Data search


search
Exact
Search

Results for MligTC455_27022

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27022 27 0.57 Mlig455_020641

Neo: -

Age: -

Regeneration-enriched R3: 8.698
Regeneration-enriched R5: 8.436
Regeneration-enriched R4: 8.173

Mlig455_020641 {REF} {Length: 249} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}

Cumulative graph for MligTC455_27022

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.356 1.017 0.99968 1.00000
RegionR2 5.027 1.017 0.99985 1.00000
RegionR3 -0.057 1.017 0.99999 1.00000
RegionR4 -4.496 1.017 0.99970 1.00000
RegionR5 -1.996 1.017 0.99978 1.00000
RegionR6 -0.023 1.017 0.99997 1.00000
RegionR7 2.205 1.017 0.99992 1.00000
RegionR8 2.695 1.017 0.99991 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.703 1.017 0.99990 1.00000
RegenerationR2 4.032 1.017 0.00242 0.07434
RegenerationR3 8.698 1.017 0.00002 0.00358
RegenerationR4 8.173 1.017 0.00010 0.00668
RegenerationR5 8.436 1.017 0.00000 0.00038
RegenerationR6 7.121 1.017 0.00016 0.01175
RegenerationBL 5.047 1.017 0.01266 0.11552
RegenerationTP 3.03 1.017 0.24730 0.69439


Genes with expression patterns similar to MligTC455_27022

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27022 27 0.57 Mlig455_020641

Neo: -

Age: -

Regeneration-enriched R3: 8.698
Regeneration-enriched R5: 8.436
Regeneration-enriched R4: 8.173

2 - - - - 1.000 1.000 Mlig455_020641 {REF} {Length: 249} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}
2. MligTC455_27023 111 2.31 Mlig455_019515, Mlig455_024490, Mlig455_029563

Neo: -

Age: -

1.888 - - - - 0.914 0.974

Mlig455_019515 {REF} {Length: 1882} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}

Mlig455_024490 {REF} {Length: 2099} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}

Mlig455_029563 {REF} {Length: 215} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}
3. MligTC455_09482 43 0.89 Mlig455_057221

Neo: -

Age: -

1.845 - - - - 0.861 0.984 Mlig455_057221 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_70094} {RNA815_13624.1}
4. MligTC455_29313 130 2.72 Mlig455_068886

Neo: -

Age: Down-Down-Up

SLC22A6 1.809 - - - - 0.958 0.851 Mlig455_068886 {REF} {Length: 2829} {Pfam: Sugar (and other) transporter [PF00083.26, score=91.7]; Major Facilitator Superfamily [PF07690.18, score=57.1]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=164, Expect=1e-43]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=157, Expect=7e-41]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=160, Expect=2e-42]; ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=154, Expect=6e-40]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=157, Expect=2e-41]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=134, Expect=3e-33]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=114, Expect=7e-27]} {RNA1509_13135} {RNA1310_6359.1} {RNA815_24636}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA