TomoSeq data search

Data search

Results for MligTC455_08864

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08864

295

6.14

Mlig455_035002

Neo: -

Age: -

ALS2

Mlig455_035002 {REF} {Length: 7545} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=85.1]; MORN repeat [PF02493.22, score=79.5]; Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=45.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=38.0]} {Human: ENSG00000003393, ALS2, ALS2, alsin Rho guanine nucleotide exchange factor, [RH, Score=305, Expect=2e-83]} {Mouse: ENSMUSG00000026024, Als2, alsin Rho guanine nucleotide exchange factor, [RH, Score=313, Expect=4e-86]} {Dmel: FBgn0037116, Als2, Amyotrophic lateral sclerosis 2, [RH, Score=88.2, Expect=6e-17]} {Smed: dd_Smed_v6_12762_0_1, dd_Smed_v6_12762_0_1, [Score=74.7, Expect=4e-13]} {RNA1509_6929} {RNA1310_334.1} {RNA815_1754}

Cumulative graph for MligTC455_08864

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.234	2.883	0.30193	0.95178
RegionR2	1.546	2.883	0.01426	0.12524
RegionR3	0.155	2.883	0.73215	1.00000
RegionR4	-1.555	2.883	0.00692	0.04654
RegionR5	0.432	2.883	0.28464	0.61440
RegionR6	-0.004	2.883	0.99711	1.00000
RegionR7	0.074	2.883	0.90773	1.00000
RegionR8	0.587	2.883	0.43561	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.134	2.883	0.48071	1.00000
RegenerationR2	-0.282	2.883	0.62249	0.92413
RegenerationR3	-0.357	2.883	0.58094	0.89927
RegenerationR4	0.251	2.883	0.69840	0.95279
RegenerationR5	-0.746	2.883	0.18446	0.61468
RegenerationR6	0.523	2.883	0.43565	0.76123
RegenerationBL	-1.548	2.883	0.21211	0.55617
RegenerationTP	0.198	2.883	0.80722	1.00000

Genes with expression patterns similar to MligTC455_08864

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08864	295	6.14	Mlig455_035002	Neo: - Age: -	ALS2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035002 {REF} {Length: 7545} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=85.1]; MORN repeat [PF02493.22, score=79.5]; Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=45.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=38.0]} {Human: ENSG00000003393, ALS2, ALS2, alsin Rho guanine nucleotide exchange factor, [RH, Score=305, Expect=2e-83]} {Mouse: ENSMUSG00000026024, Als2, alsin Rho guanine nucleotide exchange factor, [RH, Score=313, Expect=4e-86]} {Dmel: FBgn0037116, Als2, Amyotrophic lateral sclerosis 2, [RH, Score=88.2, Expect=6e-17]} {Smed: dd_Smed_v6_12762_0_1, dd_Smed_v6_12762_0_1, [Score=74.7, Expect=4e-13]} {RNA1509_6929} {RNA1310_334.1} {RNA815_1754}
2.	MligTC455_08863	142	2.96	Mlig455_013970	Neo: Irradiation Age: -		3.765	0.917	-	-	0.932	0.974	0.942	Mlig455_013970 {REF} {Length: 1055} {NoTransDecoderORF} {RNA1509_28501} {RNA1310_334.1} {RNA815_30547}
3.	MligTC455_36164	663	13.8	Mlig455_022542, Mlig455_063673	Neo: - Age: Down-Up-Down	AC129492.3	0.975	-	-	-	-	-	0.975	Mlig455_022542 {REF} {Length: 1477} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=42.2]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=40.8, Expect=1e-05]} {RNA1509_35284} {RNA1310_53993} {RNA815_28259.1} Mlig455_063673 {REF} {Length: 2989} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=102.7]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=4e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=67.0, Expect=6e-15]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.4, Expect=9e-15]; ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.6, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=76.3, Expect=5e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=66.2, Expect=3e-15]} {RNA1509_35284} {RNA1310_53993, RNA1509_35284} {RNA1509_35284, RNA815_28259.1}
4.	MligTC455_22327	111	2.3	Mlig455_010785	Neo: - Age: -	TOP3B	0.96	-	-	0.960	-	-	-	Mlig455_010785 {REF} {Length: 3821} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=372.6]; Toprim domain [PF01751.24, score=58.1]} {Human: ENSG00000100038, TOP3B, DNA topoisomerase III beta, [RH, Score=1014, Expect=0.0]} {Mouse: ENSMUSG00000022779, Top3b, topoisomerase (DNA) III beta, [RH, Score=1003, Expect=0.0]} {Dmel: FBgn0026015, Top3beta, Topoisomerase 3beta, [RH, Score=934, Expect=0.0]} {Celegans: WBGene00012995, Y48C3A.14, DNA topoisomerase, [RH, Score=861, Expect=0.0]} {Smed: dd_Smed_v6_3597_0_1, dd_Smed_v6_3597_0_1, [RH, Score=980, Expect=0.0]} {RNA1509_6716} {RNA1310_4594, RNA1509_6716} {RNA1509_6716, RNA815_1726.1}
5.	MligTC455_52565	271	5.65	Mlig455_026362	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.320		0.959	-	-	0.959	-	-	-	Mlig455_026362 {REF} {Length: 1068} {NoTransDecoderORF} {RNA1509_33925} {RNA1310_12230.1} {RNA815_46685}
6.	MligTC455_26978	26	0.54	Mlig455_023923	Neo: - Age: Down-Up-Up	FAHD1	0.955	-	-	-	-	0.955	-	Mlig455_023923 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=180.8]} {Human: ENSG00000180185, FAHD1, fumarylacetoacetate hydrolase domain containing 1, [RH, Score=201, Expect=1e-64]} {Mouse: ENSMUSG00000045316, Fahd1, fumarylacetoacetate hydrolase domain containing 1, [RH, Score=203, Expect=1e-65]} {Dmel: FBgn0038858, CG5793, [RH, Score=148, Expect=2e-44]} {Celegans: WBGene00022798, fahd-1, Fumarylacetoacetate hydrolase domain-containing protein 1, [RH, Score=178, Expect=1e-56]} {Smed: dd_Smed_v6_10557_0_2, dd_Smed_v6_10557_0_2, [RH, Score=154, Expect=6e-48]} {RNA1509_48774} {RNA1310_44571} {RNA815_22656}
7.	MligTC455_16961	104	2.16	Mlig455_067541	Neo: - Age: Down-Up-Down Region-enriched R8: 7.114/0.00000		0.954	-	-	0.954	-	-	-	Mlig455_067541 {REF} {Length: 3643} {RNA1310_42516} {RNA815_31391}

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