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Results for MligTC455_26992

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26992 111 2.31 Mlig455_026538, Mlig455_037802, Mlig455_048806, Mlig455_057489, Mlig455_066160, Mlig455_069385

Neo: -

Age: logFC(26M/2M)=-0.552

Regeneration-upregulated R6: 6.050

Regeneration-enriched R6: 6.050

CDK2, THAP12, ZMYM1

Mlig455_026538 {REF} {Length: 5926} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=46.1]; SecA DEAD-like domain [PF07517.16, score=38.2]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=92.4, Expect=3e-18]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=89.0, Expect=3e-17]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=95.1, Expect=3e-20]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_037802 {REF} {Length: 1036} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=49.7]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=65.5, Expect=6e-12]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=65.5, Expect=4e-12]} {Smed: dd_Smed_v6_67014_0_1, dd_Smed_v6_67014_0_1, [Score=73.9, Expect=2e-17]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_048806 {REF} {Length: 2060} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=47.5]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=93.6, Expect=2e-19]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=90.9, Expect=1e-18]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=95.9, Expect=4e-21]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_057489 {REF} {Length: 2909} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=72.3]; hAT family C-terminal dimerisation region [PF05699.16, score=44.3]} {Human: ENSG00000197056, ZMYM1, zinc finger MYM-type containing 1, [Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=87.4, Expect=3e-18]} {RNA1509_17407} {RNA1310_926} {RNA815_4403}

Mlig455_066160 {REF} {Length: 2933} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=204.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.6]; hAT family C-terminal dimerisation region [PF05699.16, score=46.7]; Kinase-like [PF14531.8, score=26.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.2]} {Human: ENSG00000123374, CDK2, cyclin dependent kinase 2, [Score=233, Expect=1e-69]; ENSG00000250506, CDK3, cyclin dependent kinase 3, [Score=232, Expect=4e-69]} {Mouse: ENSMUSG00000025358, Cdk2, cyclin-dependent kinase 2, [Score=232, Expect=2e-69]; ENSMUSG00000092300, Cdk3-ps, cyclin-dependent kinase 3, pseudogene, [Score=232, Expect=2e-69]} {Dmel: FBgn0004107, Cdk2, Cyclin-dependent kinase 2, [Score=203, Expect=9e-59]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=205, Expect=2e-59]} {Smed: dd_Smed_v6_27497_0_1, dd_Smed_v6_27497_0_1, [Score=248, Expect=2e-75]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_069385 {REF} {Length: 1909} {Smed: dd_Smed_v6_27814_0_1, dd_Smed_v6_27814_0_1, [Score=93.6, Expect=4e-22]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Cumulative graph for MligTC455_26992

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.457 2.21 1.00000 1.00000
RegionR2 4.2 2.21 0.00719 0.08160
RegionR3 1.658 2.21 0.20219 0.74234
RegionR4 0.142 2.21 0.65705 0.95761
RegionR5 0.327 2.21 0.58758 0.94592
RegionR6 -0.289 2.21 0.77006 1.00000
RegionR7 -1.319 2.21 1.00000 1.00000
RegionR8 -1.261 2.21 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.544 2.21 0.99983 1.00000
RegenerationR2 3.054 2.21 0.00248 0.07514
RegenerationR3 3.764 2.21 0.00242 0.08532
RegenerationR4 3.185 2.21 0.01302 0.17647
RegenerationR5 3.388 2.21 0.00220 0.08166
RegenerationR6 6.05 2.21 0.00001 0.00166 Specific for R6: 6.050
RegenerationBL 5.208 2.21 0.00885 0.09336
RegenerationTP 5.987 2.21 0.00886 0.15866


Genes with expression patterns similar to MligTC455_26992

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26992 111 2.31 Mlig455_026538, Mlig455_037802, Mlig455_048806, Mlig455_057489, Mlig455_066160, Mlig455_069385

Neo: -

Age: logFC(26M/2M)=-0.552

Regeneration-upregulated R6: 6.050

Regeneration-enriched R6: 6.050

CDK2, THAP12, ZMYM1 5 1.000 1.000 - 1.000 1.000 1.000

Mlig455_026538 {REF} {Length: 5926} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=46.1]; SecA DEAD-like domain [PF07517.16, score=38.2]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=92.4, Expect=3e-18]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=89.0, Expect=3e-17]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=95.1, Expect=3e-20]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_037802 {REF} {Length: 1036} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=49.7]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=65.5, Expect=6e-12]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=65.5, Expect=4e-12]} {Smed: dd_Smed_v6_67014_0_1, dd_Smed_v6_67014_0_1, [Score=73.9, Expect=2e-17]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_048806 {REF} {Length: 2060} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=47.5]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=93.6, Expect=2e-19]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=90.9, Expect=1e-18]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=95.9, Expect=4e-21]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_057489 {REF} {Length: 2909} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=72.3]; hAT family C-terminal dimerisation region [PF05699.16, score=44.3]} {Human: ENSG00000197056, ZMYM1, zinc finger MYM-type containing 1, [Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=87.4, Expect=3e-18]} {RNA1509_17407} {RNA1310_926} {RNA815_4403}

Mlig455_066160 {REF} {Length: 2933} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=204.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.6]; hAT family C-terminal dimerisation region [PF05699.16, score=46.7]; Kinase-like [PF14531.8, score=26.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.2]} {Human: ENSG00000123374, CDK2, cyclin dependent kinase 2, [Score=233, Expect=1e-69]; ENSG00000250506, CDK3, cyclin dependent kinase 3, [Score=232, Expect=4e-69]} {Mouse: ENSMUSG00000025358, Cdk2, cyclin-dependent kinase 2, [Score=232, Expect=2e-69]; ENSMUSG00000092300, Cdk3-ps, cyclin-dependent kinase 3, pseudogene, [Score=232, Expect=2e-69]} {Dmel: FBgn0004107, Cdk2, Cyclin-dependent kinase 2, [Score=203, Expect=9e-59]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=205, Expect=2e-59]} {Smed: dd_Smed_v6_27497_0_1, dd_Smed_v6_27497_0_1, [Score=248, Expect=2e-75]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_069385 {REF} {Length: 1909} {Smed: dd_Smed_v6_27814_0_1, dd_Smed_v6_27814_0_1, [Score=93.6, Expect=4e-22]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}
2. MligTC455_46691 41 0.85 Mlig455_018781, Mlig455_018951

Neo: -

Age: Up-Down-Down

0.97 - 0.970 - - - -

Mlig455_018781 {REF} {Length: 1694} {Celegans: WBGene00021142, clec-133, C-type LECtin, [RH, Score=52.0, Expect=6e-08]} {RNA1310_43489} {RNA815_41340}

Mlig455_018951 {REF} {Length: 2466} {Celegans: WBGene00021142, clec-133, C-type LECtin, [RH, Score=52.0, Expect=6e-08]} {RNA1310_38733.1} {RNA815_41340}
3. MligTC455_38100 142 2.96 Mlig455_051897, Mlig455_053147

Neo: -

Age: -

PRR9 0.957 - - - 0.957 - -

Mlig455_051897 {REF} {Length: 2846} {RNA1310_27388} {RNA815_9537}

Mlig455_053147 {REF} {Length: 4758} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=49.7, Expect=6e-08]} {RNA1509_18097} {RNA1310_27388} {RNA815_9537}
4. MligTC455_25486 190 3.96 Mlig455_026974, Mlig455_030723

Neo: -

Age: -

GABBR1 0.956 - 0.956 - - - -

Mlig455_026974 {REF} {Length: 4525} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=189.2]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=169.2]; Periplasmic binding protein [PF13458.8, score=49.2]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [RH, Score=667, Expect=0.0]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [RH, Score=630, Expect=0.0]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973}

Mlig455_030723 {REF} {Length: 1229} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=73.2]; Periplasmic binding protein [PF13458.8, score=19.1]} {Human: ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=181, Expect=3e-51]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=181, Expect=1e-51]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [Score=173, Expect=4e-49]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=172, Expect=2e-50]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=194, Expect=1e-56]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973}
5. MligTC455_28911 375 7.82 Mlig455_065714

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.597

Region-enriched R2: 2.396/0.00344

0.955 - 0.955 - - - - Mlig455_065714 {REF} {Length: 10556} {TRANSSPLICED} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=35.4]; Aspartyl protease [PF13650.8, score=29.7]; Retroviral aspartyl protease [PF00077.22, score=27.6]; Zinc knuckle [PF00098.25, score=20.4]} {Smed: dd_Smed_v6_16336_0_1, dd_Smed_v6_16336_0_1, [Score=63.2, Expect=5e-10]} {RNA1509_6522} {RNA1310_59.1} {RNA815_29.1}
6. MligTC455_23969 70 1.46 Mlig455_013710

Neo: -

Age: -

TRPA1 0.953 - 0.953 - - - - Mlig455_013710 {REF} {Length: 3941} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=70.6]; Ankyrin repeats (3 copies) [PF12796.9, score=67.5]; Ankyrin repeats (many copies) [PF13857.8, score=56.5]; Ankyrin repeat [PF13606.8, score=47.5]; Ankyrin repeat [PF00023.32, score=43.8]; Ion transport protein [PF00520.33, score=38.7]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=159, Expect=2e-40]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=145, Expect=9e-36]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=184, Expect=4e-49]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=158, Expect=2e-40]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=266, Expect=9e-78]} {RNA1509_46488} {RNA1310_4045.1} {RNA815_14390}
7. MligTC455_28903 55 1.14 Mlig455_030222, Mlig455_067999

Neo: -

Age: Up-Down-Down

FAT4 0.951 - 0.951 - - - -

Mlig455_030222 {REF} {Length: 8676} {Pfam: Cadherin domain [PF00028.19, score=744.0]; Cadherin-like [PF16184.7, score=94.9]; Cadherin-like [PF08266.14, score=40.7]; RET Cadherin like domain 1 [PF17756.3, score=23.4]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=518, Expect=1e-147]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=531, Expect=9e-152]} {Dmel: FBgn0001075, ft, fat, [Score=479, Expect=9e-136]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=268, Expect=1e-71]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=260, Expect=4e-69]} {RNA1509_58830} {RNA1310_15141, RNA1509_58830} {RNA1509_58830, RNA815_18357}

Mlig455_067999 {REF} {Length: 8147} {Pfam: Cadherin domain [PF00028.19, score=745.9]; Cadherin-like [PF16184.7, score=94.8]; Cadherin-like [PF08266.14, score=40.9]; RET Cadherin like domain 1 [PF17756.3, score=23.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=519, Expect=6e-148]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=531, Expect=7e-152]} {Dmel: FBgn0001075, ft, fat, [Score=476, Expect=8e-135]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=268, Expect=1e-71]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=261, Expect=2e-69]} {RNA1509_58830} {RNA1310_15141} {RNA815_18357}
8. MligTC455_32575 62 1.29 Mlig455_024198

Neo: -

Age: logFC(26M/2M)=-0.353

FAT4 0.951 - 0.951 - - - - Mlig455_024198 {REF} {Length: 7971} {Pfam: Cadherin domain [PF00028.19, score=704.5]; Cadherin-like [PF16184.7, score=77.6]; Cadherin-like [PF08266.14, score=39.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=501, Expect=3e-142]; ENSG00000107736, CDH23, cadherin related 23, [Score=498, Expect=1e-141]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=514, Expect=1e-146]; ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=504, Expect=1e-143]} {Dmel: FBgn0284247, ds, dachsous, [Score=457, Expect=3e-129]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=277, Expect=2e-74]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=276, Expect=8e-74]} {RNA1509_24504} {RNA1310_3168, RNA1509_24504} {RNA1509_24504, RNA815_13217}

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