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Results for MligTC455_40085

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40085 1042 21.70 Mlig455_017812

Neo: -

Age: -

 COPA Mlig455_017812 {REF} {Length: 5061} {Pfam: Coatomer (COPI) alpha subunit C-terminus [PF06957.13, score=504.4]; Coatomer WD associated region [PF04053.16, score=415.9]; WD domain, G-beta repeat [PF00400.34, score=129.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.3]} {Human: ENSG00000122218, COPA, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Mouse: ENSMUSG00000026553, Copa, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Dmel: FBgn0025725, alphaCOP, Coat Protein (coatomer) alpha, [RH, Score=1533, Expect=0.0]} {Celegans: WBGene00022119, copa-1, Coatomer subunit alpha, [RH, Score=1371, Expect=0.0]} {Smed: dd_Smed_v6_1980_0_1, dd_Smed_v6_1980_0_1, [RH, Score=1512, Expect=0.0]} {RNA1509_1280} {RNA1310_1196.1, RNA1509_1280} {RNA1509_1280, RNA815_2831.1}

Cumulative graph for MligTC455_40085

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.628 4.762 0.07595 0.60789
RegionR2 0.898 4.762 0.03733 0.22353
RegionR3 0.366 4.762 0.28564 0.82752
RegionR4 -0.807 4.762 0.05069 0.19458
RegionR5 0.183 4.762 0.55306 0.91387
RegionR6 0.038 4.762 0.91385 1.00000
RegionR7 0.759 4.762 0.04956 0.42855
RegionR8 0.191 4.762 0.70933 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.533 4.762 0.25963 0.96822
RegenerationR2 -0.012 4.762 0.97824 1.00000
RegenerationR3 0.506 4.762 0.24638 0.68034
RegenerationR4 0.591 4.762 0.17026 0.60668
RegenerationR5 -0.058 4.762 0.88747 1.00000
RegenerationR6 0.512 4.762 0.22987 0.57608
RegenerationBL 0.596 4.762 0.21034 0.55355
RegenerationTP -0.063 4.762 0.90347 1.00000


Genes with expression patterns similar to MligTC455_40085

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40085 1042 21.7 Mlig455_017812

Neo: -

Age: -

 COPA 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_017812 {REF} {Length: 5061} {Pfam: Coatomer (COPI) alpha subunit C-terminus [PF06957.13, score=504.4]; Coatomer WD associated region [PF04053.16, score=415.9]; WD domain, G-beta repeat [PF00400.34, score=129.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.3]} {Human: ENSG00000122218, COPA, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Mouse: ENSMUSG00000026553, Copa, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Dmel: FBgn0025725, alphaCOP, Coat Protein (coatomer) alpha, [RH, Score=1533, Expect=0.0]} {Celegans: WBGene00022119, copa-1, Coatomer subunit alpha, [RH, Score=1371, Expect=0.0]} {Smed: dd_Smed_v6_1980_0_1, dd_Smed_v6_1980_0_1, [RH, Score=1512, Expect=0.0]} {RNA1509_1280} {RNA1310_1196.1, RNA1509_1280} {RNA1509_1280, RNA815_2831.1}
2. MligTC455_40086 2826 58.87 Mlig455_058031

Neo: -

Age: -

 COPA 3.598 0.966 0.942 - 0.897 0.793 - Mlig455_058031 {REF} {Length: 5114} {Pfam: Coatomer (COPI) alpha subunit C-terminus [PF06957.13, score=503.4]; Coatomer WD associated region [PF04053.16, score=415.2]; WD domain, G-beta repeat [PF00400.34, score=128.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.9]} {Human: ENSG00000122218, COPA, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Mouse: ENSMUSG00000026553, Copa, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Dmel: FBgn0025725, alphaCOP, Coat Protein (coatomer) alpha, [RH, Score=1531, Expect=0.0]} {Celegans: WBGene00022119, copa-1, Coatomer subunit alpha, [RH, Score=1370, Expect=0.0]} {Smed: dd_Smed_v6_1980_0_1, dd_Smed_v6_1980_0_1, [RH, Score=1513, Expect=0.0]} {RNA1509_1280} {RNA1310_1196.1} {RNA815_2831.1}
3. MligTC455_26868 7580 157.92 Mlig455_068813

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.358

 RPL31 1.777 - - - - 0.951 0.826 Mlig455_068813 {REF} {Length: 494} {TRANSSPLICED} {Pfam: Ribosomal protein L31e [PF01198.21, score=152.6]} {Human: ENSG00000071082, RPL31, ribosomal protein L31, [RH, Score=180, Expect=2e-59]} {Mouse: ENSMUSG00000073702, Rpl31, ribosomal protein L31, [RH, Score=180, Expect=1e-59]} {Dmel: FBgn0285949, RpL31, Ribosomal protein L31, [RH, Score=145, Expect=3e-46]} {Celegans: WBGene00004445, rpl-31, 60S ribosomal protein L31, [RH, Score=152, Expect=4e-49]} {Smed: dd_Smed_v6_113_0_1, dd_Smed_v6_113_0_1, [RH, Score=178, Expect=2e-59]} {RNA1509_2069, RNA1509_23361} {RNA1310_71506.1, RNA1509_2069, RNA1509_23361} {RNA1509_2069, RNA1509_23361, RNA815_35805.2}
4. MligTC455_43704 2154 44.88 Mlig455_045986

Neo: -

Age: -

Region-enriched R4: 1.252/0.00264

 CLPX 0.961 - - - 0.961 - - Mlig455_045986 {REF} {Length: 3306} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=146.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=54.6]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=34.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=31.0]; Sigma-54 interaction domain [PF00158.28, score=27.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=22.5]; MCM P-loop domain [PF00493.25, score=21.9]; AAA ATPase domain [PF13191.8, score=19.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.6]; AAA domain [PF13401.8, score=19.4]} {Human: ENSG00000166855, CLPX, caseinolytic mitochondrial matrix peptidase chaperone subunit, [Score=446, Expect=2e-148]} {Mouse: ENSMUSG00000015357, Clpx, caseinolytic mitochondrial matrix peptidase chaperone subunit, [Score=448, Expect=2e-149]} {Dmel: FBgn0038745, CG4538, [RH, Score=446, Expect=3e-148]} {Celegans: WBGene00008412, D2030.2, [RH, Score=368, Expect=5e-119]} {Smed: dd_Smed_v6_6460_0_1, dd_Smed_v6_6460_0_1, [RH, Score=366, Expect=2e-118]} {RNA1509_5163} {RNA1310_3401} {RNA815_1346.1}

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