Data search
Results for MligTC455_26868
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26868 | 7580 | 157.92 | Mlig455_068813 | Neo: Int S/G2/M |
RPL31 | Mlig455_068813 {REF} {Length: 494} {TRANSSPLICED} {Pfam: Ribosomal protein L31e [PF01198.21, score=152.6]} {Human: ENSG00000071082, RPL31, ribosomal protein L31, [RH, Score=180, Expect=2e-59]} {Mouse: ENSMUSG00000073702, Rpl31, ribosomal protein L31, [RH, Score=180, Expect=1e-59]} {Dmel: FBgn0285949, RpL31, Ribosomal protein L31, [RH, Score=145, Expect=3e-46]} {Celegans: WBGene00004445, rpl-31, 60S ribosomal protein L31, [RH, Score=152, Expect=4e-49]} {Smed: dd_Smed_v6_113_0_1, dd_Smed_v6_113_0_1, [RH, Score=178, Expect=2e-59]} {RNA1509_2069, RNA1509_23361} {RNA1310_71506.1, RNA1509_2069, RNA1509_23361} {RNA1509_2069, RNA1509_23361, RNA815_35805.2} |
Cumulative graph for MligTC455_26868
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.74 | 7.437 | 0.08965 | 0.64402 | |
| RegionR2 | -0.231 | 7.437 | 0.45057 | 0.83822 | |
| RegionR3 | 0.511 | 7.437 | 0.04704 | 0.37987 | |
| RegionR4 | 0.384 | 7.437 | 0.17950 | 0.44907 | |
| RegionR5 | 0.296 | 7.437 | 0.23627 | 0.54556 | |
| RegionR6 | 0.073 | 7.437 | 0.78026 | 1.00000 | |
| RegionR7 | 0.197 | 7.437 | 0.44589 | 1.00000 | |
| RegionR8 | -0.491 | 7.437 | 0.10731 | 0.61065 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.752 | 7.437 | 0.01465 | 0.51131 | |
| RegenerationR2 | -0.608 | 7.437 | 0.06191 | 0.40833 | |
| RegenerationR3 | -0.679 | 7.437 | 0.03984 | 0.35115 | |
| RegenerationR4 | -0.52 | 7.437 | 0.12192 | 0.53169 | |
| RegenerationR5 | -0.448 | 7.437 | 0.17346 | 0.60254 | |
| RegenerationR6 | -0.419 | 7.437 | 0.21240 | 0.55607 | |
| RegenerationBL | -0.487 | 7.437 | 0.11676 | 0.40445 | |
| RegenerationTP | -0.303 | 7.437 | 0.36327 | 0.80279 |
Genes with expression patterns similar to MligTC455_26868
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26868 | 7580 | 157.92 | Mlig455_068813 | Neo: Int S/G2/M |
RPL31 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_068813 {REF} {Length: 494} {TRANSSPLICED} {Pfam: Ribosomal protein L31e [PF01198.21, score=152.6]} {Human: ENSG00000071082, RPL31, ribosomal protein L31, [RH, Score=180, Expect=2e-59]} {Mouse: ENSMUSG00000073702, Rpl31, ribosomal protein L31, [RH, Score=180, Expect=1e-59]} {Dmel: FBgn0285949, RpL31, Ribosomal protein L31, [RH, Score=145, Expect=3e-46]} {Celegans: WBGene00004445, rpl-31, 60S ribosomal protein L31, [RH, Score=152, Expect=4e-49]} {Smed: dd_Smed_v6_113_0_1, dd_Smed_v6_113_0_1, [RH, Score=178, Expect=2e-59]} {RNA1509_2069, RNA1509_23361} {RNA1310_71506.1, RNA1509_2069, RNA1509_23361} {RNA1509_2069, RNA1509_23361, RNA815_35805.2} |
| 2. | MligTC455_52551 | 10588 | 220.58 | Mlig455_004126 | Neo: Int S/G2/M Age: Down-Down-Up |
RPL36 | 2.43 | 0.713 | 0.757 | - | - | - | 0.960 | Mlig455_004126 {REF} {Length: 488} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_11076, RNA1509_15742, RNA1509_864} {RNA1310_72529.3, RNA1509_15742, RNA1509_864} {RNA1509_15742, RNA1509_864, RNA815_37483} |
| 3. | MligTC455_51216 | 5475 | 114.05 | Mlig455_047550, Mlig455_069680 | Neo: - Age: Down-Down-Up |
LSAMP | 1.799 | - | - | - | 0.967 | - | 0.832 | Mlig455_047550 {REF} {Length: 2394} {Pfam: Immunoglobulin domain [PF13927.8, score=113.9]; Immunoglobulin domain [PF00047.27, score=86.0]; Immunoglobulin I-set domain [PF07679.18, score=78.9]; Immunoglobulin domain [PF13895.8, score=72.5]; Immunoglobulin V-set domain [PF07686.19, score=59.0]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=38.6]} {Human: ENSG00000185565, LSAMP, limbic system associated membrane protein, [Score=83.6, Expect=2e-17]; ENSG00000172260, NEGR1, neuronal growth regulator 1, [Score=82.4, Expect=9e-17]} {Mouse: ENSMUSG00000061080, Lsamp, limbic system-associated membrane protein, [Score=84.0, Expect=2e-17]; ENSMUSG00000040037, Negr1, neuronal growth regulator 1, [Score=83.2, Expect=3e-17]} {Dmel: FBgn0085382, CG34353, [Score=90.1, Expect=3e-19]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=60.5, Expect=1e-09]} {Smed: dd_Smed_v6_2826_0_1, dd_Smed_v6_2826_0_1, [RH, Score=225, Expect=1e-69]} {RNA1509_3076} {RNA1310_10384.1, RNA1509_3076} {RNA1509_3076, RNA815_3524.1} Mlig455_069680 {REF} {Length: 2760} {Pfam: Immunoglobulin domain [PF13927.8, score=113.9]; Immunoglobulin domain [PF00047.27, score=86.0]; Immunoglobulin I-set domain [PF07679.18, score=78.9]; Immunoglobulin domain [PF13895.8, score=72.5]; Immunoglobulin V-set domain [PF07686.19, score=59.0]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=38.6]} {Human: ENSG00000185565, LSAMP, limbic system associated membrane protein, [Score=83.6, Expect=2e-17]; ENSG00000172260, NEGR1, neuronal growth regulator 1, [Score=82.4, Expect=9e-17]} {Mouse: ENSMUSG00000061080, Lsamp, limbic system-associated membrane protein, [Score=84.0, Expect=2e-17]; ENSMUSG00000040037, Negr1, neuronal growth regulator 1, [Score=83.2, Expect=3e-17]} {Dmel: FBgn0085382, CG34353, [Score=90.1, Expect=3e-19]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=60.5, Expect=1e-09]} {Smed: dd_Smed_v6_2826_0_1, dd_Smed_v6_2826_0_1, [RH, Score=225, Expect=1e-69]} {RNA1509_3076, RNA1509_56669} {RNA1310_10384.2, RNA1509_56669} {RNA1509_56669, RNA815_3524.1} |
| 4. | MligTC455_40085 | 1042 | 21.7 | Mlig455_017812 | Neo: - Age: - |
COPA | 1.777 | - | - | - | - | 0.951 | 0.826 | Mlig455_017812 {REF} {Length: 5061} {Pfam: Coatomer (COPI) alpha subunit C-terminus [PF06957.13, score=504.4]; Coatomer WD associated region [PF04053.16, score=415.9]; WD domain, G-beta repeat [PF00400.34, score=129.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.3]} {Human: ENSG00000122218, COPA, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Mouse: ENSMUSG00000026553, Copa, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Dmel: FBgn0025725, alphaCOP, Coat Protein (coatomer) alpha, [RH, Score=1533, Expect=0.0]} {Celegans: WBGene00022119, copa-1, Coatomer subunit alpha, [RH, Score=1371, Expect=0.0]} {Smed: dd_Smed_v6_1980_0_1, dd_Smed_v6_1980_0_1, [RH, Score=1512, Expect=0.0]} {RNA1509_1280} {RNA1310_1196.1, RNA1509_1280} {RNA1509_1280, RNA815_2831.1} |
| 5. | MligTC455_50429 | 4857 | 101.19 | Mlig455_053964 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.220 |
RPL39 | 1.774 | 0.824 | - | - | - | - | 0.950 | Mlig455_053964 {REF} {Length: 321} {TRANSSPLICED} {Pfam: Ribosomal L39 protein [PF00832.22, score=70.5]} {Human: ENSG00000198918, RPL39, ribosomal protein L39, [RH, Score=80.1, Expect=5e-22]} {Mouse: ENSMUSG00000079641, Rpl39, ribosomal protein L39, [RH, Score=80.1, Expect=3e-22]; ENSMUSG00000039209, Rpl39l, ribosomal protein L39-like, [RH, Score=77.0, Expect=7e-21]} {Dmel: FBgn0023170, RpL39, Ribosomal protein L39, [RH, Score=70.1, Expect=2e-18]} {Celegans: WBGene00004453, rpl-39, 60S ribosomal protein L39, [RH, Score=71.6, Expect=4e-19]} {Smed: dd_Smed_v6_67236_0_1, dd_Smed_v6_67236_0_1, [RH, Score=72.0, Expect=3e-19]} {RNA1509_3085, RNA1509_30931} {RNA1310_100169.1, RNA1509_3085, RNA1509_30931} {RNA1509_3085, RNA1509_30931, RNA815_47849} |
| 6. | MligTC455_22083 | 2309 | 48.1 | Mlig455_005295 | Neo: - Age: - |
GABARAPL2 | 1.687 | - | 0.734 | - | - | 0.953 | - | Mlig455_005295 {REF} {Length: 1355} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=163.4]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=25.1]} {Human: ENSG00000034713, GABARAPL2, GABA type A receptor associated protein like 2, [RH, Score=173, Expect=5e-57]} {Mouse: ENSMUSG00000031950, Gabarapl2, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2, [RH, Score=173, Expect=4e-57]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=149, Expect=9e-48]} {Celegans: WBGene00002980, lgg-1, [Score=153, Expect=3e-49]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [RH, Score=176, Expect=3e-58]} {RNA1509_1579} {RNA1310_26997.1} {RNA815_11869} |
| 7. | MligTC455_35211 | 4527 | 94.31 | Mlig455_050817 | Neo: Int S/G2/M Age: Down-Up-Up |
PFDN6 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_050817 {REF} {Length: 568} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF01920.22, score=75.9]; Prefoldin subunit [PF02996.19, score=19.3]} {Human: ENSG00000224782, PFDN6, prefoldin subunit 6, [RH, Score=117, Expect=1e-34]; ENSG00000204220, PFDN6, prefoldin subunit 6, [RH, Score=117, Expect=1e-34]; ENSG00000235692, PFDN6, prefoldin subunit 6, [RH, Score=117, Expect=1e-34]; ENSG00000237335, PFDN6, prefoldin subunit 6, [RH, Score=117, Expect=1e-34]; ENSG00000206283, PFDN6, prefoldin subunit 6, [RH, Score=117, Expect=1e-34]} {Mouse: ENSMUSG00000024309, Pfdn6, prefoldin subunit 6, [RH, Score=117, Expect=6e-35]} {Dmel: FBgn0036918, Pfdn6, Prefoldin 6, [RH, Score=87.8, Expect=3e-23]} {Celegans: WBGene00009004, pfd-6, Probable prefoldin subunit 6, [RH, Score=77.8, Expect=2e-19]} {Smed: dd_Smed_v6_1030_0_1, dd_Smed_v6_1030_0_1, [RH, Score=75.9, Expect=7e-19]} {RNA1509_10332, RNA1509_40894, RNA1509_4383, RNA1509_58529} {RNA1310_62509.1, RNA1509_10332, RNA1509_40894, RNA1509_4383, RNA1509_58529} {RNA1509_10332, RNA1509_40894, RNA1509_4383, RNA1509_58529, RNA815_32198.1} |
| 8. | MligTC455_47762 | 605 | 12.6 | Mlig455_071139 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.173/0.00173 |
NT5C3A | 0.958 | - | - | - | 0.958 | - | - | Mlig455_071139 {REF} {Length: 2634} {TRANSSPLICED} {Pfam: Pyrimidine 5'-nucleotidase (UMPH-1) [PF05822.14, score=255.4]; haloacid dehalogenase-like hydrolase [PF12710.9, score=26.5]} {Human: ENSG00000122643, NT5C3A, 5'-nucleotidase, cytosolic IIIA, [RH, Score=234, Expect=5e-74]} {Mouse: ENSMUSG00000029780, Nt5c3, 5'-nucleotidase, cytosolic III, [RH, Score=232, Expect=7e-74]} {Dmel: FBgn0034988, cN-IIIB, cytosolic 5'-nucleotidase IIIB, [RH, Score=184, Expect=4e-55]} {Celegans: WBGene00017775, F25B5.3, Putative cytosolic 5'-nucleotidase 3, [RH, Score=176, Expect=2e-51]} {Smed: dd_Smed_v6_3196_0_2, dd_Smed_v6_3196_0_2, [RH, Score=230, Expect=1e-72]} {RNA1509_18774, RNA1509_39066, RNA1509_45580} {RNA1310_20363, RNA1509_18774, RNA1509_45580} {RNA1509_18774, RNA1509_45580, RNA815_5383} |
Berezikov Lab - 2020-2021 © ERIBA