TomoSeq data search

Data search

Results for MligTC455_47364

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47364	56	1.16	Mlig455_060227	Neo: - Age: -		Mlig455_060227 {REF} {Length: 2643} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20343.2} {RNA815_28545}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_47364

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2	1.482	1.00000	1.00000
RegionR2	1.713	1.482	0.28488	0.67223
RegionR3	0.755	1.482	0.48182	0.98343
RegionR4	3.823	1.482	0.02175	0.10830
RegionR5	2.416	1.482	0.05024	0.18812
RegionR6	1.227	1.482	0.37224	0.95283
RegionR7	-3.786	1.482	1.00000	1.00000
RegionR8	-4.147	1.482	0.99975	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.214	1.482	1.00000	1.00000
RegenerationR2	0.434	1.482	0.67455	0.94690
RegenerationR3	1.145	1.482	0.41565	0.81251
RegenerationR4	0.029	1.482	0.91833	1.00000
RegenerationR5	0.772	1.482	0.50838	0.86303
RegenerationR6	0.723	1.482	0.62999	0.88673
RegenerationBL	3.665	1.482	0.09610	0.36360
RegenerationTP	4.39	1.482	0.10604	0.50426

Genes with expression patterns similar to MligTC455_47364

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47364	56	1.16	Mlig455_060227	Neo: - Age: -		5	1.000	1.000	1.000	1.000	-	1.000	Mlig455_060227 {REF} {Length: 2643} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20343.2} {RNA815_28545}
2.	MligTC455_42012	50	1.04	Mlig455_066508	Neo: - Age: -	SEC23IP	0.995	-	-	0.995	-	-	-	Mlig455_066508 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=165.8]; SAM domain (Sterile alpha motif) [PF00536.32, score=28.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=23.5]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSG00000085788, DDHD2, DDHD domain containing 2, [RH, Score=485, Expect=4e-161]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSMUSG00000061313, Ddhd2, DDHD domain containing 2, [RH, Score=478, Expect=1e-158]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [RH, Score=254, Expect=2e-74]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=95.9, Expect=4e-20]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [RH, Score=288, Expect=3e-83]} {RNA1509_38825} {RNA1310_9070.1} {RNA815_7099}
3.	MligTC455_12124	22	0.46	Mlig455_008041	Neo: - Age: -	POMGNT1	0.991	-	-	0.991	-	-	-	Mlig455_008041 {REF} {Length: 1990} {Pfam: GNT-I family [PF03071.17, score=56.0]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=192, Expect=1e-52]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=192, Expect=5e-53]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=67.4, Expect=1e-11]} {Celegans: WBGene00019786, M70.4, [RH, Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_12622_0_1, dd_Smed_v6_12622_0_1, [Score=48.1, Expect=1e-05]} {RNA1509_56901} {RNA1310_37241.1} {RNA815_25346}
4.	MligTC455_47528	80	1.67	Mlig455_033824	Neo: - Age: Down-Up-Down	TSG101	0.985	-	-	0.985	-	-	-	Mlig455_033824 {REF} {Length: 5043} {Pfam: UEV domain [PF05743.15, score=133.4]; Vps23 core domain [PF09454.12, score=65.6]} {Human: ENSG00000074319, TSG101, tumor susceptibility 101, [RH, Score=282, Expect=8e-92]} {Mouse: ENSMUSG00000014402, Tsg101, tumor susceptibility gene 101, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0036666, TSG101, Tumor susceptibility gene 101, [RH, Score=261, Expect=6e-84]} {Celegans: WBGene00015658, tsg-101, Tumor Susceptibility Gene homolog, [RH, Score=129, Expect=1e-33]} {Smed: dd_Smed_v6_1686_0_1, dd_Smed_v6_1686_0_1, [Score=266, Expect=2e-86]} {RNA1509_5025} {RNA1310_48912.1} {RNA815_21967}
5.	MligTC455_06838	42	0.88	Mlig455_063567	Neo: - Age: Down-Down-Up		0.971	-	-	0.971	-	-	-	Mlig455_063567 {REF} {Length: 1509} {RNA1310_26608}
6.	MligTC455_26937	64	1.33	Mlig455_010675, Mlig455_045780	Neo: - Age: - Region-enriched R2: 4.507/0.03386		0.97	-	-	0.970	-	-	-	Mlig455_010675 {REF} {Length: 380} {RNA1509_39861} {RNA1310_110514} {RNA815_10210.1} Mlig455_045780 {REF} {Length: 946} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=32.9]} {RNA1509_6409} {RNA1310_98757} {RNA815_10210.1}
7.	MligTC455_15449	384	7.99	Mlig455_043360	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_043360 {REF} {Length: 1602} {NoTransDecoderORF} {RNA1509_38319} {RNA1310_35989.1} {RNA815_36673}
8.	MligTC455_20231	57	1.19	Mlig455_053859	Neo: - Age: Down-Up-Up Regeneration-downregulated R4: -5.496 Regeneration-depleted R4: -5.496		0.967	-	-	0.967	-	-	-	Mlig455_053859 {REF} {Length: 4284} {RNA1509_19779} {RNA1310_3385} {RNA815_965}
9.	MligTC455_24197	48	1	Mlig455_062645	Neo: - Age: -	KCNH7	0.963	-	-	0.963	-	-	-	Mlig455_062645 {REF} {Length: 4615} {Pfam: Ion transport protein [PF00520.33, score=125.5]; Cyclic nucleotide-binding domain [PF00027.31, score=51.0]; Ion channel [PF07885.18, score=45.8]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [RH, Score=841, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [RH, Score=818, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [RH, Score=805, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [RH, Score=840, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [RH, Score=816, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [RH, Score=805, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [RH, Score=780, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [RH, Score=764, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [RH, Score=841, Expect=0.0]} {RNA1509_16542} {RNA1310_43827} {RNA815_26448}
10.	MligTC455_37609	27	0.55	Mlig455_026308, Mlig455_026350	Neo: - Age: -	KCNH8	0.962	-	-	0.962	-	-	-	Mlig455_026308 {REF} {Length: 3639} {Pfam: Ion transport protein [PF00520.33, score=101.8]; PAS domain [PF13426.9, score=61.2]; Ion channel [PF07885.18, score=45.1]; Cyclic nucleotide-binding domain [PF00027.31, score=32.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=26.1]; PAS fold [PF08447.14, score=20.6]; PAS fold [PF00989.27, score=19.7]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [Score=536, Expect=1e-172]; ENSG00000135519, KCNH3, potassium voltage-gated channel subfamily H member 3, [Score=521, Expect=8e-167]; ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=512, Expect=2e-164]} {Mouse: ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=514, Expect=2e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=4e-130]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=764, Expect=0.0]} {RNA1509_55158} {RNA1310_3235} {RNA815_4951.1} Mlig455_026350 {REF} {Length: 4084} {Pfam: Ion transport protein [PF00520.33, score=101.4]; PAS domain [PF13426.9, score=61.9]; Ion channel [PF07885.18, score=45.2]; Cyclic nucleotide-binding domain [PF00027.31, score=34.5]; PAS fold [PF08447.14, score=22.0]; PAS fold [PF00989.27, score=21.5]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [RH, Score=542, Expect=1e-174]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=540, Expect=4e-174]; ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=513, Expect=7e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=8e-131]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=767, Expect=0.0]} {RNA1509_55158} {RNA1310_3235, RNA1509_55158} {RNA1509_55158, RNA815_4951.1}
11.	MligTC455_04631	69	1.44	Mlig455_066423	Neo: - Age: Up-Up-Down		0.96	-	-	0.960	-	-	-	Mlig455_066423 {REF} {Length: 4635} {RNA1509_18686} {RNA1310_496} {RNA815_153.1}
12.	MligTC455_48387	156	3.25	Mlig455_034372, Mlig455_043879	Neo: - Age: -	RAB24	0.96	-	-	0.960	-	-	-	Mlig455_034372 {REF} {Length: 968} {RNA1310_23950} {RNA815_28430} Mlig455_043879 {REF} {Length: 3209} {Pfam: Ras family [PF00071.24, score=97.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.9]; ADP-ribosylation factor family [PF00025.23, score=24.3]} {Human: ENSG00000169228, RAB24, RAB24, member RAS oncogene family, [Score=99.8, Expect=4e-25]} {Mouse: ENSMUSG00000034789, Rab24, RAB24, member RAS oncogene family, [Score=100, Expect=2e-25]} {Dmel: FBgn0015797, Rab6, [Score=91.3, Expect=4e-22]} {Celegans: WBGene00004270, rab-6.2, Ras-related protein Rab-6.2, [Score=90.9, Expect=3e-22]} {Smed: dd_Smed_v6_2486_0_1, dd_Smed_v6_2486_0_1, [Score=92.0, Expect=1e-22]} {RNA1310_23950} {RNA815_28430}
13.	MligTC455_19424	49	1.02	Mlig455_022599	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_022599 {REF} {Length: 1327} {NoTransDecoderORF} {RNA1509_17743} {RNA1310_67838} {RNA815_53186}
14.	MligTC455_21343	55	1.15	Mlig455_000941	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_000941 {REF} {Length: 1784} {RNA1509_3287} {RNA1310_6659.2} {RNA815_2405}
15.	MligTC455_52079	9	0.19	Mlig455_035423	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_035423 {REF} {Length: 1072} {NoTransDecoderORF} {RNA1509_8399} {RNA1310_99860} {RNA815_41272}
16.	MligTC455_54107	15	0.32	Mlig455_016592	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_016592 {REF} {Length: 389} {NoTransDecoderORF} {RNA1509_56712} {RNA1310_28731.1} {RNA815_11279}
17.	MligTC455_32615	24	0.5	Mlig455_062450	Neo: - Age: -	ARX	0.954	-	-	0.954	-	-	-	Mlig455_062450 {REF} {Length: 1977} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=119, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=117, Expect=2e-32]} {RNA1310_53718} {RNA815_48205}
18.	MligTC455_47866	19	0.4	Mlig455_060884	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_060884 {REF} {Length: 1651} {RNA1310_116717}
19.	MligTC455_19083	43	0.9	Mlig455_058600	Neo: - Age: Up-Up-Down		0.952	-	-	0.952	-	-	-	Mlig455_058600 {REF} {Length: 1797} {NoTransDecoderORF} {RNA1509_49394} {RNA1310_30812, RNA1509_49394} {RNA1509_49394, RNA815_50223}
20.	MligTC455_17416	105	2.19	Mlig455_069824	Neo: - Age: logFC(26M/2M)=-0.738 Region-enriched R8: 4.558/0.04613		0.951	-	-	0.951	-	-	-	Mlig455_069824 {REF} {Length: 4488} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=19.2]} {RNA1509_29097} {RNA1310_38285} {RNA815_28497}
21.	MligTC455_29607	447	9.31	Mlig455_006136, Mlig455_032861	Neo: - Age: -	ZDHHC17	0.95	-	-	-	-	-	0.950	Mlig455_006136 {REF} {Length: 3032} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=96.2]; Ankyrin repeat [PF00023.32, score=80.0]; Ankyrin repeat [PF13606.8, score=77.7]; Ankyrin repeats (many copies) [PF13637.8, score=75.4]; Ankyrin repeats (many copies) [PF13857.8, score=68.7]; DHHC palmitoyltransferase [PF01529.22, score=67.5]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [Score=101, Expect=7e-22]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [Score=101, Expect=7e-22]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=93.6, Expect=3e-19]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=77.4, Expect=2e-14]} {Smed: dd_Smed_v6_11895_0_1, dd_Smed_v6_11895_0_1, [RH, Score=229, Expect=7e-67]} {RNA1509_12164, RNA1509_50335} {RNA1310_11172, RNA1509_12164, RNA1509_50335} {RNA1509_12164, RNA1509_50335, RNA815_3508} Mlig455_032861 {REF} {Length: 3031} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=117.9]; Ankyrin repeat [PF00023.32, score=79.5]; Ankyrin repeat [PF13606.8, score=78.2]; Ankyrin repeats (many copies) [PF13637.8, score=75.7]; Ankyrin repeats (many copies) [PF13857.8, score=68.7]; DHHC palmitoyltransferase [PF01529.22, score=67.5]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [Score=99.8, Expect=3e-21]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [Score=99.4, Expect=3e-21]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=91.7, Expect=1e-18]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=78.2, Expect=1e-14]} {Smed: dd_Smed_v6_11895_0_1, dd_Smed_v6_11895_0_1, [RH, Score=229, Expect=8e-67]} {RNA1509_12164} {RNA1310_11172} {RNA815_3508}