TomoSeq data search

Data search

Results for MligTC455_47769

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47769

70

1.46

Mlig455_034062

Neo: -

Age: Down-Down-Up

CHRNA6

Mlig455_034062 {REF} {Length: 2693} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.9]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=199, Expect=3e-57]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=195, Expect=8e-56]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=190, Expect=3e-54]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=200, Expect=6e-58]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=198, Expect=3e-57]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=193, Expect=1e-55]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=190, Expect=5e-54]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=206, Expect=2e-59]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=200, Expect=1e-57]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=195, Expect=4e-56]} {RNA1310_10964.1} {RNA815_16260.1}

Cumulative graph for MligTC455_47769

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.046	1.422	0.99969	1.00000
RegionR2	2.696	1.422	0.07242	0.32841
RegionR3	0.149	1.422	0.76325	1.00000
RegionR4	-1.304	1.422	0.98255	1.00000
RegionR5	0.141	1.422	0.75357	1.00000
RegionR6	2.258	1.422	0.07846	0.51874
RegionR7	1.578	1.422	0.35103	0.98724
RegionR8	-2.473	1.422	0.99961	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.764	1.422	0.99996	1.00000
RegenerationR2	-0.647	1.422	0.37782	0.80032
RegenerationR3	0.947	1.422	0.48362	0.85214
RegenerationR4	1.679	1.422	0.15694	0.58834
RegenerationR5	0.832	1.422	0.45005	0.83096
RegenerationR6	0.355	1.422	0.76828	0.96095
RegenerationBL	0.001	1.422	0.81990	1.00000
RegenerationTP	2.714	1.422	0.23275	0.67812

Genes with expression patterns similar to MligTC455_47769

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47769	70	1.46	Mlig455_034062	Neo: - Age: Down-Down-Up	CHRNA6	4	-	-	1.000	1.000	1.000	1.000	Mlig455_034062 {REF} {Length: 2693} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.9]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=199, Expect=3e-57]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=195, Expect=8e-56]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=190, Expect=3e-54]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=200, Expect=6e-58]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=198, Expect=3e-57]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=193, Expect=1e-55]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=190, Expect=5e-54]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=206, Expect=2e-59]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=200, Expect=1e-57]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=195, Expect=4e-56]} {RNA1310_10964.1} {RNA815_16260.1}
2.	MligTC455_26517	54	1.13	Mlig455_050870, Mlig455_053969	Neo: - Age: logFC(26M/2M)=-0.514		1.822	-	-	0.832	-	0.990	-	Mlig455_050870 {REF} {Length: 3430} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=32.7]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=152, Expect=9e-42]} {RNA1509_35362} {RNA1310_8376} {RNA815_4529} Mlig455_053969 {REF} {Length: 989} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=74.2]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=51.6, Expect=3e-07]} {RNA1509_35362} {RNA1310_21423.2} {RNA815_13686}
3.	MligTC455_52886	457	9.52	Mlig455_060949	Neo: - Age: logFC(26M/2M)=0.945		1.794	-	-	-	0.958	0.836	-	Mlig455_060949 {REF} {Length: 1307} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=70.7]; Kazal-type serine protease inhibitor domain [PF07648.17, score=62.7]} {Dmel: FBgn0052354, CG32354, [Score=48.1, Expect=3e-06]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=49.7, Expect=6e-07]} {RNA1509_43736} {RNA1310_25866.2} {RNA815_10610.1}
4.	MligTC455_47770	39	0.81	Mlig455_060420	Neo: - Age: -	CHRNA9	1.777	-	-	0.795	0.982	-	-	Mlig455_060420 {REF} {Length: 2482} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=131.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.8]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=202, Expect=2e-58]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=199, Expect=4e-57]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=199, Expect=1e-56]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=196, Expect=2e-56]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=196, Expect=1e-55]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=196, Expect=1e-55]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=195, Expect=3e-55]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=207, Expect=4e-60]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=206, Expect=6e-60]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=199, Expect=1e-57]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=199, Expect=9e-57]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=197, Expect=4e-56]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=213, Expect=2e-61]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=206, Expect=1e-59]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=204, Expect=8e-59]} {RNA1310_10964.1} {RNA815_21155}
5.	MligTC455_37325	21	0.45	Mlig455_053385	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_053385 {REF} {Length: 347} {NoTransDecoderORF} {RNA1509_46225} {RNA1310_43662}
6.	MligTC455_13778	74	1.55	Mlig455_057444	Neo: - Age: Up-Down-Down	FGG	0.962	-	-	-	-	-	0.962	Mlig455_057444 {REF} {Length: 1868} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=112.2]} {Human: ENSG00000171557, FGG, fibrinogen gamma chain, [Score=96.3, Expect=4e-22]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=94.4, Expect=3e-21]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=92.4, Expect=1e-20]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=92.0, Expect=2e-20]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=97.4, Expect=2e-22]} {Dmel: FBgn0003326, sca, scabrous, [Score=84.0, Expect=7e-18]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=72.8, Expect=2e-14]} {RNA1509_51521} {RNA1310_49947} {RNA815_34508}
7.	MligTC455_36639	17	0.35	Mlig455_054487	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_054487 {REF} {Length: 3547} {RNA1509_42521} {RNA1310_16590} {RNA815_20255}
8.	MligTC455_31978	17	0.36	Mlig455_065471	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_065471 {REF} {Length: 1840} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=23.5]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=65.9, Expect=7e-12]} {RNA1509_46373} {RNA1310_112946} {RNA815_7856.1}
9.	MligTC455_50975	173	3.6	Mlig455_014388	Neo: - Age: Down-Up-Up	CHRNB3	0.959	-	-	-	0.959	-	-	Mlig455_014388 {REF} {Length: 1742} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=101.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=23.6]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=110, Expect=4e-26]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=108, Expect=2e-25]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=107, Expect=5e-25]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=9e-25]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=7e-25]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=105, Expect=2e-24]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=114, Expect=5e-28]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=107, Expect=2e-25]} {Celegans: WBGene00000955, des-2, Acetylcholine receptor subunit alpha-type des-2, [Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_26232_0_1, dd_Smed_v6_26232_0_1, [Score=157, Expect=2e-43]} {RNA1310_54548} {RNA815_33490}
10.	MligTC455_37262	141	2.93	Mlig455_020634	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_020634 {REF} {Length: 1702} {RNA1509_58758} {RNA1310_66307} {RNA815_948.1}
11.	MligTC455_22503	206	4.29	Mlig455_013995	Neo: - Age: -	NAXE	0.953	-	-	0.953	-	-	-	Mlig455_013995 {REF} {Length: 2090} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=113.5]} {Human: ENSG00000163382, NAXE, NAD(P)HX epimerase, [Score=229, Expect=6e-72]} {Mouse: ENSMUSG00000028070, Naxe, NAD(P)HX epimerase, [Score=231, Expect=9e-73]} {Dmel: FBgn0030178, CG2974, [Score=194, Expect=1e-59]} {Celegans: WBGene00012476, Y18D10A.3, NAD(P)H-hydrate epimerase, [Score=165, Expect=9e-47]} {Smed: dd_Smed_v6_9067_0_1, dd_Smed_v6_9067_0_1, [Score=219, Expect=1e-68]} {RNA1509_45350} {RNA1310_22217.1} {RNA815_13669}
12.	MligTC455_14659	29	0.6	Mlig455_008399	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_008399 {REF} {Length: 613} {NoTransDecoderORF} {RNA1509_54373} {RNA1310_125370}
13.	MligTC455_46403	73	1.53	Mlig455_020746	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_020746 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_47399.1} {RNA815_38310}

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