TomoSeq data search

Data search

Results for MligTC455_15685

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_15685	62	1.30	Mlig455_011329	Neo: - Age: -	NOTCH4	Mlig455_011329 {REF} {Length: 1536} {Pfam: EGF-like domain [PF00008.29, score=24.1]} {Human: ENSG00000232339, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000206312, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000223355, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000234876, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000204301, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000235396, NOTCH4, notch 4, [Score=52.4, Expect=2e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=52.0, Expect=2e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=53.5, Expect=5e-08]; ENSMUSG00000026923, Notch1, notch 1, [Score=52.0, Expect=2e-07]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_15685

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.975	1.198	0.99981	1.00000
RegionR2	0.877	1.198	0.31193	0.70283
RegionR3	-1.404	1.198	0.99986	1.00000
RegionR4	0.72	1.198	0.99982	1.00000
RegionR5	-0.291	1.198	0.99986	1.00000
RegionR6	0.844	1.198	0.26482	0.85260
RegionR7	3.342	1.198	0.01092	0.18161
RegionR8	-1.113	1.198	0.99993	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.163	1.198	1.00000	1.00000
RegenerationR2	0.545	1.198	0.60156	0.91641
RegenerationR3	2.401	1.198	0.12008	0.53828
RegenerationR4	1.246	1.198	0.18185	0.62231
RegenerationR5	1.33	1.198	0.19936	0.63196
RegenerationR6	0.393	1.198	0.85628	1.00000
RegenerationBL	0.373	1.198	0.79839	1.00000
RegenerationTP	2.464	1.198	0.34450	0.78718

Genes with expression patterns similar to MligTC455_15685

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15685	62	1.3	Mlig455_011329	Neo: - Age: -	NOTCH4	4	-	-	1.000	1.000	1.000	1.000	Mlig455_011329 {REF} {Length: 1536} {Pfam: EGF-like domain [PF00008.29, score=24.1]} {Human: ENSG00000232339, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000206312, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000223355, NOTCH4, notch 4, [Score=54.3, Expect=5e-08]; ENSG00000234876, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000204301, NOTCH4, notch 4, [Score=53.9, Expect=5e-08]; ENSG00000235396, NOTCH4, notch 4, [Score=52.4, Expect=2e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=52.0, Expect=2e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=53.5, Expect=5e-08]; ENSMUSG00000026923, Notch1, notch 1, [Score=52.0, Expect=2e-07]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710}
2.	MligTC455_44219	289	6.02	Mlig455_053855	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.323 Region-enriched R8: 2.811/0.00017 Region-enriched R7: 1.862/0.03239	CDH23	2.543	-	-	0.753	0.957	-	0.833	Mlig455_053855 {REF} {Length: 9181} {Pfam: Cadherin domain [PF00028.19, score=457.3]; Cadherin-like [PF08266.14, score=40.7]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=538, Expect=6e-156]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=536, Expect=9e-156]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [RH, Score=635, Expect=0.0]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=240, Expect=3e-63]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [RH, Score=749, Expect=0.0]} {RNA1509_10347} {RNA1310_449.1} {RNA815_181}
3.	MligTC455_21782	3524	73.42	Mlig455_009440	Neo: - Age: - Region-enriched R8: 1.988/0.00000 Region-enriched R7: 1.168/0.00043 Regeneration-downregulated BL: -1.563 Regeneration-depleted BL: -1.563		1.796	-	-	-	0.962	-	0.834	Mlig455_009440 {REF} {Length: 4558} {Celegans: WBGene00015646, mlt-10, [Score=140, Expect=4e-39]} {RNA1509_14456} {RNA1310_39726.2} {RNA815_19228.1}
4.	MligTC455_13537	247	5.14	Mlig455_014382	Neo: - Age: Down-Up-Up		1.764	-	-	-	0.789	0.975	-	Mlig455_014382 {REF} {Length: 1551} {RNA1509_34193} {RNA1310_28373.2, RNA1509_34193} {RNA1509_34193, RNA815_6877.1}
5.	MligTC455_53510	405	8.43	Mlig455_039941	Neo: - Age: Up-Down-Down Region-enriched R8: 3.005/0.01946 Region-enriched R7: 2.875/0.00224	KREMEN1	1.749	-	-	-	0.985	-	0.764	Mlig455_039941 {REF} {Length: 4661} {Pfam: WSC domain [PF01822.21, score=619.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=66.6, Expect=2e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=63.9, Expect=9e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=71.2, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.0, Expect=3e-06]} {RNA1509_15008} {RNA1310_5799, RNA1509_15008} {RNA1509_15008, RNA815_22574}
6.	MligTC455_33203	151	3.15	Mlig455_033692, Mlig455_050137	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_033692 {REF} {Length: 1036} {NoTransDecoderORF} {RNA1509_59732} {RNA1310_52952} {RNA815_34163} Mlig455_050137 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_59732, RNA1509_60018} {RNA1310_63905.1, RNA1509_59732, RNA1509_60018} {RNA1509_59732, RNA1509_60018, RNA815_34163}
7.	MligTC455_35161	35	0.73	Mlig455_012119	Neo: - Age: Down-Up-Down		0.972	-	-	-	-	-	0.972	Mlig455_012119 {REF} {Length: 3213} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.1]} {Smed: dd_Smed_v6_13661_0_1, dd_Smed_v6_13661_0_1, [Score=81.3, Expect=2e-17]} {RNA1509_53704} {RNA1310_36988} {RNA815_11369}
8.	MligTC455_00918	9	0.19	Mlig455_058006	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_058006 {REF} {Length: 671}
9.	MligTC455_14586	41	0.85	Mlig455_021826	Neo: - Age: Down-Down-Up		0.967	-	-	-	-	-	0.967	Mlig455_021826 {REF} {Length: 2345} {Pfam: NHL repeat [PF01436.23, score=29.4]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=1e-06]} {RNA1310_10763.1} {RNA815_45413}
10.	MligTC455_51381	347	7.23	Mlig455_024564	Neo: - Age: Down-Up-Down		0.965	-	-	-	0.965	-	-	Mlig455_024564 {REF} {Length: 1946} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [RH, Score=73.2, Expect=7e-15]} {RNA1509_27432} {RNA1310_25177} {RNA815_20912}
11.	MligTC455_27753	29	0.6	Mlig455_031842, Mlig455_068301	Neo: - Age: Up-Down-Down		0.961	-	-	-	-	0.961	-	Mlig455_031842 {REF} {Length: 11944} {Pfam: WSC domain [PF01822.21, score=142.9]; Sushi repeat (SCR repeat) [PF00084.22, score=86.0]; Lectin C-type domain [PF00059.23, score=63.6]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=39.0]} {RNA1310_49657} {RNA815_14687.1} Mlig455_068301 {REF} {Length: 11182} {Pfam: WSC domain [PF01822.21, score=146.3]; Sushi repeat (SCR repeat) [PF00084.22, score=84.3]; Lectin C-type domain [PF00059.23, score=46.4]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=32.4]} {RNA1310_49657} {RNA815_48518}
12.	MligTC455_49963	193	4.03	Mlig455_023960	Neo: - Age: -	AGRN	0.961	-	-	-	-	-	0.961	Mlig455_023960 {REF} {Length: 1768} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=144.2]; Kazal-type serine protease inhibitor domain [PF00050.23, score=74.2]} {Human: ENSG00000188157, AGRN, agrin, [Score=111, Expect=4e-25]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=129, Expect=2e-31]} {Dmel: FBgn0052354, CG32354, [Score=60.1, Expect=3e-09]} {Celegans: WBGene00018304, agr-1, AGRin (Synaptic protein) homolog; AGRin (Synaptic protein) homolog family member, [Score=145, Expect=7e-37]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=170, Expect=2e-45]} {RNA1509_47154} {RNA1310_39829.2} {RNA815_11942}
13.	MligTC455_37458	120	2.49	Mlig455_037280, Mlig455_042333, Mlig455_055120	Neo: - Age: -	CUBN	0.959	-	-	-	-	0.959	-	Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1} Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1} Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
14.	MligTC455_44344	105	2.18	Mlig455_034809	Neo: - Age: - Region-enriched R2: 4.521/0.01555	ECE2	0.958	-	-	-	-	0.958	-	Mlig455_034809 {REF} {Length: 2882} {Pfam: Peptidase family M13 [PF05649.15, score=83.7]; Peptidase family M13 [PF01431.23, score=48.1]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=131, Expect=7e-31]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=130, Expect=1e-30]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=127, Expect=9e-30]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=127, Expect=1e-29]} {Dmel: FBgn0029843, Nep1, Neprilysin 1, [Score=108, Expect=8e-24]} {Celegans: WBGene00017842, nep-12, NEPrilysin metallopeptidase family, [Score=106, Expect=2e-23]} {Smed: dd_Smed_v6_30500_0_1, dd_Smed_v6_30500_0_1, [RH, Score=60.1, Expect=2e-09]} {RNA1310_33925} {RNA815_33631}
15.	MligTC455_26589	24	0.5	Mlig455_058296	Neo: - Age: Down-Up-Down		0.956	-	-	-	-	0.956	-	Mlig455_058296 {REF} {Length: 3207} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=22.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.2]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=109, Expect=5e-25]} {RNA1509_42704} {RNA1310_21353.1} {RNA815_9313}
16.	MligTC455_40613	41	0.86	Mlig455_026807	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_026807 {REF} {Length: 1929} {RNA1509_37399} {RNA1310_18527, RNA1509_37399} {RNA1509_37399, RNA815_9560}
17.	MligTC455_25785	47	0.97	Mlig455_046276	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_046276 {REF} {Length: 1627} {RNA1509_22707} {RNA1310_33596.2} {RNA815_24119.2}
18.	MligTC455_25670	56	1.17	Mlig455_002942	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.002 Region-enriched R3: 3.168/0.04222		0.951	-	-	-	-	0.951	-	Mlig455_002942 {REF} {Length: 2524} {RNA1509_57755} {RNA1310_35856.1} {RNA815_19086}
19.	MligTC455_07616	35	0.72	Mlig455_065059	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_065059 {REF} {Length: 1111} {TRANSSPLICED} {RNA1509_11880} {RNA1310_57329} {RNA815_53141}
20.	MligTC455_38490	38	0.8	Mlig455_028980	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	0.950	-	Mlig455_028980 {REF} {Length: 3387} {RNA1509_29504} {RNA1310_1629} {RNA815_5687}