catalytic polypeptide, [Score=190, Expect=3e-53]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [Score=89.7, Expect=4e-19]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [Score=93.6, Expect=2e-20]} {Smed: dd_Smed_v6_8462_0_1, dd_Smed_v6_8462_0_1, [Score=143, Expect=1e-37]} {RNA1509_35967} {RNA1310_372} {RNA815_7114} |
Cumulative graph for MligTC455_26456
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.446 | 2.957 | 0.56352 | 1.00000 | |
| RegionR2 | 0.716 | 2.957 | 0.36442 | 0.75895 | |
| RegionR3 | 0.263 | 2.957 | 0.69261 | 1.00000 | |
| RegionR4 | 0.505 | 2.957 | 0.49431 | 0.82085 | |
| RegionR5 | 0.993 | 2.957 | 0.07934 | 0.26046 | |
| RegionR6 | 0.392 | 2.957 | 0.56726 | 1.00000 | |
| RegionR7 | -1.736 | 2.957 | 0.18802 | 0.79066 | |
| RegionR8 | 0.313 | 2.957 | 0.78215 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.053 | 2.957 | 0.55835 | 1.00000 | |
| RegenerationR2 | 0.271 | 2.957 | 0.60465 | 0.91751 | |
| RegenerationR3 | 1.24 | 2.957 | 0.04612 | 0.37440 | |
| RegenerationR4 | 0.035 | 2.957 | 0.95946 | 1.00000 | |
| RegenerationR5 | 0.462 | 2.957 | 0.38512 | 0.78910 | |
| RegenerationR6 | 1.276 | 2.957 | 0.03743 | 0.24127 | |
| RegenerationBL | 0.435 | 2.957 | 0.65313 | 0.98939 | |
| RegenerationTP | 0.892 | 2.957 | 0.39847 | 0.82806 |
Genes with expression patterns similar to MligTC455_26456
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26456 | 246 | 5.12 | Mlig455_012235 | Neo: - Age: - |
PRKDC | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012235 {REF} {Length: 2343} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=110.8]; FATC domain [PF02260.22, score=28.3]} {Human: ENSG00000253729, PRKDC, protein kinase, DNA-activated, catalytic subunit, [Score=189, Expect=2e-52]} {Mouse: ENSMUSG00000022672, Prkdc, protein kinase, DNA activated, catalytic polypeptide, [Score=190, Expect=3e-53]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [Score=89.7, Expect=4e-19]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [Score=93.6, Expect=2e-20]} {Smed: dd_Smed_v6_8462_0_1, dd_Smed_v6_8462_0_1, [Score=143, Expect=1e-37]} {RNA1509_35967} {RNA1310_372} {RNA815_7114} |
| 2. | MligTC455_26455 | 199 | 4.14 | Mlig455_012225 | Neo: Irradiation Age: - |
PRKDC | 5.753 | 0.988 | 0.995 | 0.856 | 0.976 | 0.960 | 0.978 | Mlig455_012225 {REF} {Length: 13583} {Pfam: NUC194 domain [PF08163.14, score=231.8]; DNA-PKcs, CC5 [PF19704.1, score=216.9]; Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=144.6]; FAT domain [PF02259.25, score=33.4]; FATC domain [PF02260.22, score=25.0]} {Human: ENSG00000253729, PRKDC, protein kinase, DNA-activated, catalytic subunit, [Score=381, Expect=7e-105]} {Mouse: ENSMUSG00000022672, Prkdc, protein kinase, DNA activated, catalytic polypeptide, [Score=509, Expect=5e-144]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [Score=157, Expect=2e-37]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [Score=157, Expect=2e-37]} {Smed: dd_Smed_v6_8462_0_2, dd_Smed_v6_8462_0_2, [RH, Score=281, Expect=3e-75]} {RNA1509_11402} {RNA1310_301.1} {RNA815_3968} |
| 3. | MligTC455_41754 | 607 | 12.65 | Mlig455_015696 | Neo: - Age: logFC(26M/2M)=0.671 |
RBBP5 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_015696 {REF} {Length: 1966} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=51.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.0]} {Human: ENSG00000117222, RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000026439, Rbbp5, retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0036973, Rbbp5, Retinoblastoma binding protein 5, [RH, Score=562, Expect=0.0]} {Celegans: WBGene00017683, rbbp-5, Retinoblastoma-binding protein homolog 5, [RH, Score=300, Expect=3e-96]} {Smed: dd_Smed_v6_4897_0_1, dd_Smed_v6_4897_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_24461} {RNA1310_14133} {RNA815_5169} |
| 4. | MligTC455_27765 | 336 | 7 | Mlig455_046449 | Neo: - Age: logFC(26M/2M)=-0.267 |
USP24 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_046449 {REF} {Length: 8444} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=146.4]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=61.7]} {Human: ENSG00000162402, USP24, ubiquitin specific peptidase 24, [Score=385, Expect=4e-107]} {Mouse: ENSMUSG00000028514, Usp24, ubiquitin specific peptidase 24, [Score=384, Expect=7e-107]} {Dmel: FBgn0005632, faf, fat facets, [Score=256, Expect=8e-68]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_2963_0_1, dd_Smed_v6_2963_0_1, [Score=242, Expect=6e-64]} {RNA1509_2363, RNA1509_29997} {RNA1310_218.1, RNA1509_29997} {RNA1509_29997, RNA815_823} |
| 5. | MligTC455_42998 | 572 | 11.92 | Mlig455_034400 | Neo: - Age: - Region-enriched R5: 2.221/0.01821 Regeneration-upregulated BL: 5.235 Regeneration-enriched BL: 5.235 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_034400 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_12731} {RNA1310_34600} {RNA815_16012} | |
| 6. | MligTC455_25218 | 1025 | 21.35 | Mlig455_021728 | Neo: - Age: - |
APC | 0.952 | - | - | - | 0.952 | - | - | Mlig455_021728 {REF} {Length: 7056} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=36.0]; SAMP Motif [PF05924.13, score=24.0]} {Human: ENSG00000134982, APC, APC, WNT signaling pathway regulator, [RH, Score=284, Expect=4e-76]; ENSG00000115266, APC2, APC2, WNT signaling pathway regulator, [RH, Score=270, Expect=4e-72]} {Mouse: ENSMUSG00000005871, Apc, adenomatosis polyposis coli, [RH, Score=283, Expect=6e-76]; ENSMUSG00000020135, Apc2, adenomatosis polyposis coli 2, [RH, Score=272, Expect=8e-73]} {Dmel: FBgn0015589, Apc, APC-like, [RH, Score=265, Expect=2e-70]} {Celegans: WBGene00000156, apr-1, Adenomatous polyposis coli protein-related protein 1, [RH, Score=124, Expect=6e-28]} {Smed: dd_Smed_v6_6966_0_1, dd_Smed_v6_6966_0_1, [RH, Score=235, Expect=5e-62]} {RNA1509_26796, RNA1509_3590} {RNA1310_116.2, RNA1509_26796} {RNA1509_26796, RNA815_4707} |
| 7. | MligTC455_45755 | 1686 | 35.12 | Mlig455_056541 | Neo: - Age: logFC(26M/2M)=0.434 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_056541 {REF} {Length: 1559} {TRANSSPLICED} {Pfam: Xylose isomerase-like TIM barrel [PF01261.26, score=31.8]} {RNA1509_6228} {RNA1310_7664.2, RNA1509_6228} {RNA1509_6228, RNA815_8469} | |
| 8. | MligTC455_22965 | 433 | 9.03 | Mlig455_019042 | Neo: - Age: Down-Down-Up |
0.95 | - | - | - | - | - | 0.950 | Mlig455_019042 {REF} {Length: 1514} {Pfam: Sleepless protein [PF17064.7, score=26.9]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=69.3, Expect=1e-15]} {RNA1509_27313, RNA1509_54222} {RNA1310_27569.1, RNA1509_54222} {RNA1509_54222, RNA815_11340} |
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