TomoSeq data search

Data search

Results for MligTC455_26937

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26937	64	1.33	Mlig455_010675, Mlig455_045780	Neo: - Age: - Region-enriched R2: 4.507/0.03386		Mlig455_010675 {REF} {Length: 380} {RNA1509_39861} {RNA1310_110514} {RNA815_10210.1} Mlig455_045780 {REF} {Length: 946} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=32.9]} {RNA1509_6409} {RNA1310_98757} {RNA815_10210.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_26937

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.344	1.684	0.99954	1.00000
RegionR2	4.507	1.684	0.00191	0.03386
RegionR3	2.259	1.684	0.09326	0.53756
RegionR4	0.061	1.684	0.65340	0.95497
RegionR5	1.888	1.684	0.12092	0.34839
RegionR6	2.695	1.684	0.04416	0.39300
RegionR7	-2.43	1.684	0.99967	1.00000
RegionR8	-2.636	1.684	0.99966	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.088	1.684	0.99984	1.00000
RegenerationR2	0.766	1.684	0.27020	0.71617
RegenerationR3	1.829	1.684	0.04219	0.35978
RegenerationR4	2.042	1.684	0.02576	0.25751
RegenerationR5	0.869	1.684	0.24934	0.68279
RegenerationR6	1.033	1.684	0.25436	0.60436
RegenerationBL	2.354	1.684	0.30083	0.66420
RegenerationTP	5.439	1.684	0.02395	0.26285

Genes with expression patterns similar to MligTC455_26937

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26937	64	1.33	Mlig455_010675, Mlig455_045780	Neo: - Age: - Region-enriched R2: 4.507/0.03386		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010675 {REF} {Length: 380} {RNA1509_39861} {RNA1310_110514} {RNA815_10210.1} Mlig455_045780 {REF} {Length: 946} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=32.9]} {RNA1509_6409} {RNA1310_98757} {RNA815_10210.1}
2.	MligTC455_26936	33	0.7	Mlig455_034967, Mlig455_045779	Neo: - Age: Up-Down-Up		3.841	0.981	1.000	-	-	0.898	0.962	Mlig455_034967 {REF} {Length: 1157} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=33.9]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=182, Expect=2e-50]} {RNA1509_6409} {RNA1310_984} {RNA815_3352} Mlig455_045779 {REF} {Length: 3602} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=95.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=59.4]; Integrase zinc binding domain [PF17921.3, score=51.5]; Integrase core domain [PF00665.28, score=45.1]; Aspartyl protease [PF13650.8, score=19.8]} {Mouse: ENSMUSG00000026333, Gin1, gypsy retrotransposon integrase 1, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=310, Expect=7e-90]} {RNA1509_6409} {RNA1310_782} {RNA815_3352}
3.	MligTC455_44503	114	2.37	Mlig455_022220	Neo: - Age: -		2.507	0.807	-	0.954	-	0.746	-	Mlig455_022220 {REF} {Length: 3854} {Pfam: Innexin [PF00876.20, score=328.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.1]} {Dmel: FBgn0024177, zpg, zero population growth, [Score=90.1, Expect=2e-19]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=261, Expect=2e-82]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=280, Expect=2e-89]} {RNA1509_58318} {RNA1310_12574.1} {RNA815_26857}
4.	MligTC455_06838	42	0.88	Mlig455_063567	Neo: - Age: Down-Down-Up		1.728	-	-	0.981	-	0.747	-	Mlig455_063567 {REF} {Length: 1509} {RNA1310_26608}
5.	MligTC455_37557	184	3.84	Mlig455_004005	Neo: - Age: -	SLC16A12	1.726	-	-	-	0.758	0.968	-	Mlig455_004005 {REF} {Length: 2674} {Pfam: Major Facilitator Superfamily [PF07690.18, score=122.4]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=52.2]; Vacuole effluxer Atg22 like [PF11700.10, score=25.3]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [RH, Score=192, Expect=1e-54]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=194, Expect=7e-56]} {Dmel: FBgn0023549, Mct1, Monocarboxylate transporter 1, [Score=169, Expect=5e-46]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=156, Expect=2e-41]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=181, Expect=1e-50]} {RNA1509_33139} {RNA1310_17032} {RNA815_6570}
6.	MligTC455_12124	22	0.46	Mlig455_008041	Neo: - Age: -	POMGNT1	1.692	-	-	0.951	-	0.741	-	Mlig455_008041 {REF} {Length: 1990} {Pfam: GNT-I family [PF03071.17, score=56.0]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=192, Expect=1e-52]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=192, Expect=5e-53]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=67.4, Expect=1e-11]} {Celegans: WBGene00019786, M70.4, [RH, Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_12622_0_1, dd_Smed_v6_12622_0_1, [Score=48.1, Expect=1e-05]} {RNA1509_56901} {RNA1310_37241.1} {RNA815_25346}
7.	MligTC455_24579	103	2.14	Mlig455_003042, Mlig455_003334	Neo: - Age: Up-Down-Down	KCTD1	1.658	-	-	0.952	-	0.706	-	Mlig455_003042 {REF} {Length: 2750} {RNA1509_34279} {RNA1310_18990} {RNA815_11695} Mlig455_003334 {REF} {Length: 4230} {Pfam: Phage integrase family [PF00589.24, score=19.9]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=65.9, Expect=2e-10]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=65.1, Expect=2e-10]} {RNA1310_18990} {RNA815_11695}
8.	MligTC455_42012	50	1.04	Mlig455_066508	Neo: - Age: -	SEC23IP	0.985	-	-	0.985	-	-	-	Mlig455_066508 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=165.8]; SAM domain (Sterile alpha motif) [PF00536.32, score=28.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=23.5]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSG00000085788, DDHD2, DDHD domain containing 2, [RH, Score=485, Expect=4e-161]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSMUSG00000061313, Ddhd2, DDHD domain containing 2, [RH, Score=478, Expect=1e-158]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [RH, Score=254, Expect=2e-74]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=95.9, Expect=4e-20]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [RH, Score=288, Expect=3e-83]} {RNA1509_38825} {RNA1310_9070.1} {RNA815_7099}
9.	MligTC455_17416	105	2.19	Mlig455_069824	Neo: - Age: logFC(26M/2M)=-0.738 Region-enriched R8: 4.558/0.04613		0.979	-	-	0.979	-	-	-	Mlig455_069824 {REF} {Length: 4488} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=19.2]} {RNA1509_29097} {RNA1310_38285} {RNA815_28497}
10.	MligTC455_48594	940	19.57	Mlig455_017682	Neo: - Age: - Region-enriched R2: 2.296/0.00015 Region-enriched R7: 1.307/0.04045 Regeneration-downregulated BL: -7.035 Regeneration-depleted BL: -7.035	LIMA1	0.972	-	-	-	-	0.972	-	Mlig455_017682 {REF} {Length: 2023} {Pfam: LIM domain [PF00412.24, score=52.8]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=73.9, Expect=1e-16]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [Score=72.0, Expect=3e-16]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [Score=69.7, Expect=4e-16]} {Dmel: FBgn0259209, Mlp60A, Muscle LIM protein at 60A, [Score=60.1, Expect=1e-13]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=68.6, Expect=9e-17]} {Smed: dd_Smed_v6_537_0_1, dd_Smed_v6_537_0_1, [RH, Score=110, Expect=6e-34]} {RNA1509_13529, RNA1509_3532} {RNA1310_18801.1, RNA1509_13529, RNA1509_3532} {RNA1509_13529, RNA1509_3532, RNA815_9444.1}
11.	MligTC455_06002	108	2.24	Mlig455_067469	Neo: - Age: -	CHRNA10	0.971	-	-	-	-	0.971	-	Mlig455_067469 {REF} {Length: 3906} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=181.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=66.5]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=198, Expect=2e-57]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=193, Expect=9e-56]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=192, Expect=7e-55]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=199, Expect=6e-58]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=196, Expect=1e-56]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=192, Expect=1e-54]} {Celegans: WBGene00000043, acr-3, Acetylcholine receptor subunit beta-type acr-3, [Score=195, Expect=2e-56]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=226, Expect=3e-67]} {RNA1509_21945} {RNA1310_29351} {RNA815_3782.1}
12.	MligTC455_47364	56	1.16	Mlig455_060227	Neo: - Age: -		0.97	-	-	0.970	-	-	-	Mlig455_060227 {REF} {Length: 2643} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20343.2} {RNA815_28545}
13.	MligTC455_38577	53	1.1	Mlig455_039955, Mlig455_039969	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_039955 {REF} {Length: 1584} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576} Mlig455_039969 {REF} {Length: 462} {NoTransDecoderORF} {RNA1310_21615.2}
14.	MligTC455_31193	110	2.29	Mlig455_055801	Neo: - Age: -		0.966	-	-	0.966	-	-	-	Mlig455_055801 {REF} {Length: 1730} {RNA1509_53053} {RNA1310_76106} {RNA815_54420}
15.	MligTC455_16183	94	1.97	Mlig455_030155	Neo: - Age: Up-Up-Down	FPGS	0.965	-	-	-	-	0.965	-	Mlig455_030155 {REF} {Length: 2353} {TRANSSPLICED} {Human: ENSG00000136877, FPGS, folylpolyglutamate synthase, [Score=235, Expect=3e-70]} {Mouse: ENSMUSG00000009566, Fpgs, folylpolyglutamyl synthetase, [Score=230, Expect=2e-68]} {Dmel: FBgn0030407, CG2543, [Score=191, Expect=2e-54]} {Celegans: WBGene00017777, F25B5.6, Putative folylpolyglutamate synthase, [Score=201, Expect=8e-59]} {Smed: dd_Smed_v6_6956_0_1, dd_Smed_v6_6956_0_1, [Score=192, Expect=2e-55]} {RNA1509_18289} {RNA1310_13820} {RNA815_6991}
16.	MligTC455_10198	5	0.11	Mlig455_014342	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_014342 {REF} {Length: 1289}
17.	MligTC455_11821	11	0.24	Mlig455_033657	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_033657 {REF} {Length: 387} {NoTransDecoderORF} {RNA1310_72338}
18.	MligTC455_13586	14	0.29	Mlig455_000201	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_000201 {REF} {Length: 495} {NoTransDecoderORF} {RNA1509_42285} {RNA1310_50010} {RNA815_32667}
19.	MligTC455_39087	5	0.1	Mlig455_048530	Neo: - Age: -	CHRNA2	0.957	-	-	0.957	-	-	-	Mlig455_048530 {REF} {Length: 1855} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=150.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=113.6]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=214, Expect=5e-62]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=209, Expect=2e-60]} {Mouse: ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=205, Expect=8e-59]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=203, Expect=2e-58]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=199, Expect=7e-56]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=190, Expect=5e-53]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=179, Expect=9e-50]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [Score=417, Expect=1e-139]} {RNA1509_37874} {RNA1310_15730, RNA1509_37874} {RNA1509_37874, RNA815_6322}
20.	MligTC455_44239	43	0.9	Mlig455_002480	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_002480 {REF} {Length: 1329} {NoTransDecoderORF} {RNA1509_49118} {RNA1310_34083} {RNA815_11074.2}
21.	MligTC455_48928	26	0.55	Mlig455_055757	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_055757 {REF} {Length: 666} {NoTransDecoderORF} {RNA1310_102252} {RNA815_45044}
22.	MligTC455_43783	8	0.17	Mlig455_018589	Neo: - Age: -		0.951	-	-	0.951	-	-	-	Mlig455_018589 {REF} {Length: 1005} {Pfam: WSC domain [PF01822.21, score=54.3]}
23.	MligTC455_19424	49	1.02	Mlig455_022599	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_022599 {REF} {Length: 1327} {NoTransDecoderORF} {RNA1509_17743} {RNA1310_67838} {RNA815_53186}
24.	MligTC455_21343	55	1.15	Mlig455_000941	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_000941 {REF} {Length: 1784} {RNA1509_3287} {RNA1310_6659.2} {RNA815_2405}
25.	MligTC455_52079	9	0.19	Mlig455_035423	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_035423 {REF} {Length: 1072} {NoTransDecoderORF} {RNA1509_8399} {RNA1310_99860} {RNA815_41272}
26.	MligTC455_54107	15	0.32	Mlig455_016592	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_016592 {REF} {Length: 389} {NoTransDecoderORF} {RNA1509_56712} {RNA1310_28731.1} {RNA815_11279}