Data search


search
Exact
Search

Results for MligTC455_37739

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37739 214 4.46 Mlig455_042190, Mlig455_059011

Neo: -

Age: -

Mlig455_042190 {REF} {Length: 3209} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425}

Mlig455_059011 {REF} {Length: 3198} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425}

Cumulative graph for MligTC455_37739

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.486 2.708 0.69764 1.00000
RegionR2 2.775 2.708 0.00418 0.05742
RegionR3 -0.355 2.708 0.91822 1.00000
RegionR4 -1.993 2.708 0.99859 1.00000
RegionR5 0.697 2.708 0.37237 0.72556
RegionR6 1.83 2.708 0.02659 0.29913
RegionR7 0.925 2.708 0.44059 1.00000
RegionR8 -4.365 2.708 0.20428 0.80369

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.467 2.708 0.32799 1.00000
RegenerationR2 -0.17 2.708 0.76853 0.97991
RegenerationR3 1.748 2.708 0.04617 0.37448
RegenerationR4 2.332 2.708 0.00221 0.05996
RegenerationR5 0.608 2.708 0.35872 0.77065
RegenerationR6 0.804 2.708 0.23852 0.58595
RegenerationBL 1.128 2.708 0.46875 0.83501
RegenerationTP 4.152 2.708 0.00678 0.13892


Genes with expression patterns similar to MligTC455_37739

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37739 214 4.46 Mlig455_042190, Mlig455_059011

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_042190 {REF} {Length: 3209} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425}

Mlig455_059011 {REF} {Length: 3198} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425}
2. MligTC455_23581 225 4.69 Mlig455_015808

Neo: -

Age: -

NAA60 1.773 - - - 0.813 - 0.960 Mlig455_015808 {REF} {Length: 6520} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=46.0]; Acetyltransferase (GNAT) domain [PF13508.9, score=26.8]; FR47-like protein [PF08445.12, score=24.8]; Acetyltransferase (GNAT) domain [PF13673.9, score=23.2]} {Human: ENSG00000122390, NAA60, N(alpha)-acetyltransferase 60, NatF catalytic subunit, [RH, Score=172, Expect=3e-52]} {Mouse: ENSMUSG00000005982, Naa60, N(alpha)-acetyltransferase 60, NatF catalytic subunit, [RH, Score=171, Expect=9e-52]} {Dmel: FBgn0036039, Naa60, N(alpha)-acetyltransferase 60, [RH, Score=165, Expect=1e-49]} {Celegans: WBGene00009277, F30F8.10, [RH, Score=120, Expect=1e-32]} {Smed: dd_Smed_v6_4766_0_1, dd_Smed_v6_4766_0_1, [RH, Score=150, Expect=7e-44]} {RNA1509_25064, RNA1509_33189} {RNA1310_13963, RNA1509_25064, RNA1509_33189} {RNA1509_25064, RNA1509_33189, RNA815_11012}
3. MligTC455_40284 142 2.97 Mlig455_045795

Neo: -

Age: -

1.752 - - - - 0.952 0.800 Mlig455_045795 {REF} {Length: 965} {NoTransDecoderORF} {RNA1509_26792} {RNA1310_13078}
4. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

1.746 - - - - 0.951 0.795 Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
5. MligTC455_37405 29 0.61 Mlig455_054637

Neo: -

Age: -

0.97 - - - - 0.970 - Mlig455_054637 {REF} {Length: 3450} {RNA1509_28394} {RNA1310_11109} {RNA815_4621}
6. MligTC455_44757 573 11.93 Mlig455_027141, Mlig455_030701

Neo: -

Age: -

0.965 - - - - 0.965 -

Mlig455_027141 {REF} {Length: 1533} {TRANSSPLICED} {tRNA: Val(TAC),pseudo, score=29.5} {Pfam: COMM domain [PF07258.16, score=21.7]} {RNA1509_28826} {RNA1310_33598} {RNA815_23398}

Mlig455_030701 {REF} {Length: 1622} {TRANSSPLICED} {tRNA: Val(TAC),pseudo, score=29.5} {Pfam: COMM domain [PF07258.16, score=21.7]} {RNA1509_28826} {RNA1310_33598} {RNA815_23398}
7. MligTC455_26837 41 0.86 Mlig455_068076

Neo: -

Age: logFC(26M/2M)=1.074

ANKEF1 0.962 - - - - - 0.962 Mlig455_068076 {REF} {Length: 9802} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=52.7]; Protein kinase domain [PF00069.27, score=50.2]; Ankyrin repeats (many copies) [PF13857.8, score=48.7]; Ankyrin repeats (many copies) [PF13637.8, score=47.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.2]; Ankyrin repeat [PF13606.8, score=35.2]; Kinase-like [PF14531.8, score=28.8]; Ankyrin repeat [PF00023.32, score=25.5]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [Score=66.2, Expect=1e-10]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=63.9, Expect=7e-10]; ENSG00000145362, ANK2, ankyrin 2, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [Score=68.2, Expect=2e-11]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=65.9, Expect=1e-10]} {Dmel: FBgn0029137, Patsas, [Score=65.9, Expect=5e-11]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=63.2, Expect=2e-10]} {RNA1509_16424} {RNA1310_309.1} {RNA815_5308}
8. MligTC455_40134 396 8.25 Mlig455_003061, Mlig455_003267

Neo: Int S/G2/M

Age: -

0.959 - - - - 0.959 -

Mlig455_003061 {REF} {Length: 2554} {Pfam: WD domain, G-beta repeat [PF00400.34, score=27.5]} {RNA1509_32538, RNA1509_54728} {RNA1310_22220, RNA1509_32538, RNA1509_54728} {RNA1509_32538, RNA1509_54728, RNA815_9624}

Mlig455_003267 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.3]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=48.9, Expect=4e-06]} {RNA1509_32538} {RNA1310_22220} {RNA815_9624}
9. MligTC455_42582 101 2.11 Mlig455_006503

Neo: -

Age: Up-Down-Down

MOSPD1 0.957 - - - - 0.957 - Mlig455_006503 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: MSP (Major sperm protein) domain [PF00635.28, score=49.6]} {Human: ENSG00000101928, MOSPD1, motile sperm domain containing 1, [RH, Score=93.6, Expect=1e-22]} {Mouse: ENSMUSG00000023074, Mospd1, motile sperm domain containing 1, [RH, Score=95.1, Expect=2e-23]} {RNA1509_17503} {RNA1310_37601} {RNA815_17755}
10. MligTC455_30091 42 0.88 Mlig455_041359

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.463

HK1 0.956 - - - - 0.956 - Mlig455_041359 {REF} {Length: 3047} {Pfam: Hexokinase [PF03727.18, score=236.5]; Hexokinase [PF00349.23, score=182.4]} {Human: ENSG00000156515, HK1, hexokinase 1, [Score=316, Expect=5e-98]; ENSG00000156510, HKDC1, hexokinase domain containing 1, [Score=315, Expect=2e-97]} {Mouse: ENSMUSG00000020080, Hkdc1, hexokinase domain containing 1, [Score=319, Expect=3e-99]; ENSMUSG00000037012, Hk1, hexokinase 1, [Score=314, Expect=3e-97]} {Dmel: FBgn0001186, Hex-A, Hexokinase A, [RH, Score=345, Expect=2e-113]} {Celegans: WBGene00008780, hxk-1, Phosphotransferase, [Score=330, Expect=2e-108]} {Smed: dd_Smed_v6_4327_0_1, dd_Smed_v6_4327_0_1, [Score=299, Expect=1e-96]} {RNA1509_6851} {RNA1310_17801} {RNA815_4267}
11. MligTC455_22335 168 3.51 Mlig455_002669, Mlig455_014723

Neo: -

Age: -

0.954 - - - - 0.954 -

Mlig455_002669 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_58323} {RNA1310_33624.1, RNA1509_58323} {RNA1509_58323, RNA815_17640.1}

Mlig455_014723 {REF} {Length: 261} {RNA1509_23617} {RNA1310_25392} {RNA815_17640.1}
12. MligTC455_46107 48 0.99 Mlig455_059438

Neo: -

Age: -

NEUROD1 0.954 - - - - 0.954 - Mlig455_059438 {REF} {Length: 2657} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=55.6]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=64.3, Expect=9e-11]; ENSG00000123307, NEUROD4, neuronal differentiation 4, [Score=63.2, Expect=2e-10]; ENSG00000181965, NEUROG1, neurogenin 1, [Score=63.2, Expect=7e-11]; ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=62.8, Expect=3e-11]; ENSG00000171532, NEUROD2, neuronal differentiation 2, [Score=61.6, Expect=9e-10]; ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=61.6, Expect=6e-10]} {Mouse: ENSMUSG00000068079, Tcf15, transcription factor 15, [Score=65.1, Expect=7e-12]; ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=64.3, Expect=6e-11]; ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=63.5, Expect=1e-11]; ENSMUSG00000048904, Neurog1, neurogenin 1, [Score=63.2, Expect=6e-11]; ENSMUSG00000048015, Neurod4, neurogenic differentiation 4, [Score=62.4, Expect=2e-10]; ENSMUSG00000026735, Ptf1a, pancreas specific transcription factor, 1a, [Score=62.0, Expect=3e-10]} {Dmel: FBgn0037475, Fer1, 48 related 1, [Score=72.4, Expect=4e-14]} {Celegans: WBGene00001954, hlh-10, Helix Loop Helix, [RH, Score=55.5, Expect=9e-09]} {Smed: dd_Smed_v6_6869_0_1, dd_Smed_v6_6869_0_1, [RH, Score=67.4, Expect=4e-13]} {RNA1509_59553} {RNA1310_27559} {RNA815_43865.1}
13. MligTC455_16977 41 0.86 Mlig455_006005

Neo: -

Age: -

0.953 - - - 0.953 - - Mlig455_006005 {REF} {Length: 2914} {NoTransDecoderORF} {RNA1509_46050} {RNA1310_75939} {RNA815_50611}
14. MligTC455_19148 151 3.15 Mlig455_041025

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.901

DUT 0.953 - - - - - 0.953 Mlig455_041025 {REF} {Length: 736} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=108.5]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=101, Expect=2e-27]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.4, Expect=2e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=107, Expect=9e-30]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=105, Expect=5e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=105, Expect=1e-29]} {RNA1509_31148} {RNA1310_12927} {RNA815_27386}
15. MligTC455_20927 128 2.66 Mlig455_052078

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_052078 {REF} {Length: 666} {NoTransDecoderORF} {RNA1310_56856} {RNA815_15280}
16. MligTC455_29891 49 1.02 Mlig455_006434

Neo: -

Age: Up-Down-Up

CRB2 0.952 - - - - 0.952 - Mlig455_006434 {REF} {Length: 3643} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=109.5]; Human growth factor-like EGF [PF12661.9, score=64.4]; Laminin G domain [PF02210.26, score=31.8]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=261, Expect=8e-72]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=256, Expect=6e-70]} {Dmel: FBgn0259685, crb, crumbs, [Score=235, Expect=5e-63]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=139, Expect=4e-33]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=136, Expect=3e-32]} {RNA1509_29406} {RNA1310_26279.1} {RNA815_3525.1}
17. MligTC455_31573 514 10.7 Mlig455_001346, Mlig455_017670, Mlig455_059364, Mlig455_061555, Mlig455_065573

Neo: -

Age: -

0.952 - - - - 0.952 -

Mlig455_001346 {REF} {Length: 1233} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_24468.1} {RNA815_39459}

Mlig455_017670 {REF} {Length: 949} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_24468.1} {RNA815_39459}

Mlig455_059364 {REF} {Length: 344} {NoTransDecoderORF} {RNA1310_43058} {RNA815_29433}

Mlig455_061555 {REF} {Length: 1233} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_24468.1} {RNA815_39459}

Mlig455_065573 {REF} {Length: 2722} {NoTransDecoderORF} {RNA1509_58615} {RNA1310_58277} {RNA815_2042.1}
18. MligTC455_49207 271 5.64 Mlig455_037375

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_037375 {REF} {Length: 880} {RNA1509_49653} {RNA1310_49359.1} {RNA815_26981}
19. MligTC455_49783 2785 58.03 Mlig455_043327

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.545

Region-enriched R4: 2.687/0.00159

SQSTM1 0.952 - - - - 0.952 - Mlig455_043327 {REF} {Length: 2615} {Pfam: Zinc finger, ZZ type [PF00569.19, score=39.0]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=65.5, Expect=7e-12]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=72.8, Expect=2e-13]} {Celegans: WBGene00012067, sqst-3, SeQueSTosome related, [RH, Score=57.8, Expect=3e-09]} {Smed: dd_Smed_v6_3712_0_1, dd_Smed_v6_3712_0_1, [RH, Score=57.4, Expect=3e-09]} {RNA1509_1501, RNA1509_26162, RNA1509_46437} {RNA1310_8305, RNA1509_26162, RNA1509_46437} {RNA1509_26162, RNA1509_46437, RNA815_9798.1}
20. MligTC455_32423 283 5.9 Mlig455_055060

Neo: Irradiation

Age: Up-Down-Down

0.951 - - - - 0.951 - Mlig455_055060 {REF} {Length: 2866} {RNA1509_52975} {RNA1310_17621, RNA1509_52975} {RNA1509_52975, RNA815_10158}
21. MligTC455_52769 73 1.51 Mlig455_005296

Neo: -

Age: Up-Down-Up

0.951 - - - - 0.951 - Mlig455_005296 {REF} {Length: 1157} {TRANSSPLICED} {RNA1509_54814} {RNA1310_30336.1} {RNA815_6347.1}
22. MligTC455_28215 32 0.66 Mlig455_002396

Neo: -

Age: -

Region-enriched R4: 6.954/0.00596

0.95 - - - - 0.950 - Mlig455_002396 {REF} {Length: 2150} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1}
23. MligTC455_32424 611 12.73 Mlig455_031894, Mlig455_061292, Mlig455_064662

Neo: -

Age: -

0.95 - - - - 0.950 -

Mlig455_031894 {REF} {Length: 1087} {RNA1509_52975} {RNA1310_17621}

Mlig455_061292 {REF} {Length: 179} {NoTransDecoderORF} {RNA1509_52975} {RNA1310_115556}

Mlig455_064662 {REF} {Length: 1953} {RNA1509_52975} {RNA1310_17621} {RNA815_50584}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA