TomoSeq data search

Data search

Results for MligTC455_26807

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26807

563

11.74

Mlig455_002350

Neo: -

Age: Down-Up-Up

C8orf37

Mlig455_002350 {REF} {Length: 1660} {Pfam: Retinal Maintenance [PF14996.8, score=124.2]} {Human: ENSG00000156172, C8orf37, chromosome 8 open reading frame 37, [RH, Score=78.2, Expect=2e-17]} {Mouse: ENSMUSG00000059482, 2610301B20Rik, RIKEN cDNA 2610301B20 gene, [RH, Score=84.0, Expect=9e-20]} {Smed: dd_Smed_v6_8015_0_1, dd_Smed_v6_8015_0_1, [RH, Score=71.6, Expect=1e-15]} {RNA1509_18404} {RNA1310_31699.2, RNA1509_18404} {RNA1509_18404, RNA815_19469}

Cumulative graph for MligTC455_26807

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.691	3.826	0.08630	0.63680
RegionR2	0.788	3.826	0.13595	0.45785
RegionR3	0.06	3.826	0.89568	1.00000
RegionR4	0.411	3.826	0.42663	0.75469
RegionR5	0.42	3.826	0.34270	0.69058
RegionR6	0.111	3.826	0.82218	1.00000
RegionR7	0.5	3.826	0.38349	1.00000
RegionR8	0.4	3.826	0.55789	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.068	3.826	0.30912	1.00000
RegenerationR2	0.158	3.826	0.70625	0.95839
RegenerationR3	0.367	3.826	0.45271	0.83294
RegenerationR4	0.222	3.826	0.63902	0.92711
RegenerationR5	-0.06	3.826	0.89427	1.00000
RegenerationR6	-0.102	3.826	0.84476	0.99790
RegenerationBL	0.289	3.826	0.58471	0.93589
RegenerationTP	0.251	3.826	0.66033	0.99384

Genes with expression patterns similar to MligTC455_26807

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26807	563	11.74	Mlig455_002350	Neo: - Age: Down-Up-Up	C8orf37	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002350 {REF} {Length: 1660} {Pfam: Retinal Maintenance [PF14996.8, score=124.2]} {Human: ENSG00000156172, C8orf37, chromosome 8 open reading frame 37, [RH, Score=78.2, Expect=2e-17]} {Mouse: ENSMUSG00000059482, 2610301B20Rik, RIKEN cDNA 2610301B20 gene, [RH, Score=84.0, Expect=9e-20]} {Smed: dd_Smed_v6_8015_0_1, dd_Smed_v6_8015_0_1, [RH, Score=71.6, Expect=1e-15]} {RNA1509_18404} {RNA1310_31699.2, RNA1509_18404} {RNA1509_18404, RNA815_19469}
2.	MligTC455_09153	784	16.32	Mlig455_026817	Neo: - Age: -		1.788	-	0.833	-	-	-	0.955	Mlig455_026817 {REF} {Length: 1131} {TRANSSPLICED} {RNA1509_40542} {RNA1310_5275.2} {RNA815_1594}
3.	MligTC455_16540	670	13.96	Mlig455_047920	Neo: - Age: logFC(26M/2M)=-0.281		1.684	0.721	-	-	-	-	0.963	Mlig455_047920 {REF} {Length: 1171} {RNA1509_47877} {RNA1310_33926.1, RNA1509_47877} {RNA1509_47877, RNA815_27874}
4.	MligTC455_53181	2612	54.42	Mlig455_061859	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.238	XIRP2	1.66	-	-	-	0.706	-	0.954	Mlig455_061859 {REF} {Length: 3582} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.4]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.4, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=98.2, Expect=3e-20]} {Dmel: FBgn0063485, Lasp, [Score=57.4, Expect=4e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=107, Expect=2e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}
5.	MligTC455_33106	458	9.53	Mlig455_010260	Neo: - Age: -	DYRK2	0.976	-	-	-	-	-	0.976	Mlig455_010260 {REF} {Length: 4138} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=195.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.1]; ABC1 atypical kinase-like domain [PF03109.18, score=27.3]; Phosphotransferase enzyme family [PF01636.25, score=21.3]} {Human: ENSG00000127334, DYRK2, dual specificity tyrosine phosphorylation regulated kinase 2, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000028630, Dyrk2, dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2, [RH, Score=649, Expect=0.0]} {Dmel: FBgn0027101, Dyrk3, Dual-specificity tyrosine phosphorylation-regulated kinase 3, [RH, Score=569, Expect=0.0]} {Celegans: WBGene00003150, mbk-2, Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2, [RH, Score=587, Expect=0.0]} {Smed: dd_Smed_v6_10966_0_1, dd_Smed_v6_10966_0_1, [RH, Score=630, Expect=0.0]} {RNA1509_6870} {RNA1310_14641} {RNA815_4815}
6.	MligTC455_40330	1958	40.8	Mlig455_045511, Mlig455_065732	Neo: - Age: - Region-enriched R4: 1.036/0.01427	CETN2	0.971	-	-	-	-	-	0.971	Mlig455_045511 {REF} {Length: 1070} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=61.7]; EF-hand domain pair [PF13499.8, score=54.5]; EF-hand domain [PF13405.8, score=49.8]; EF-hand domain pair [PF13833.8, score=44.5]; EF-hand domain [PF14658.8, score=38.4]; EF hand [PF13202.8, score=34.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000147400, CETN2, centrin 2, [Score=110, Expect=8e-30]; ENSG00000177143, CETN1, centrin 1, [Score=106, Expect=4e-28]} {Mouse: ENSMUSG00000031347, Cetn2, centrin 2, [Score=110, Expect=4e-30]; ENSMUSG00000050996, Cetn1, centrin 1, [Score=110, Expect=8e-30]} {Dmel: FBgn0040010, CG17493, [Score=103, Expect=2e-27]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.0, Expect=2e-19]} {Smed: dd_Smed_v6_8753_0_2, dd_Smed_v6_8753_0_2, [RH, Score=188, Expect=4e-60]} {RNA1509_11509, RNA1509_38381} {RNA1310_11220, RNA1509_38381} {RNA1509_38381, RNA815_15066.1} Mlig455_065732 {REF} {Length: 1071} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=61.8]; EF-hand domain pair [PF13499.8, score=54.6]; EF-hand domain [PF13405.8, score=49.9]; EF-hand domain pair [PF13833.8, score=44.5]; EF-hand domain [PF14658.8, score=38.4]; EF hand [PF13202.8, score=34.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000147400, CETN2, centrin 2, [Score=110, Expect=8e-30]; ENSG00000177143, CETN1, centrin 1, [Score=106, Expect=4e-28]} {Mouse: ENSMUSG00000050996, Cetn1, centrin 1, [Score=110, Expect=8e-30]; ENSMUSG00000031347, Cetn2, centrin 2, [Score=110, Expect=4e-30]} {Dmel: FBgn0040010, CG17493, [Score=103, Expect=2e-27]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.0, Expect=2e-19]} {Smed: dd_Smed_v6_8753_0_2, dd_Smed_v6_8753_0_2, [RH, Score=188, Expect=4e-60]} {RNA1509_11509} {RNA1310_11220, RNA1509_11509} {RNA1509_11509, RNA815_15066.1}
7.	MligTC455_23080	199	4.15	Mlig455_011733	Neo: - Age: logFC(26M/2M)=-0.537	CUBN	0.967	-	0.967	-	-	-	-	Mlig455_011733 {REF} {Length: 1824} {Pfam: EGF-like domain [PF00008.29, score=38.3]; Human growth factor-like EGF [PF12661.9, score=21.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=52.8, Expect=8e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=51.6, Expect=2e-07]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=51.2, Expect=3e-07]} {Dmel: FBgn0259140, CG42255, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=54.3, Expect=2e-08]} {RNA1509_38266} {RNA1310_19274} {RNA815_9585.2}
8.	MligTC455_53182	2593	54.01	Mlig455_061866	Neo: - Age: Down-Down-Up	XIRP2	0.967	-	-	-	-	-	0.967	Mlig455_061866 {REF} {Length: 3831} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.3]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.0, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=95.9, Expect=1e-19]} {Dmel: FBgn0063485, Lasp, [Score=57.0, Expect=6e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=105, Expect=9e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}
9.	MligTC455_42379	521	10.85	Mlig455_027421	Neo: - Age: Down-Up-Down		0.963	-	-	-	-	-	0.963	Mlig455_027421 {REF} {Length: 1480} {Smed: dd_Smed_v6_15589_0_1, dd_Smed_v6_15589_0_1, [Score=81.3, Expect=4e-17]} {RNA1509_13870, RNA1509_44294} {RNA1310_12385.1, RNA1509_44294} {RNA1509_44294, RNA815_4422}
10.	MligTC455_23596	522	10.87	Mlig455_000430, Mlig455_000493, Mlig455_000531	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.390	FAT4	0.961	-	-	-	-	-	0.961	Mlig455_000430 {REF} {Length: 4267} {Pfam: Cadherin domain [PF00028.19, score=118.2]; Cadherin-like [PF16184.7, score=29.1]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=128, Expect=3e-29]; ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=127, Expect=6e-29]; ENSG00000120327, PCDHB14, protocadherin beta 14, [Score=123, Expect=2e-28]; ENSG00000143126, CELSR2, cadherin EGF LAG seven-pass G-type receptor 2, [Score=122, Expect=2e-27]} {Mouse: ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=139, Expect=6e-33]; ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=138, Expect=2e-32]} {Dmel: FBgn0038439, Cad89D, Cadherin 89D, [Score=160, Expect=9e-40]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=112, Expect=7e-25]} {Smed: dd_Smed_v6_7973_0_1, dd_Smed_v6_7973_0_1, [Score=126, Expect=1e-29]} {RNA1509_18837} {RNA1310_7055.1} {RNA815_6037} Mlig455_000493 {REF} {Length: 4048} {Pfam: Cadherin domain [PF00028.19, score=122.3]; Cadherin-like [PF16184.7, score=30.7]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=136, Expect=9e-32]; ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=133, Expect=7e-31]; ENSG00000120322, PCDHB8, protocadherin beta 8, [Score=131, Expect=1e-30]; ENSG00000120327, PCDHB14, protocadherin beta 14, [Score=130, Expect=1e-30]; ENSG00000107736, CDH23, cadherin related 23, [Score=130, Expect=5e-30]} {Mouse: ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=146, Expect=4e-35]} {Dmel: FBgn0284247, ds, dachsous, [Score=162, Expect=2e-40]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=120, Expect=2e-27]} {Smed: dd_Smed_v6_7973_0_2, dd_Smed_v6_7973_0_2, [Score=130, Expect=7e-31]} {RNA1509_18837} {RNA1310_7055.1} {RNA815_6037} Mlig455_000531 {REF} {Length: 2574} {RNA1509_18837} {RNA1310_7055.2} {RNA815_17974.1}
11.	MligTC455_19359	1441	30.02	Mlig455_010318	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.258		0.956	-	-	-	-	-	0.956	Mlig455_010318 {REF} {Length: 851} {RNA1509_15410, RNA1509_52437} {RNA1310_43315.2, RNA1509_15410, RNA1509_52437} {RNA1509_15410, RNA1509_52437, RNA815_22018.1}
12.	MligTC455_35488	1499	31.23	Mlig455_005572	Neo: - Age: logFC(26M/2M)=-0.333 Region-enriched R4: 1.174/0.00948 Region-enriched R2: 1.061/0.03531		0.955	-	-	-	-	-	0.955	Mlig455_005572 {REF} {Length: 3710} {TRANSSPLICED} {Pfam: Acetyl-CoA hydrolase/transferase C-terminal domain [PF13336.8, score=191.5]; Acetyl-CoA hydrolase/transferase N-terminal domain [PF02550.17, score=83.3]} {Dmel: FBgn0039737, CG7920, [RH, Score=516, Expect=0.0]} {Celegans: WBGene00016630, acer-1, ACEtyl-CoA Regulator, [RH, Score=503, Expect=1e-176]} {Smed: dd_Smed_v6_1775_0_1, dd_Smed_v6_1775_0_1, [RH, Score=607, Expect=0.0]} {RNA1509_17423, RNA1509_28495, RNA1509_29756, RNA1509_41178, RNA1509_43841, RNA1509_49680, RNA1509_7210} {RNA1310_12077.2, RNA1509_17423, RNA1509_29756, RNA1509_41178, RNA1509_43841, RNA1509_49680, RNA1509_7210} {RNA1509_17423, RNA1509_29756, RNA1509_41178, RNA1509_43841, RNA1509_49680, RNA1509_7210, RNA815_3460.1}
13.	MligTC455_19430	476	9.92	Mlig455_059737	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.749 Region-enriched R2: 1.435/0.03961	WDR49	0.954	-	-	-	-	-	0.954	Mlig455_059737 {REF} {Length: 4068} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.0]} {Human: ENSG00000174776, WDR49, WD repeat domain 49, [Score=140, Expect=3e-35]} {Mouse: ENSMUSG00000104301, Wdr49, WD repeat domain 49, [Score=130, Expect=1e-31]} {Smed: dd_Smed_v6_5437_0_2, dd_Smed_v6_5437_0_2, [Score=132, Expect=1e-32]} {RNA1509_29401, RNA1509_3708} {RNA1310_2384.2, RNA1509_29401} {RNA1509_29401, RNA815_724.1}
14.	MligTC455_43616	1798	37.45	Mlig455_024513	Neo: - Age: logFC(26M/2M)=-0.338 Region-enriched R2: 1.066/0.02738	CFAP57	0.953	-	-	-	-	-	0.953	Mlig455_024513 {REF} {Length: 5805} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=65.8]; Crescentin protein [PF19220.2, score=26.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=25.5]; Autophagy protein 16 (ATG16) [PF08614.13, score=24.0]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=20.0]} {Human: ENSG00000243710, CFAP57, cilia and flagella associated protein 57, [RH, Score=1363, Expect=0.0]} {Mouse: ENSMUSG00000028730, Cfap57, cilia and flagella associated protein 57, [RH, Score=1360, Expect=0.0]} {Dmel: FBgn0034745, CG4329, [RH, Score=496, Expect=5e-155]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_3323_0_1, dd_Smed_v6_3323_0_1, [RH, Score=1620, Expect=0.0]} {RNA1509_14259, RNA1509_18569, RNA1509_42897, RNA1509_836} {RNA1310_1737, RNA1509_14259, RNA1509_18569, RNA1509_42897} {RNA1509_14259, RNA1509_18569, RNA1509_42897, RNA815_558}
15.	MligTC455_20690	198	4.13	Mlig455_066013	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.916	TMEM145	0.952	-	-	-	-	-	0.952	Mlig455_066013 {REF} {Length: 4544} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=161.8]} {Human: ENSG00000167619, TMEM145, transmembrane protein 145, [RH, Score=241, Expect=5e-72]} {Mouse: ENSMUSG00000043843, Tmem145, transmembrane protein 145, [RH, Score=276, Expect=1e-84]} {Dmel: FBgn0034674, CG9304, [Score=67.0, Expect=2e-11]} {Celegans: WBGene00007595, C15A7.2, [Score=200, Expect=4e-57]} {RNA1509_54390, RNA1509_56975} {RNA1310_10889.1, RNA1509_54390} {RNA1509_54390, RNA815_2731}
16.	MligTC455_23082	1608	33.5	Mlig455_024173	Neo: - Age: -	FAT4	0.952	-	-	-	-	-	0.952	Mlig455_024173 {REF} {Length: 8284} {Pfam: Cadherin domain [PF00028.19, score=731.9]; Cadherin-like [PF16184.7, score=111.8]; Cadherin-like [PF08266.14, score=26.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=544, Expect=2e-155]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=514, Expect=2e-146]} {Dmel: FBgn0284247, ds, dachsous, [Score=463, Expect=8e-131]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=276, Expect=4e-74]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=279, Expect=7e-75]} {RNA1509_848} {RNA1310_296} {RNA815_105}
17.	MligTC455_27274	1384	28.83	Mlig455_053028	Neo: - Age: Down-Down-Up	RHBDL2	0.952	-	-	-	-	-	0.952	Mlig455_053028 {REF} {Length: 2917} {Pfam: Rhomboid family [PF01694.24, score=106.0]; EF-hand domain pair [PF13499.8, score=21.5]; EF hand [PF00036.34, score=19.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=161, Expect=1e-44]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=172, Expect=5e-49]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [Score=165, Expect=3e-45]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=165, Expect=4e-46]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=306, Expect=4e-99]} {RNA1509_2577, RNA1509_42551} {RNA1310_13375, RNA1509_42551} {RNA1509_42551, RNA815_2003.1}
18.	MligTC455_14494	310	6.46	Mlig455_019231	Neo: - Age: -	ANKEF1	0.95	-	-	-	-	-	0.950	Mlig455_019231 {REF} {Length: 2621} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=159.3]; Ankyrin repeats (many copies) [PF13637.8, score=133.0]; Ankyrin repeat [PF13606.8, score=111.4]; Ankyrin repeats (many copies) [PF13857.8, score=106.3]; Ankyrin repeat [PF00023.32, score=97.4]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [Score=437, Expect=9e-143]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [Score=434, Expect=1e-141]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=95.9, Expect=5e-20]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=80.9, Expect=2e-15]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [Score=577, Expect=0.0]} {RNA1509_22782} {RNA1310_8283, RNA1509_22782} {RNA1509_22782, RNA815_2494.1}
19.	MligTC455_53180	2599	54.15	Mlig455_010514	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.445	XIRP2	0.95	-	-	-	-	-	0.950	Mlig455_010514 {REF} {Length: 3954} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.3]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.0, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=95.9, Expect=1e-19]} {Dmel: FBgn0063485, Lasp, [Score=57.0, Expect=6e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=107, Expect=2e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}

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