TomoSeq data search

Data search

Results for MligTC455_26837

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26837	41	0.86	Mlig455_068076	Neo: - Age: logFC(26M/2M)=1.074	ANKEF1	Mlig455_068076 {REF} {Length: 9802} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=52.7]; Protein kinase domain [PF00069.27, score=50.2]; Ankyrin repeats (many copies) [PF13857.8, score=48.7]; Ankyrin repeats (many copies) [PF13637.8, score=47.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.2]; Ankyrin repeat [PF13606.8, score=35.2]; Kinase-like [PF14531.8, score=28.8]; Ankyrin repeat [PF00023.32, score=25.5]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [Score=66.2, Expect=1e-10]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=63.9, Expect=7e-10]; ENSG00000145362, ANK2, ankyrin 2, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [Score=68.2, Expect=2e-11]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=65.9, Expect=1e-10]} {Dmel: FBgn0029137, Patsas, [Score=65.9, Expect=5e-11]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=63.2, Expect=2e-10]} {RNA1509_16424} {RNA1310_309.1} {RNA815_5308}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26837

0.86

Mlig455_068076

Neo: -

Age: logFC(26M/2M)=1.074

ANKEF1

Mlig455_068076 {REF} {Length: 9802} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=52.7]; Protein kinase domain [PF00069.27, score=50.2]; Ankyrin repeats (many copies) [PF13857.8, score=48.7]; Ankyrin repeats (many copies) [PF13637.8, score=47.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.2]; Ankyrin repeat [PF13606.8, score=35.2]; Kinase-like [PF14531.8, score=28.8]; Ankyrin repeat [PF00023.32, score=25.5]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [Score=66.2, Expect=1e-10]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=63.9, Expect=7e-10]; ENSG00000145362, ANK2, ankyrin 2, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [Score=68.2, Expect=2e-11]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=65.9, Expect=1e-10]} {Dmel: FBgn0029137, Patsas, [Score=65.9, Expect=5e-11]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=63.2, Expect=2e-10]} {RNA1509_16424} {RNA1310_309.1} {RNA815_5308}

Cumulative graph for MligTC455_26837

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.338	1.133	0.99984	1.00000
RegionR2	0.38	1.133	0.99981	1.00000
RegionR3	0.212	1.133	0.69540	1.00000
RegionR4	-0.659	1.133	0.76149	1.00000
RegionR5	1.565	1.133	0.16457	0.42913
RegionR6	0.678	1.133	0.55110	1.00000
RegionR7	-0.496	1.133	1.00000	1.00000
RegionR8	0.658	1.133	0.79644	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.936	1.133	0.75046	1.00000
RegenerationR2	4.586	1.133	0.00055	0.03222
RegenerationR3	3.621	1.133	0.02696	0.29564
RegenerationR4	3.018	1.133	0.03780	0.31405
RegenerationR5	1.742	1.133	0.12991	0.53570
RegenerationR6	2.915	1.133	0.06805	0.32690
RegenerationBL	2.235	1.133	0.32742	0.69392
RegenerationTP	3.852	1.133	0.11851	0.52621

Genes with expression patterns similar to MligTC455_26837

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26837	41	0.86	Mlig455_068076	Neo: - Age: logFC(26M/2M)=1.074	ANKEF1	2	-	-	-	-	1.000	1.000	Mlig455_068076 {REF} {Length: 9802} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=52.7]; Protein kinase domain [PF00069.27, score=50.2]; Ankyrin repeats (many copies) [PF13857.8, score=48.7]; Ankyrin repeats (many copies) [PF13637.8, score=47.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.2]; Ankyrin repeat [PF13606.8, score=35.2]; Kinase-like [PF14531.8, score=28.8]; Ankyrin repeat [PF00023.32, score=25.5]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [Score=66.2, Expect=1e-10]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=63.9, Expect=7e-10]; ENSG00000145362, ANK2, ankyrin 2, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [Score=68.2, Expect=2e-11]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=65.9, Expect=1e-10]} {Dmel: FBgn0029137, Patsas, [Score=65.9, Expect=5e-11]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=63.2, Expect=2e-10]} {RNA1509_16424} {RNA1310_309.1} {RNA815_5308}
2.	MligTC455_37739	214	4.46	Mlig455_042190, Mlig455_059011	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_042190 {REF} {Length: 3209} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425} Mlig455_059011 {REF} {Length: 3198} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425}
3.	MligTC455_53565	193	4.01	Mlig455_062595	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R4: 2.981/0.00018		0.961	-	-	-	-	-	0.961	Mlig455_062595 {REF} {Length: 5130} {TRANSSPLICED} {RNA1509_6709} {RNA1310_37517} {RNA815_23743}
4.	MligTC455_18976	55	1.14	Mlig455_035823	Neo: - Age: - Regeneration-upregulated R2: 5.480 Regeneration-enriched R2: 5.480		0.96	-	-	-	-	-	0.960	Mlig455_035823 {REF} {Length: 968} {NoTransDecoderORF} {RNA1310_56884}
5.	MligTC455_39906	139	2.89	Mlig455_049343, Mlig455_049422	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_049343 {REF} {Length: 2156} {RNA1509_40494} {RNA1310_28921} {RNA815_64475} Mlig455_049422 {REF} {Length: 1736} {NoTransDecoderORF} {RNA1310_20532}
6.	MligTC455_43221	257	5.35	Mlig455_066152	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_066152 {REF} {Length: 787} {RNA1310_44205}
7.	MligTC455_29449	88	1.84	Mlig455_055134	Neo: - Age: Up-Down-Down Region-enriched R4: 2.118/0.04706		0.952	-	-	-	-	-	0.952	Mlig455_055134 {REF} {Length: 3438} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=42.7, Expect=8e-06]} {RNA1509_50401} {RNA1310_13609} {RNA815_5685.1}
8.	MligTC455_36768	627	13.06	Mlig455_047617, Mlig455_047668	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.354 Region-enriched R4: 2.336/0.01334	CASP3	0.952	-	-	-	-	0.952	-	Mlig455_047617 {REF} {Length: 5415} {Pfam: Caspase domain [PF00656.24, score=97.8]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=63.5, Expect=3e-10]} {Mouse: ENSMUSG00000025888, Casp1, caspase 1, [Score=67.4, Expect=2e-11]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=49.7, Expect=6e-06]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=60.8, Expect=1e-09]} {RNA1509_18240} {RNA1310_3181} {RNA815_2826} Mlig455_047668 {REF} {Length: 3971} {Pfam: Caspase domain [PF00656.24, score=97.8]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=63.5, Expect=3e-10]} {Mouse: ENSMUSG00000025888, Casp1, caspase 1, [Score=67.4, Expect=2e-11]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=49.7, Expect=6e-06]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=60.8, Expect=1e-09]} {RNA1509_18240, RNA1509_55746} {RNA1310_3181, RNA1509_55746} {RNA1509_55746, RNA815_2826}
9.	MligTC455_05326	69	1.45	Mlig455_064642	Neo: - Age: Down-Up-Up Region-enriched R2: 8.953/0.00001 Region-enriched R5: 5.782/0.00000		0.95	-	-	-	-	0.950	-	Mlig455_064642 {REF} {Length: 1359} {NoTransDecoderORF} {RNA1509_35042} {RNA1310_28854} {RNA815_34103}