Data search


search
Exact
Search

Results for MligTC455_26978

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26978 26 0.54 Mlig455_023923

Neo: -

Age: Down-Up-Up

FAHD1 Mlig455_023923 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=180.8]} {Human: ENSG00000180185, FAHD1, fumarylacetoacetate hydrolase domain containing 1, [RH, Score=201, Expect=1e-64]} {Mouse: ENSMUSG00000045316, Fahd1, fumarylacetoacetate hydrolase domain containing 1, [RH, Score=203, Expect=1e-65]} {Dmel: FBgn0038858, CG5793, [RH, Score=148, Expect=2e-44]} {Celegans: WBGene00022798, fahd-1, Fumarylacetoacetate hydrolase domain-containing protein 1, [RH, Score=178, Expect=1e-56]} {Smed: dd_Smed_v6_10557_0_2, dd_Smed_v6_10557_0_2, [RH, Score=154, Expect=6e-48]} {RNA1509_48774} {RNA1310_44571} {RNA815_22656}

Cumulative graph for MligTC455_26978

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.211 1.194 1.00000 1.00000
RegionR2 0.71 1.194 0.62926 0.97046
RegionR3 2.016 1.194 0.13416 0.62730
RegionR4 1.177 1.194 0.44166 0.77027
RegionR5 1.544 1.194 0.24349 0.55635
RegionR6 0.406 1.194 0.62100 1.00000
RegionR7 -2.26 1.194 0.99979 1.00000
RegionR8 -2.382 1.194 0.99978 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.694 1.194 0.99979 1.00000
RegenerationR2 3.144 1.194 0.01579 0.20668
RegenerationR3 0.838 1.194 0.44738 0.83064
RegenerationR4 2.25 1.194 0.16154 0.59445
RegenerationR5 1.656 1.194 0.09453 0.47084
RegenerationR6 3.782 1.194 0.00548 0.08958
RegenerationBL 2.005 1.194 1.00000 1.00000
RegenerationTP 3.278 1.194 0.30703 0.75205


Genes with expression patterns similar to MligTC455_26978

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26978 26 0.54 Mlig455_023923

Neo: -

Age: Down-Up-Up

FAHD1 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_023923 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=180.8]} {Human: ENSG00000180185, FAHD1, fumarylacetoacetate hydrolase domain containing 1, [RH, Score=201, Expect=1e-64]} {Mouse: ENSMUSG00000045316, Fahd1, fumarylacetoacetate hydrolase domain containing 1, [RH, Score=203, Expect=1e-65]} {Dmel: FBgn0038858, CG5793, [RH, Score=148, Expect=2e-44]} {Celegans: WBGene00022798, fahd-1, Fumarylacetoacetate hydrolase domain-containing protein 1, [RH, Score=178, Expect=1e-56]} {Smed: dd_Smed_v6_10557_0_2, dd_Smed_v6_10557_0_2, [RH, Score=154, Expect=6e-48]} {RNA1509_48774} {RNA1310_44571} {RNA815_22656}
2. MligTC455_12348 13 0.27 Mlig455_070964

Neo: -

Age: -

1.675 - - - - 0.968 0.707 Mlig455_070964 {REF} {Length: 760} {RNA1310_49858.1}
3. MligTC455_06052 69 1.44 Mlig455_012535

Neo: -

Age: -

0.98 - - - 0.980 - - Mlig455_012535 {REF} {Length: 999} {TRANSSPLICED} {RNA1509_59056} {RNA1310_27535, RNA1509_59056} {RNA1509_59056, RNA815_27103}
4. MligTC455_09070 40 0.83 Mlig455_054261

Neo: -

Age: logFC(26M/2M)=-1.099

ABCG2 0.979 - - - - 0.979 - Mlig455_054261 {REF} {Length: 2386} {Pfam: ABC transporter [PF00005.29, score=94.1]; ABC-2 type transporter [PF01061.26, score=66.5]; ABC-2 type transporter [PF19055.2, score=53.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=29.4]; AAA domain [PF13401.8, score=19.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=18.6]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=202, Expect=5e-56]; ENSG00000143921, ABCG8, ATP binding cassette subfamily G member 8, [Score=200, Expect=5e-55]} {Mouse: ENSMUSG00000024254, Abcg8, ATP binding cassette subfamily G member 8, [Score=200, Expect=3e-55]; ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=200, Expect=3e-55]} {Dmel: FBgn0003996, w, white, [Score=226, Expect=9e-65]} {Celegans: WBGene00008950, wht-5, WHiTe (Drosophila) related ABC transporter, [RH, Score=231, Expect=2e-66]} {Smed: dd_Smed_v6_8560_0_1, dd_Smed_v6_8560_0_1, [Score=193, Expect=5e-53]} {RNA1509_27156} {RNA1310_7789, RNA1509_27156} {RNA1509_27156, RNA815_12366}
5. MligTC455_52665 33 0.68 Mlig455_040206

Neo: -

Age: Down-Up-Down

0.977 - - - - 0.977 - Mlig455_040206 {REF} {Length: 2666} {Pfam: Family of unknown function (DUF5731) [PF19002.2, score=141.4]} {RNA1509_54737} {RNA1310_23581.1, RNA1509_54737} {RNA1509_54737, RNA815_50984}
6. MligTC455_11725 16 0.33 Mlig455_054991

Neo: -

Age: -

0.976 - - - - - 0.976 Mlig455_054991 {REF} {Length: 1000} {RNA1310_32965}
7. MligTC455_08864 295 6.14 Mlig455_035002

Neo: -

Age: -

ALS2 0.955 - - - - 0.955 - Mlig455_035002 {REF} {Length: 7545} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=85.1]; MORN repeat [PF02493.22, score=79.5]; Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=45.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=38.0]} {Human: ENSG00000003393, ALS2, ALS2, alsin Rho guanine nucleotide exchange factor, [RH, Score=305, Expect=2e-83]} {Mouse: ENSMUSG00000026024, Als2, alsin Rho guanine nucleotide exchange factor, [RH, Score=313, Expect=4e-86]} {Dmel: FBgn0037116, Als2, Amyotrophic lateral sclerosis 2, [RH, Score=88.2, Expect=6e-17]} {Smed: dd_Smed_v6_12762_0_1, dd_Smed_v6_12762_0_1, [Score=74.7, Expect=4e-13]} {RNA1509_6929} {RNA1310_334.1} {RNA815_1754}
8. MligTC455_25284 6 0.12 Mlig455_051936

Neo: -

Age: -

0.95 - - - 0.950 - - Mlig455_051936 {REF} {Length: 1050} {NoTransDecoderORF} {RNA1509_38967} {RNA1310_83430} {RNA815_39530}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA