Data search


search
Exact
Search

Results for MligTC455_26517

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26517 54 1.13 Mlig455_050870, Mlig455_053969

Neo: -

Age: logFC(26M/2M)=-0.514

Mlig455_050870 {REF} {Length: 3430} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=32.7]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=152, Expect=9e-42]} {RNA1509_35362} {RNA1310_8376} {RNA815_4529}

Mlig455_053969 {REF} {Length: 989} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=74.2]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=51.6, Expect=3e-07]} {RNA1509_35362} {RNA1310_21423.2} {RNA815_13686}

Cumulative graph for MligTC455_26517

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.86 1.486 0.99977 1.00000
RegionR2 0.475 1.486 0.63983 0.97772
RegionR3 0.255 1.486 0.69542 1.00000
RegionR4 2.333 1.486 0.12568 0.35777
RegionR5 0.011 1.486 0.77833 1.00000
RegionR6 1.262 1.486 0.31142 0.90125
RegionR7 2.181 1.486 0.11264 0.63644
RegionR8 -3.657 1.486 0.99986 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.553 1.486 1.00000 1.00000
RegenerationR2 0.324 1.486 0.67524 0.94728
RegenerationR3 0.069 1.486 0.96066 1.00000
RegenerationR4 -1.352 1.486 0.24238 0.69059
RegenerationR5 -0.279 1.486 0.82160 0.99482
RegenerationR6 -0.492 1.486 0.60675 0.87230
RegenerationBL 0.3 1.486 0.73775 1.00000
RegenerationTP -0.311 1.486 0.84056 1.00000


Genes with expression patterns similar to MligTC455_26517

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26517 54 1.13 Mlig455_050870, Mlig455_053969

Neo: -

Age: logFC(26M/2M)=-0.514

5 1.000 1.000 1.000 1.000 1.000 -

Mlig455_050870 {REF} {Length: 3430} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=32.7]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=152, Expect=9e-42]} {RNA1509_35362} {RNA1310_8376} {RNA815_4529}

Mlig455_053969 {REF} {Length: 989} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=74.2]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=51.6, Expect=3e-07]} {RNA1509_35362} {RNA1310_21423.2} {RNA815_13686}
2. MligTC455_47769 70 1.46 Mlig455_034062

Neo: -

Age: Down-Down-Up

CHRNA6 1.822 - - 0.832 - 0.990 - Mlig455_034062 {REF} {Length: 2693} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.9]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=199, Expect=3e-57]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=195, Expect=8e-56]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=190, Expect=3e-54]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=200, Expect=6e-58]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=198, Expect=3e-57]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=193, Expect=1e-55]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=190, Expect=5e-54]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=206, Expect=2e-59]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=200, Expect=1e-57]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=195, Expect=4e-56]} {RNA1310_10964.1} {RNA815_16260.1}
3. MligTC455_53190 105 2.18 Mlig455_013516

Neo: -

Age: -

SCNN1B 1.723 - - 0.950 - 0.773 - Mlig455_013516 {REF} {Length: 2819} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=290.8]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=158, Expect=8e-41]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=149, Expect=1e-37]} {Dmel: FBgn0051105, ppk22, pickpocket 22, [RH, Score=60.1, Expect=3e-09]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [RH, Score=166, Expect=2e-43]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [RH, Score=186, Expect=1e-51]} {RNA1509_18670} {RNA1310_20526} {RNA815_9932}
4. MligTC455_29109 90 1.88 Mlig455_057258

Neo: -

Age: -

1.672 - - 0.715 - 0.957 - Mlig455_057258 {REF} {Length: 2483} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_21788} {RNA815_10097}
5. MligTC455_46403 73 1.53 Mlig455_020746

Neo: -

Age: -

1.652 - - 0.702 - 0.950 - Mlig455_020746 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_47399.1} {RNA815_38310}
6. MligTC455_37325 21 0.45 Mlig455_053385

Neo: -

Age: -

0.985 - - - - 0.985 - Mlig455_053385 {REF} {Length: 347} {NoTransDecoderORF} {RNA1509_46225} {RNA1310_43662}
7. MligTC455_36685 249 5.19 Mlig455_011304, Mlig455_022484, Mlig455_038580, Mlig455_053177, Mlig455_053195, Mlig455_054147, Mlig455_057048

Neo: -

Age: -

0.974 - - 0.974 - - -

Mlig455_011304 {REF} {Length: 2066} {RNA1310_36097} {RNA815_32539}

Mlig455_022484 {REF} {Length: 1980} {RNA1310_36097} {RNA815_32539}

Mlig455_038580 {REF} {Length: 1727} {RNA1310_36097} {RNA815_32539}

Mlig455_053177 {REF} {Length: 1901} {RNA1310_36097} {RNA815_32539}

Mlig455_053195 {REF} {Length: 1903} {RNA1310_36097} {RNA815_32539}

Mlig455_054147 {REF} {Length: 709} {RNA1310_36097} {RNA815_32539}

Mlig455_057048 {REF} {Length: 2030} {RNA1310_36097} {RNA815_32539}
8. MligTC455_45968 43 0.89 Mlig455_058916

Neo: -

Age: -

0.97 - - 0.970 - - - Mlig455_058916 {REF} {Length: 3026} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=53.9]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=29.4]} {Smed: dd_Smed_v6_27761_0_1, dd_Smed_v6_27761_0_1, [RH, Score=105, Expect=7e-25]} {RNA1310_38706}
9. MligTC455_46109 27 0.56 Mlig455_015554

Neo: -

Age: -

0.969 - - 0.969 - - - Mlig455_015554 {REF} {Length: 2498} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.8]} {Celegans: WBGene00019445, frpr-12, FMRFamide Peptide Receptor family, [Score=48.9, Expect=4e-06]} {Smed: dd_Smed_v6_21110_0_1, dd_Smed_v6_21110_0_1, [Score=202, Expect=1e-60]} {RNA1310_42800} {RNA815_34794}
10. MligTC455_32440 58 1.2 Mlig455_067621

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.071

0.965 - - 0.965 - - - Mlig455_067621 {REF} {Length: 7695} {RNA1509_1845} {RNA1310_50.1} {RNA815_5933}
11. MligTC455_09856 56 1.16 Mlig455_004506

Neo: -

Age: -

0.964 - - 0.964 - - - Mlig455_004506 {REF} {Length: 2446} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=52.1]} {Smed: dd_Smed_v6_33283_0_1, dd_Smed_v6_33283_0_1, [RH, Score=285, Expect=2e-92]} {RNA1509_53276} {RNA1310_19363, RNA1509_53276} {RNA1509_53276, RNA815_23430}
12. MligTC455_36639 17 0.35 Mlig455_054487

Neo: -

Age: -

0.962 - - - - 0.962 - Mlig455_054487 {REF} {Length: 3547} {RNA1509_42521} {RNA1310_16590} {RNA815_20255}
13. MligTC455_46234 18 0.38 Mlig455_036321

Neo: -

Age: -

0.962 - - 0.962 - - - Mlig455_036321 {REF} {Length: 2256} {Pfam: Glycine rich protein family [PF07172.13, score=21.7]} {RNA1310_96230}
14. MligTC455_48313 203 4.23 Mlig455_007201

Neo: -

Age: -

SVOP 0.962 - - - 0.962 - - Mlig455_007201 {REF} {Length: 2102} {Pfam: Sugar (and other) transporter [PF00083.26, score=116.0]; Major Facilitator Superfamily [PF07690.18, score=106.0]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=302, Expect=3e-96]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=297, Expect=3e-94]} {Dmel: FBgn0034956, CG4324, [Score=251, Expect=2e-77]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=285, Expect=2e-90]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=313, Expect=1e-101]} {RNA1509_56107} {RNA1310_12870} {RNA815_26584}
15. MligTC455_24032 164 3.42 Mlig455_001002

Neo: -

Age: Up-Down-Down

DSCAML1 0.961 - - - - 0.961 - Mlig455_001002 {REF} {Length: 8646} {Pfam: Immunoglobulin domain [PF13927.8, score=141.9]; Fibronectin type III domain [PF00041.23, score=127.5]; Immunoglobulin I-set domain [PF07679.18, score=114.8]; Immunoglobulin domain [PF13895.8, score=78.5]; Immunoglobulin domain [PF00047.27, score=75.8]; Immunoglobulin V-set domain [PF07686.19, score=48.9]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [Score=140, Expect=3e-32]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [Score=138, Expect=8e-32]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=170, Expect=9e-42]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=86.3, Expect=3e-16]} {Smed: dd_Smed_v6_3024_0_2, dd_Smed_v6_3024_0_2, [Score=287, Expect=2e-77]} {RNA1509_57897, RNA1509_9070} {RNA1310_454.1, RNA1509_57897, RNA1509_9070} {RNA1509_57897, RNA1509_9070, RNA815_227}
16. MligTC455_29108 43 0.9 Mlig455_052031

Neo: -

Age: logFC(26M/2M)=-0.764

0.961 - - - - 0.961 - Mlig455_052031 {REF} {Length: 3111} {NoTransDecoderORF} {RNA1310_19531.2} {RNA815_10097}
17. MligTC455_46429 48 1 Mlig455_042128

Neo: -

Age: -

0.958 - - 0.958 - - - Mlig455_042128 {REF} {Length: 1428} {Pfam: F5/8 type C domain [PF00754.27, score=33.1]} {RNA1310_65361} {RNA815_33677}
18. MligTC455_31978 17 0.36 Mlig455_065471

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_065471 {REF} {Length: 1840} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=23.5]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=65.9, Expect=7e-12]} {RNA1509_46373} {RNA1310_112946} {RNA815_7856.1}
19. MligTC455_49697 47 0.97 Mlig455_004472

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.634

Region-enriched R2: 5.369/0.00560

SVOP 0.954 - - 0.954 - - - Mlig455_004472 {REF} {Length: 3727} {Pfam: Major Facilitator Superfamily [PF07690.18, score=79.8]; Sugar (and other) transporter [PF00083.26, score=79.5]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=223, Expect=8e-66]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=206, Expect=1e-59]} {Dmel: FBgn0034956, CG4324, [Score=164, Expect=8e-45]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=193, Expect=2e-55]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=179, Expect=1e-50]} {RNA1509_47809} {RNA1310_13019, RNA1509_47809} {RNA1509_47809, RNA815_31681}
20. MligTC455_05878 31 0.65 Mlig455_068681

Neo: -

Age: -

WSCD1 0.953 - - - - 0.953 - Mlig455_068681 {REF} {Length: 1260} {Pfam: WSC domain [PF01822.21, score=62.3]} {Human: ENSG00000179314, WSCD1, WSC domain containing 1, [Score=49.7, Expect=1e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.2, Expect=5e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=65.5, Expect=3e-12]} {RNA1310_48464} {RNA815_29418}
21. MligTC455_14659 29 0.6 Mlig455_008399

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_008399 {REF} {Length: 613} {NoTransDecoderORF} {RNA1509_54373} {RNA1310_125370}
22. MligTC455_23142 769 16.02 Mlig455_008044

Neo: -

Age: -

INSR 0.951 - - - - 0.951 - Mlig455_008044 {REF} {Length: 5353} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=291.8]; Protein kinase domain [PF00069.27, score=128.4]; Receptor L domain [PF01030.26, score=118.4]; Furin-like cysteine rich region [PF00757.22, score=79.0]; Fibronectin type III domain [PF00041.23, score=45.0]; Growth factor receptor domain IV [PF14843.8, score=19.9]} {Human: ENSG00000171105, INSR, insulin receptor, [RH, Score=647, Expect=0.0]} {Mouse: ENSMUSG00000005534, Insr, insulin receptor, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0283499, InR, Insulin-like receptor, [RH, Score=333, Expect=8e-93]} {Celegans: WBGene00000898, daf-2, Insulin-like receptor Insulin-like receptor subunit alpha Insulin-like receptor subunit beta, [RH, Score=474, Expect=3e-140]} {Smed: dd_Smed_v6_9006_0_1, dd_Smed_v6_9006_0_1, [RH, Score=514, Expect=3e-157]} {RNA1509_5152} {RNA1310_762.1} {RNA815_285.1}
23. MligTC455_50185 86 1.8 Mlig455_054807

Neo: -

Age: Up-Up-Down

0.951 - - - - 0.951 - Mlig455_054807 {REF} {Length: 2456} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=19.4]} {RNA1509_43700} {RNA1310_8429} {RNA815_11541}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA