Data search
Results for MligTC455_26589
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26589 | 24 | 0.50 | Mlig455_058296 | Neo: - Age: Down-Up-Down |
Mlig455_058296 {REF} {Length: 3207} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=22.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.2]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=109, Expect=5e-25]} {RNA1509_42704} {RNA1310_21353.1} {RNA815_9313} |
Cumulative graph for MligTC455_26589
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -8.933 | 0.783 | 0.05079 | 0.53010 | |
| RegionR2 | 7.229 | 0.783 | 0.00861 | 0.09182 | |
| RegionR3 | 2.642 | 0.783 | 0.33570 | 0.87281 | |
| RegionR4 | -3.802 | 0.783 | 0.22810 | 0.52058 | |
| RegionR5 | -0.458 | 0.783 | 0.89304 | 1.00000 | |
| RegionR6 | 1.02 | 0.783 | 0.87846 | 1.00000 | |
| RegionR7 | 1.946 | 0.783 | 0.56879 | 1.00000 | |
| RegionR8 | 0.357 | 0.783 | 0.91731 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.21 | 0.783 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.939 | 0.783 | 0.86849 | 1.00000 | |
| RegenerationR3 | 3.144 | 0.783 | 0.25201 | 0.68639 | |
| RegenerationR4 | 2.644 | 0.783 | 0.35975 | 0.78706 | |
| RegenerationR5 | 0.742 | 0.783 | 0.89250 | 1.00000 | |
| RegenerationR6 | 3.171 | 0.783 | 0.28544 | 0.63559 | |
| RegenerationBL | -0.024 | 0.783 | 0.99948 | 1.00000 | |
| RegenerationTP | 2.463 | 0.783 | 0.73160 | 1.00000 |
Genes with expression patterns similar to MligTC455_26589
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26589 | 24 | 0.5 | Mlig455_058296 | Neo: - Age: Down-Up-Down |
1 | - | - | - | - | 1.000 | - | Mlig455_058296 {REF} {Length: 3207} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=22.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.2]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=109, Expect=5e-25]} {RNA1509_42704} {RNA1310_21353.1} {RNA815_9313} | |
| 2. | MligTC455_27071 | 76 | 1.58 | Mlig455_049246 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_049246 {REF} {Length: 382} {NoTransDecoderORF} {RNA1509_42914} {RNA1310_59969} {RNA815_64986} | |
| 3. | MligTC455_15685 | 62 | 1.3 | Mlig455_011329 | Neo: - Age: - |
NOTCH4 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_011329 {REF} {Length: 1536} {Pfam: EGF-like domain [PF00008.29, score=24.1]} {Human: ENSG00000232339, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000206312, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000223355, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000234876, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000204301, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000235396, NOTCH4, notch 4, [Score=52.4, Expect=2e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=52.0, Expect=2e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=53.5, Expect=5e-08]; ENSMUSG00000026923, Notch1, notch 1, [Score=52.0, Expect=2e-07]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710} |
Berezikov Lab - 2020-2021 © ERIBA