M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_25486

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25486 190 3.96 Mlig455_026974, Mlig455_030723

Neo: -

Age: -

 GABBR1

Mlig455_026974 {REF} {Length: 4525} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=189.2]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=169.2]; Periplasmic binding protein [PF13458.8, score=49.2]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [RH, Score=667, Expect=0.0]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [RH, Score=630, Expect=0.0]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973}

Mlig455_030723 {REF} {Length: 1229} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=73.2]; Periplasmic binding protein [PF13458.8, score=19.1]} {Human: ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=181, Expect=3e-51]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=181, Expect=1e-51]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [Score=173, Expect=4e-49]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=172, Expect=2e-50]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=194, Expect=1e-56]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973}

Cumulative graph for MligTC455_25486

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.668 2.581 0.35356 0.99679
RegionR2 2.246 2.581 0.03252 0.20521
RegionR3 0.263 2.581 0.75626 1.00000
RegionR4 0.449 2.581 0.67819 0.97323
RegionR5 0.627 2.581 0.52546 0.88790
RegionR6 0.077 2.581 0.83696 1.00000
RegionR7 -0.109 2.581 0.89692 1.00000
RegionR8 1.115 2.581 0.45314 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.585 2.581 0.99994 1.00000
RegenerationR2 1.286 2.581 0.05361 0.38152
RegenerationR3 2.002 2.581 0.02252 0.27210
RegenerationR4 1.638 2.581 0.06676 0.41215
RegenerationR5 1.788 2.581 0.01796 0.23296
RegenerationR6 2.989 2.581 0.00050 0.02342
RegenerationBL 1.186 2.581 0.28255 0.64365
RegenerationTP 2.281 2.581 0.02674 0.27521


Genes with expression patterns similar to MligTC455_25486

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25486 190 3.96 Mlig455_026974, Mlig455_030723

Neo: -

Age: -

 GABBR1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_026974 {REF} {Length: 4525} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=189.2]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=169.2]; Periplasmic binding protein [PF13458.8, score=49.2]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [RH, Score=667, Expect=0.0]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [RH, Score=630, Expect=0.0]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973}

Mlig455_030723 {REF} {Length: 1229} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=73.2]; Periplasmic binding protein [PF13458.8, score=19.1]} {Human: ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=181, Expect=3e-51]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=181, Expect=1e-51]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [Score=173, Expect=4e-49]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=172, Expect=2e-50]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=194, Expect=1e-56]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973}
2. MligTC455_19465 216 4.5 Mlig455_011567

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.898

Region-enriched R2: 2.709/0.02014

 LRRC69 1.825 - - 0.959 - 0.866 - Mlig455_011567 {REF} {Length: 2449} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=92.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=80.1]; Leucine Rich repeat [PF13516.8, score=33.3]; Leucine Rich Repeat [PF00560.35, score=27.4]} {Human: ENSG00000214954, LRRC69, leucine rich repeat containing 69, [RH, Score=198, Expect=7e-60]} {Mouse: ENSMUSG00000023151, Lrrc69, leucine rich repeat containing 69, [RH, Score=218, Expect=1e-67]} {Dmel: FBgn0033984, Lap1, [Score=105, Expect=3e-24]} {Celegans: WBGene00002632, let-413, [Score=112, Expect=8e-27]} {Smed: dd_Smed_v6_14722_0_1, dd_Smed_v6_14722_0_1, [RH, Score=184, Expect=5e-56]} {RNA1509_41102} {RNA1310_3215.1} {RNA815_13052}
3. MligTC455_50660 81 1.7 Mlig455_019591

Neo: -

Age: -

 SLC9B2 1.767 - 0.958 - - 0.809 - Mlig455_019591 {REF} {Length: 2686} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=30.0]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [Score=124, Expect=1e-31]} {Mouse: ENSMUSG00000037994, Slc9b2, solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2, [Score=116, Expect=1e-28]; ENSMUSG00000050150, Slc9b1, solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1, [Score=112, Expect=2e-27]} {Dmel: FBgn0263390, Nha2, Na[+]/H[+] hydrogen antiporter 2, [Score=113, Expect=1e-27]} {Celegans: WBGene00009618, F41E7.2, [Score=70.9, Expect=2e-13]} {Smed: dd_Smed_v6_7736_0_1, dd_Smed_v6_7736_0_1, [Score=148, Expect=1e-43]} {RNA1509_34461} {RNA1310_39553.1} {RNA815_32589}
4. MligTC455_08556 40 0.84 Mlig455_020308

Neo: -

Age: -

 1.717 - - - - 0.950 0.767 Mlig455_020308 {REF} {Length: 1035} {NoTransDecoderORF} {RNA1310_87996}
5. MligTC455_22890 365 7.6 Mlig455_021793

Neo: -

Age: -

 ARHGAP40 1.689 - - 0.716 - - 0.973 Mlig455_021793 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=112.2]} {Human: ENSG00000124143, ARHGAP40, Rho GTPase activating protein 40, [RH, Score=174, Expect=6e-46]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=167, Expect=9e-44]} {Dmel: FBgn0039994, conu, conundrum, [Score=91.7, Expect=5e-19]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [Score=79.7, Expect=4e-15]} {Smed: dd_Smed_v6_4507_0_1, dd_Smed_v6_4507_0_1, [Score=75.9, Expect=4e-14]} {RNA1509_9436} {RNA1310_4918, RNA1509_9436} {RNA1509_9436, RNA815_2562.1}
6. MligTC455_28911 375 7.82 Mlig455_065714

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.597

Region-enriched R2: 2.396/0.00344

 0.967 - 0.967 - - - - Mlig455_065714 {REF} {Length: 10556} {TRANSSPLICED} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=35.4]; Aspartyl protease [PF13650.8, score=29.7]; Retroviral aspartyl protease [PF00077.22, score=27.6]; Zinc knuckle [PF00098.25, score=20.4]} {Smed: dd_Smed_v6_16336_0_1, dd_Smed_v6_16336_0_1, [Score=63.2, Expect=5e-10]} {RNA1509_6522} {RNA1310_59.1} {RNA815_29.1}
7. MligTC455_51066 526 10.97 Mlig455_044665, Mlig455_044724

Neo: -

Age: Down-Up-Down

Region-enriched R8: 5.381/0.00000

 0.965 - - 0.965 - - -

Mlig455_044665 {REF} {Length: 1268} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}

Mlig455_044724 {REF} {Length: 1327} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}
8. MligTC455_26992 111 2.31 Mlig455_026538, Mlig455_037802, Mlig455_048806, Mlig455_057489, Mlig455_066160, Mlig455_069385

Neo: -

Age: logFC(26M/2M)=-0.552

Regeneration-upregulated R6: 6.050

Regeneration-enriched R6: 6.050

 CDK2, THAP12, ZMYM1 0.956 - 0.956 - - - -

Mlig455_026538 {REF} {Length: 5926} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=46.1]; SecA DEAD-like domain [PF07517.16, score=38.2]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=92.4, Expect=3e-18]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=89.0, Expect=3e-17]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=95.1, Expect=3e-20]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_037802 {REF} {Length: 1036} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=49.7]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=65.5, Expect=6e-12]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=65.5, Expect=4e-12]} {Smed: dd_Smed_v6_67014_0_1, dd_Smed_v6_67014_0_1, [Score=73.9, Expect=2e-17]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_048806 {REF} {Length: 2060} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=47.5]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=93.6, Expect=2e-19]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=90.9, Expect=1e-18]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=95.9, Expect=4e-21]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_057489 {REF} {Length: 2909} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=72.3]; hAT family C-terminal dimerisation region [PF05699.16, score=44.3]} {Human: ENSG00000197056, ZMYM1, zinc finger MYM-type containing 1, [Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=87.4, Expect=3e-18]} {RNA1509_17407} {RNA1310_926} {RNA815_4403}

Mlig455_066160 {REF} {Length: 2933} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=204.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.6]; hAT family C-terminal dimerisation region [PF05699.16, score=46.7]; Kinase-like [PF14531.8, score=26.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.2]} {Human: ENSG00000123374, CDK2, cyclin dependent kinase 2, [Score=233, Expect=1e-69]; ENSG00000250506, CDK3, cyclin dependent kinase 3, [Score=232, Expect=4e-69]} {Mouse: ENSMUSG00000025358, Cdk2, cyclin-dependent kinase 2, [Score=232, Expect=2e-69]; ENSMUSG00000092300, Cdk3-ps, cyclin-dependent kinase 3, pseudogene, [Score=232, Expect=2e-69]} {Dmel: FBgn0004107, Cdk2, Cyclin-dependent kinase 2, [Score=203, Expect=9e-59]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=205, Expect=2e-59]} {Smed: dd_Smed_v6_27497_0_1, dd_Smed_v6_27497_0_1, [Score=248, Expect=2e-75]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}

Mlig455_069385 {REF} {Length: 1909} {Smed: dd_Smed_v6_27814_0_1, dd_Smed_v6_27814_0_1, [Score=93.6, Expect=4e-22]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}
9. MligTC455_28910 494 10.3 Mlig455_052646

Neo: -

Age: Up-Down-Down

Region-enriched R2: 2.241/0.00809

 0.956 - 0.956 - - - - Mlig455_052646 {REF} {Length: 11406} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=22.7]} {RNA1509_13611, RNA1509_30319, RNA1509_31775, RNA1509_35318, RNA1509_529, RNA1509_6522} {RNA1310_59.1, RNA1509_13611, RNA1509_30319, RNA1509_31775, RNA1509_35318, RNA1509_529, RNA1509_6522} {RNA1509_13611, RNA1509_30319, RNA1509_31775, RNA1509_35318, RNA1509_529, RNA1509_6522, RNA815_29.1}
10. MligTC455_02931 215 4.47 Mlig455_007216, Mlig455_007226, Mlig455_007449

Neo: -

Age: -

 DACH1 0.955 - 0.955 - - - -

Mlig455_007216 {REF} {Length: 1825} {Pfam: SKI/SNO/DAC family [PF02437.19, score=116.5]} {Human: ENSG00000276644, DACH1, dachshund family transcription factor 1, [RH, Score=213, Expect=6e-60]} {Mouse: ENSMUSG00000055639, Dach1, dachshund family transcription factor 1, [RH, Score=213, Expect=5e-60]} {Dmel: FBgn0005677, dac, dachshund, [RH, Score=193, Expect=5e-52]} {Celegans: WBGene00000895, dac-1, DAChsund transcription factor homolog, [RH, Score=164, Expect=1e-44]} {Smed: dd_Smed_v6_14598_0_1, dd_Smed_v6_14598_0_1, [RH, Score=237, Expect=9e-71]} {RNA1310_26896.1} {RNA815_36501}

Mlig455_007226 {REF} {Length: 2460} {Pfam: SKI/SNO/DAC family [PF02437.19, score=117.2]} {Human: ENSG00000276644, DACH1, dachshund family transcription factor 1, [RH, Score=213, Expect=9e-62]} {Mouse: ENSMUSG00000055639, Dach1, dachshund family transcription factor 1, [RH, Score=212, Expect=7e-62]} {Dmel: FBgn0005677, dac, dachshund, [RH, Score=191, Expect=2e-53]} {Celegans: WBGene00000895, dac-1, DAChsund transcription factor homolog, [RH, Score=163, Expect=7e-46]} {Smed: dd_Smed_v6_14598_0_1, dd_Smed_v6_14598_0_1, [RH, Score=236, Expect=1e-72]} {RNA1310_26896.1} {RNA815_23939}

Mlig455_007449 {REF} {Length: 2275} {Pfam: SKI/SNO/DAC family [PF02437.19, score=116.6]} {Human: ENSG00000276644, DACH1, dachshund family transcription factor 1, [RH, Score=213, Expect=1e-59]} {Mouse: ENSMUSG00000055639, Dach1, dachshund family transcription factor 1, [RH, Score=212, Expect=6e-60]} {Dmel: FBgn0005677, dac, dachshund, [RH, Score=192, Expect=8e-52]} {Celegans: WBGene00000895, dac-1, DAChsund transcription factor homolog, [RH, Score=163, Expect=1e-44]} {Smed: dd_Smed_v6_14598_0_1, dd_Smed_v6_14598_0_1, [RH, Score=236, Expect=2e-70]} {RNA1310_26896.1} {RNA815_23939}
11. MligTC455_32575 62 1.29 Mlig455_024198

Neo: -

Age: logFC(26M/2M)=-0.353

 FAT4 0.952 - 0.952 - - - - Mlig455_024198 {REF} {Length: 7971} {Pfam: Cadherin domain [PF00028.19, score=704.5]; Cadherin-like [PF16184.7, score=77.6]; Cadherin-like [PF08266.14, score=39.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=501, Expect=3e-142]; ENSG00000107736, CDH23, cadherin related 23, [Score=498, Expect=1e-141]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=514, Expect=1e-146]; ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=504, Expect=1e-143]} {Dmel: FBgn0284247, ds, dachsous, [Score=457, Expect=3e-129]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=277, Expect=2e-74]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=276, Expect=8e-74]} {RNA1509_24504} {RNA1310_3168, RNA1509_24504} {RNA1509_24504, RNA815_13217}
12. MligTC455_23969 70 1.46 Mlig455_013710

Neo: -

Age: -

 TRPA1 0.951 - 0.951 - - - - Mlig455_013710 {REF} {Length: 3941} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=70.6]; Ankyrin repeats (3 copies) [PF12796.9, score=67.5]; Ankyrin repeats (many copies) [PF13857.8, score=56.5]; Ankyrin repeat [PF13606.8, score=47.5]; Ankyrin repeat [PF00023.32, score=43.8]; Ion transport protein [PF00520.33, score=38.7]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=159, Expect=2e-40]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=145, Expect=9e-36]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=184, Expect=4e-49]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=158, Expect=2e-40]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=266, Expect=9e-78]} {RNA1509_46488} {RNA1310_4045.1} {RNA815_14390}
13. MligTC455_26091 161 3.36 Mlig455_047190

Neo: -

Age: -

Region-enriched R2: 4.521/0.00020

 0.951 - 0.951 - - - - Mlig455_047190 {REF} {Length: 2450} {Pfam: Lectin C-type domain [PF00059.23, score=23.6]} {RNA1509_2912} {RNA1310_27113} {RNA815_24719}
14. MligTC455_47397 223 4.65 Mlig455_045414

Neo: -

Age: Down-Down-Up

 B3GNT4 0.951 - - - - - 0.951 Mlig455_045414 {REF} {Length: 2211} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=126.2]} {Human: ENSG00000176383, B3GNT4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [RH, Score=112, Expect=7e-27]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=107, Expect=4e-25]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=104, Expect=1e-24]} {Dmel: FBgn0035558, CG11357, [Score=128, Expect=2e-32]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=73.6, Expect=3e-14]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [RH, Score=259, Expect=3e-83]} {RNA1509_45947, RNA1509_48792} {RNA1310_17060, RNA1509_45947, RNA1509_48792} {RNA1509_45947, RNA1509_48792, RNA815_18250}
15. MligTC455_48041 684 14.26 Mlig455_015166

Neo: -

Age: Down-Up-Down

 SQSTM1 0.95 - - - - - 0.950 Mlig455_015166 {REF} {Length: 2821} {Pfam: UBA domain [PF16577.7, score=30.1]; Zinc finger, ZZ type [PF00569.19, score=27.1]; PB1 domain [PF00564.26, score=25.6]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=108, Expect=2e-25]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [RH, Score=59.7, Expect=3e-09]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=52.8, Expect=3e-07]} {RNA1509_49422, RNA1509_56663} {RNA1310_11564, RNA1509_56663} {RNA1509_56663, RNA815_6596}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA