M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_09482

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09482 43 0.89 Mlig455_057221

Neo: -

Age: -

 Mlig455_057221 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_70094} {RNA815_13624.1}

Cumulative graph for MligTC455_09482

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.259 1.214 1.00000 1.00000
RegionR2 1.764 1.214 0.99997 1.00000
RegionR3 0.565 1.214 1.00000 1.00000
RegionR4 -1.398 1.214 0.99990 1.00000
RegionR5 0.02 1.214 0.99998 1.00000
RegionR6 0.551 1.214 0.99998 1.00000
RegionR7 0.507 1.214 0.99997 1.00000
RegionR8 0.25 1.214 0.99998 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.861 1.214 0.99999 1.00000
RegenerationR2 3.138 1.214 0.03097 0.28915
RegenerationR3 5.728 1.214 0.00159 0.06601
RegenerationR4 4.863 1.214 0.00311 0.07377
RegenerationR5 5.747 1.214 0.00010 0.01333
RegenerationR6 4.24 1.214 0.02735 0.20681
RegenerationBL 5.811 1.214 0.00217 0.03828
RegenerationTP 4.432 1.214 0.10042 0.49294


Genes with expression patterns similar to MligTC455_09482

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09482 43 0.89 Mlig455_057221

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_057221 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_70094} {RNA815_13624.1}
2. MligTC455_27022 27 0.57 Mlig455_020641

Neo: -

Age: -

Regeneration-enriched R3: 8.698
Regeneration-enriched R5: 8.436
Regeneration-enriched R4: 8.173

 1.845 - - - - 0.861 0.984 Mlig455_020641 {REF} {Length: 249} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}
3. MligTC455_27023 111 2.31 Mlig455_019515, Mlig455_024490, Mlig455_029563

Neo: -

Age: -

 1.788 - - - - 0.814 0.974

Mlig455_019515 {REF} {Length: 1882} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}

Mlig455_024490 {REF} {Length: 2099} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}

Mlig455_029563 {REF} {Length: 215} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}
4. MligTC455_30043 144 3 Mlig455_067016

Neo: -

Age: Up-Down-Up

 TMEM94 1.769 - - - - 0.812 0.957 Mlig455_067016 {REF} {Length: 5329} {Human: ENSG00000177728, TMEM94, transmembrane protein 94, [RH, Score=206, Expect=6e-53]} {Mouse: ENSMUSG00000020747, Tmem94, transmembrane protein 94, [RH, Score=205, Expect=6e-53]} {Dmel: FBgn0022153, l(2)k05819, lethal (2) k05819, [RH, Score=400, Expect=5e-117]} {Celegans: WBGene00017010, D1007.15, [RH, Score=189, Expect=2e-48]} {Smed: dd_Smed_v6_12358_0_1, dd_Smed_v6_12358_0_1, [RH, Score=325, Expect=5e-93]} {RNA1509_7674} {RNA1310_1886.2} {RNA815_651}
5. MligTC455_42743 64 1.32 Mlig455_011491

Neo: -

Age: -

Regeneration-upregulated BL: 6.392

Regeneration-enriched BL: 6.392

 SDF4 1.738 - - - 0.959 - 0.779 Mlig455_011491 {REF} {Length: 1498} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=64.3]; EF hand [PF13202.8, score=60.5]; EF-hand domain [PF13405.8, score=55.8]; EF hand [PF00036.34, score=52.6]; EF-hand domain pair [PF13833.8, score=34.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.5]} {Human: ENSG00000078808, SDF4, stromal cell derived factor 4, [RH, Score=124, Expect=8e-32]} {Mouse: ENSMUSG00000029076, Sdf4, stromal cell derived factor 4, [RH, Score=134, Expect=8e-36]} {Dmel: FBgn0051475, CG31475, [RH, Score=87.8, Expect=7e-19]} {Celegans: WBGene00016965, C56C10.9, [RH, Score=92.0, Expect=6e-21]} {Smed: dd_Smed_v6_9880_0_1, dd_Smed_v6_9880_0_1, [RH, Score=150, Expect=6e-42]} {RNA1509_24066} {RNA1310_21115} {RNA815_17056}
6. MligTC455_18991 10967 228.47 Mlig455_037440, Mlig455_037464, Mlig455_037503

Neo: -

Age: logFC(26M/2M)=-0.211

Regeneration-upregulated BL: 1.902

Regeneration-enriched BL: 1.902

 CHRNA6 0.989 - - - 0.989 - -

Mlig455_037440 {REF} {Length: 2692} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=70.7]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=47.1]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=112, Expect=5e-27]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=108, Expect=4e-25]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=108, Expect=2e-25]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=112, Expect=1e-26]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=110, Expect=3e-26]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=113, Expect=2e-27]} {RNA1509_24940, RNA1509_3092} {RNA1310_30196.2, RNA1509_24940} {RNA1509_24940, RNA815_25568}

Mlig455_037464 {REF} {Length: 2686} {RNA1509_3092} {RNA1310_30196.2} {RNA815_6516}

Mlig455_037503 {REF} {Length: 1172} {RNA1509_3092} {RNA1310_28554} {RNA815_6516}
7. MligTC455_53651 80 1.67 Mlig455_056106

Neo: -

Age: -

 TNFAIP8L3 0.985 - - - 0.985 - - Mlig455_056106 {REF} {Length: 2443} {Pfam: Domain of unknown function (DUF758) [PF05527.13, score=166.9]} {Human: ENSG00000183578, TNFAIP8L3, TNF alpha induced protein 8 like 3, [RH, Score=135, Expect=3e-39]} {Mouse: ENSMUSG00000074345, Tnfaip8l3, tumor necrosis factor, alpha-induced protein 8-like 3, [RH, Score=123, Expect=8e-35]; ENSMUSG00000062210, Tnfaip8, tumor necrosis factor, alpha-induced protein 8, [RH, Score=119, Expect=5e-33]} {Dmel: FBgn0034894, sigmar, salivary glands marred, [Score=83.6, Expect=9e-20]} {Smed: dd_Smed_v6_6451_0_1, dd_Smed_v6_6451_0_1, [RH, Score=137, Expect=8e-41]} {RNA1310_34371} {RNA815_33416}
8. MligTC455_13091 105 2.18 Mlig455_005443

Neo: -

Age: -

 0.984 - - - 0.984 - - Mlig455_005443 {REF} {Length: 2879} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=31.3]} {RNA1509_41201} {RNA1310_51571} {RNA815_38501}
9. MligTC455_19261 61 1.27 Mlig455_000335

Neo: -

Age: -

 ASCL5 0.981 - - - 0.981 - - Mlig455_000335 {REF} {Length: 1418} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=45.6]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=48.9, Expect=2e-06]; ENSG00000176009, ASCL3, achaete-scute family bHLH transcription factor 3, [Score=47.8, Expect=4e-06]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=48.9, Expect=1e-06]} {Dmel: FBgn0004170, sc, scute, [Score=56.2, Expect=8e-09]} {Celegans: WBGene00001950, hlh-3, Helix-loop-helix protein 3, [Score=47.4, Expect=2e-06]}
10. MligTC455_11888 142 2.96 Mlig455_065110

Neo: -

Age: -

 PCDH11X 0.979 - - - 0.979 - - Mlig455_065110 {REF} {Length: 4103} {Pfam: Cadherin domain [PF00028.19, score=207.8]; Cadherin-like [PF16184.7, score=34.7]; Cadherin-like [PF08266.14, score=23.4]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=273, Expect=3e-74]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=271, Expect=1e-73]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=278, Expect=6e-76]} {Dmel: FBgn0261574, kug, kugelei, [Score=177, Expect=4e-44]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=144, Expect=2e-34]} {Smed: dd_Smed_v6_12023_0_1, dd_Smed_v6_12023_0_1, [Score=322, Expect=1e-92]} {RNA1509_38191} {RNA1310_74429} {RNA815_12734}
11. MligTC455_15712 181 3.76 Mlig455_030495

Neo: -

Age: -

Region-enriched R8: 3.854/0.00430

 PAX6 0.979 - - - 0.979 - - Mlig455_030495 {REF} {Length: 4633} {Pfam: 'Paired box' domain [PF00292.20, score=231.0]; Homeodomain [PF00046.31, score=76.2]; Homeodomain-like domain [PF13384.8, score=21.2]} {Human: ENSG00000007372, PAX6, paired box 6, [RH, Score=259, Expect=5e-80]} {Mouse: ENSMUSG00000027168, Pax6, paired box 6, [RH, Score=258, Expect=2e-78]} {Dmel: FBgn0019650, toy, twin of eyeless, [RH, Score=243, Expect=6e-72]} {Celegans: WBGene00006870, vab-3, MAB-18, [RH, Score=236, Expect=2e-70]} {Smed: dd_Smed_v6_17726_0_1, dd_Smed_v6_17726_0_1, [RH, Score=431, Expect=9e-144]} {RNA1310_37223} {RNA815_52287.1}
12. MligTC455_31141 351 7.31 Mlig455_041599, Mlig455_041622

Neo: -

Age: -

 STK38L 0.978 - - - 0.978 - -

Mlig455_041599 {REF} {Length: 3957} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=98.5]; ABC1 atypical kinase-like domain [PF03109.18, score=29.7]; Protein kinase C terminal domain [PF00433.26, score=28.8]; Kinase-like [PF14531.8, score=19.4]} {Human: ENSG00000211455, STK38L, serine/threonine kinase 38 like, [RH, Score=645, Expect=0.0]; ENSG00000112079, STK38, serine/threonine kinase 38, [RH, Score=642, Expect=0.0]} {Mouse: ENSMUSG00000001630, Stk38l, serine/threonine kinase 38 like, [RH, Score=646, Expect=0.0]; ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=632, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_1, dd_Smed_v6_6462_0_1, [RH, Score=654, Expect=0.0]} {RNA1509_13967, RNA1509_26954} {RNA1310_13898.1, RNA1509_13967, RNA1509_26954} {RNA1509_13967, RNA1509_26954, RNA815_5091}

Mlig455_041622 {REF} {Length: 3421} {Pfam: Protein kinase domain [PF00069.27, score=67.5]; Protein kinase C terminal domain [PF00433.26, score=29.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=28.2]} {Human: ENSG00000211455, STK38L, serine/threonine kinase 38 like, [Score=285, Expect=2e-92]; ENSG00000112079, STK38, serine/threonine kinase 38, [Score=280, Expect=2e-90]} {Mouse: ENSMUSG00000001630, Stk38l, serine/threonine kinase 38 like, [Score=283, Expect=7e-92]; ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [Score=275, Expect=1e-88]} {Dmel: FBgn0003744, trc, tricornered, [Score=273, Expect=3e-88]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [Score=238, Expect=1e-74]} {Smed: dd_Smed_v6_6462_0_7, dd_Smed_v6_6462_0_7, [Score=282, Expect=8e-92]} {RNA1509_26954} {RNA1310_13898.1} {RNA815_5091}
13. MligTC455_37221 155 3.24 Mlig455_053581

Neo: -

Age: -

Region-enriched R8: 6.080/0.00000
Region-enriched R7: 4.687/0.00015

 FMNL3 0.978 - - - 0.978 - - Mlig455_053581 {REF} {Length: 3204} {Pfam: Formin Homology 2 Domain [PF02181.25, score=166.7]} {Human: ENSG00000161791, FMNL3, formin like 3, [Score=117, Expect=3e-26]; ENSG00000157827, FMNL2, formin like 2, [Score=117, Expect=6e-26]} {Mouse: ENSMUSG00000055805, Fmnl1, formin-like 1, [Score=127, Expect=2e-29]} {Dmel: FBgn0267795, Frl, Formin-like, [Score=103, Expect=4e-22]} {Celegans: WBGene00021698, frl-1, FRL (Formin Related gene in Leukocytes) homolog, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_3917_0_2, dd_Smed_v6_3917_0_2, [Score=79.0, Expect=1e-14]} {RNA1509_29857} {RNA1310_4919} {RNA815_9351}
14. MligTC455_53573 220 4.58 Mlig455_033230

Neo: -

Age: logFC(26M/2M)=-0.512

Region-enriched R8: 7.203/0.00000
Region-enriched R7: 4.245/0.02326

 LMNB1 0.978 - - - 0.978 - - Mlig455_033230 {REF} {Length: 2512} {Pfam: Intermediate filament protein [PF00038.23, score=183.5]; Lamin Tail Domain [PF00932.21, score=45.5]; Septation ring formation regulator, EzrA [PF06160.14, score=24.2]} {Human: ENSG00000113368, LMNB1, lamin B1, [Score=181, Expect=5e-49]; ENSG00000160789, LMNA, lamin A/C, [Score=177, Expect=2e-47]} {Mouse: ENSMUSG00000024590, Lmnb1, lamin B1, [Score=180, Expect=8e-49]; ENSMUSG00000028063, Lmna, lamin A, [Score=172, Expect=8e-46]} {Dmel: FBgn0002525, Lam, Lamin, [RH, Score=201, Expect=2e-56]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [RH, Score=404, Expect=3e-134]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_3449} {RNA1310_9642} {RNA815_3251.1}
15. MligTC455_33795 252 5.26 Mlig455_060633

Neo: -

Age: -

Region-enriched R8: 3.037/0.04043

 CNFN 0.977 - - - 0.977 - - Mlig455_060633 {REF} {Length: 1246} {Pfam: PLAC8 family [PF04749.19, score=60.7]} {Human: ENSG00000105427, CNFN, cornifelin, [RH, Score=70.9, Expect=2e-16]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [RH, Score=70.9, Expect=2e-16]} {Smed: dd_Smed_v6_3182_0_1, dd_Smed_v6_3182_0_1, [RH, Score=85.1, Expect=3e-22]} {RNA1509_9786} {RNA1310_42064} {RNA815_27081}
16. MligTC455_37220 580 12.09 Mlig455_052567, Mlig455_065350

Neo: -

Age: -

Region-enriched R8: 7.789/0.00000
Region-enriched R7: 5.042/0.00003

 FMNL1, FMNL3 0.977 - - - 0.977 - -

Mlig455_052567 {REF} {Length: 3222} {Pfam: Formin Homology 2 Domain [PF02181.25, score=164.8]} {Human: ENSG00000161791, FMNL3, formin like 3, [Score=115, Expect=2e-25]; ENSG00000184922, FMNL1, formin like 1, [Score=113, Expect=4e-25]; ENSG00000157827, FMNL2, formin like 2, [Score=112, Expect=1e-24]} {Mouse: ENSMUSG00000055805, Fmnl1, formin-like 1, [Score=121, Expect=1e-27]; ENSMUSG00000023008, Fmnl3, formin-like 3, [Score=118, Expect=2e-26]} {Dmel: FBgn0267795, Frl, Formin-like, [Score=101, Expect=2e-21]} {Celegans: WBGene00021698, frl-1, FRL (Formin Related gene in Leukocytes) homolog, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_3917_0_2, dd_Smed_v6_3917_0_2, [Score=79.0, Expect=8e-15]} {RNA1509_29857, RNA1509_51590} {RNA1310_4919, RNA1509_29857, RNA1509_51590} {RNA1509_29857, RNA1509_51590, RNA815_9351}

Mlig455_065350 {REF} {Length: 3132} {Pfam: Formin Homology 2 Domain [PF02181.25, score=113.1]} {Human: ENSG00000184922, FMNL1, formin like 1, [Score=84.7, Expect=9e-18]; ENSG00000157827, FMNL2, formin like 2, [Score=84.0, Expect=2e-17]; ENSG00000161791, FMNL3, formin like 3, [Score=83.2, Expect=5e-17]} {Mouse: ENSMUSG00000055805, Fmnl1, formin-like 1, [Score=93.6, Expect=1e-20]} {Dmel: FBgn0025641, DAAM, Dishevelled Associated Activator of Morphogenesis, [Score=67.8, Expect=3e-12]} {Smed: dd_Smed_v6_2533_0_1, dd_Smed_v6_2533_0_1, [Score=56.6, Expect=9e-09]} {RNA1509_51590} {RNA1310_4919} {RNA815_16059}
17. MligTC455_53572 2350 48.96 Mlig455_010811

Neo: -

Age: Down-Up-Down

Region-enriched R8: 7.256/0.00000
Region-enriched R7: 4.354/0.00000

 LMNB1 0.976 - - - 0.976 - - Mlig455_010811 {REF} {Length: 2584} {Pfam: Intermediate filament protein [PF00038.23, score=182.9]; Lamin Tail Domain [PF00932.21, score=45.3]; Septation ring formation regulator, EzrA [PF06160.14, score=24.8]} {Human: ENSG00000113368, LMNB1, lamin B1, [Score=182, Expect=7e-49]; ENSG00000160789, LMNA, lamin A/C, [Score=177, Expect=6e-47]} {Mouse: ENSMUSG00000024590, Lmnb1, lamin B1, [Score=180, Expect=2e-48]; ENSMUSG00000028063, Lmna, lamin A, [Score=172, Expect=2e-45]} {Dmel: FBgn0002525, Lam, Lamin, [RH, Score=201, Expect=9e-56]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [RH, Score=403, Expect=7e-133]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_3449} {RNA1310_9642} {RNA815_3251.1}
18. MligTC455_24662 42 0.88 Mlig455_047950

Neo: -

Age: -

 URGCP 0.975 - - - 0.975 - - Mlig455_047950 {REF} {Length: 5366} {Pfam: Dynamin family [PF00350.25, score=28.9]; Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.9]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=24.2]; 50S ribosome-binding GTPase [PF01926.25, score=22.3]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=155, Expect=8e-38]} {Mouse: ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=312, Expect=5e-86]; ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=312, Expect=5e-86]} {RNA1509_25042} {RNA1310_285} {RNA815_97.1}
19. MligTC455_45598 1174 24.46 Mlig455_020219

Neo: -

Age: Up-Down-Down

Region-enriched R8: 4.023/0.00000

 0.975 - - - 0.975 - - Mlig455_020219 {REF} {Length: 4562} {RNA1509_16423} {RNA1310_11001} {RNA815_16188}
20. MligTC455_39032 286 5.97 Mlig455_066090

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.631

Region-enriched R7: 5.035/0.00000
Region-enriched R6: 4.218/0.00008
Region-enriched R8: 3.725/0.04169

 0.972 - - - 0.972 - - Mlig455_066090 {REF} {Length: 1100} {RNA1310_36475} {RNA815_20267}
21. MligTC455_44781 316 6.59 Mlig455_034005, Mlig455_060385

Neo: -

Age: -

 0.972 - - - 0.972 - -

Mlig455_034005 {REF} {Length: 3206} {RNA1509_24113} {RNA1310_4423} {RNA815_4918.1}

Mlig455_060385 {REF} {Length: 3645} {RNA1509_24113} {RNA1310_4423} {RNA815_4918.1}
22. MligTC455_37455 79 1.65 Mlig455_002527

Neo: -

Age: -

 IRX6 0.971 - - - 0.971 - - Mlig455_002527 {REF} {Length: 1810} {Pfam: Homeobox KN domain [PF05920.13, score=52.3]; Homeodomain [PF00046.31, score=30.7]} {Human: ENSG00000159387, IRX6, iroquois homeobox 6, [RH, Score=143, Expect=3e-37]; ENSG00000170561, IRX2, iroquois homeobox 2, [RH, Score=139, Expect=2e-35]} {Mouse: ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [RH, Score=142, Expect=6e-37]} {Dmel: FBgn0014343, mirr, mirror, [RH, Score=152, Expect=1e-39]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=120, Expect=8e-30]} {Smed: dd_Smed_v6_11500_0_1, dd_Smed_v6_11500_0_1, [RH, Score=183, Expect=6e-53]} {RNA1310_100283}
23. MligTC455_44780 158 3.3 Mlig455_033996

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_033996 {REF} {Length: 3484} {RNA1509_24113} {RNA1310_4423, RNA1509_24113} {RNA1509_24113, RNA815_4918.1}
24. MligTC455_26403 211 4.39 Mlig455_042094

Neo: -

Age: Down-Down-Up

 0.969 - - - 0.969 - - Mlig455_042094 {REF} {Length: 2243} {TRANSSPLICED} {RNA1509_47973} {RNA1310_48875} {RNA815_24752}
25. MligTC455_45908 12042 250.87 Mlig455_024683, Mlig455_044066

Neo: -

Age: Down-Up-Up

Regeneration-upregulated BL: 1.085

Regeneration-enriched BL: 1.085

 0.968 - - - 0.968 - -

Mlig455_024683 {REF} {Length: 2263} {RNA1509_24674, RNA1509_2704} {RNA1310_28299.1, RNA1509_24674, RNA1509_2704} {RNA1509_24674, RNA1509_2704, RNA815_13103}

Mlig455_044066 {REF} {Length: 1264} {RNA1509_12941, RNA1509_48414} {RNA1310_28299.1, RNA1509_12941, RNA1509_48414} {RNA1509_12941, RNA1509_48414, RNA815_13103}
26. MligTC455_17107 580 12.09 Mlig455_045133

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_045133 {REF} {Length: 538} {NoTransDecoderORF} {RNA1509_43096} {RNA1310_31487.2} {RNA815_12479}
27. MligTC455_17358 192 4.01 Mlig455_015662

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_015662 {REF} {Length: 1607} {Pfam: Sleepless protein [PF17064.7, score=23.4]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=75.5, Expect=8e-18]} {RNA1509_21460, RNA1509_36891} {RNA1310_16370, RNA1509_36891} {RNA1509_36891, RNA815_12658}
28. MligTC455_33966 34 0.72 Mlig455_032703

Neo: -

Age: -

 0.964 - - - 0.964 - - Mlig455_032703 {REF} {Length: 907} {Pfam: F5/8 type C domain [PF00754.27, score=32.8]} {Dmel: FBgn0001083, fw, furrowed, [Score=46.6, Expect=8e-06]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=53.1, Expect=4e-09]} {RNA1509_42117} {RNA1310_82261} {RNA815_54270}
29. MligTC455_16034 544 11.33 Mlig455_061559

Neo: -

Age: -

Region-enriched R8: 4.432/0.00000
Region-enriched R7: 2.838/0.00242

 CASP7 0.963 - - - 0.963 - - Mlig455_061559 {REF} {Length: 5521} {Pfam: Caspase domain [PF00656.24, score=76.9]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=85.1, Expect=5e-17]; ENSG00000003400, CASP10, caspase 10, [Score=81.3, Expect=3e-15]; ENSG00000164305, CASP3, caspase 3, [Score=80.9, Expect=5e-16]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=82.8, Expect=1e-16]; ENSMUSG00000031628, Casp3, caspase 3, [Score=80.1, Expect=6e-16]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=75.1, Expect=4e-14]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=82.8, Expect=4e-17]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=89.4, Expect=1e-19]} {RNA1509_47042} {RNA1310_6014.2, RNA1509_47042} {RNA1509_47042, RNA815_17780}
30. MligTC455_24495 699 14.55 Mlig455_026411

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.047

Region-enriched R8: 6.835/0.00000
Region-enriched R7: 6.400/0.00000
Region-enriched R6: 4.047/0.00024

 0.963 - - - 0.963 - - Mlig455_026411 {REF} {Length: 1134} {RNA1509_9617} {RNA1310_33732} {RNA815_14842}
31. MligTC455_16222 431 8.99 Mlig455_033888, Mlig455_054116

Neo: -

Age: logFC(26M/2M)=0.990

Region-enriched R8: 3.408/0.00045
Region-enriched R7: 2.502/0.03357

 0.961 - - - 0.961 - -

Mlig455_033888 {REF} {Length: 1217} {RNA1310_29964} {RNA815_15923}

Mlig455_054116 {REF} {Length: 1404} {RNA1310_29964} {RNA815_15923}
32. MligTC455_51674 544 11.33 Mlig455_005146

Neo: -

Age: -

 BMPER 0.961 - - - 0.961 - - Mlig455_005146 {REF} {Length: 3361} {Pfam: von Willebrand factor type C domain [PF00093.20, score=64.3]; von Willebrand factor type D domain [PF00094.27, score=56.9]} {Human: ENSG00000164619, BMPER, BMP binding endothelial regulator, [RH, Score=233, Expect=2e-66]} {Mouse: ENSMUSG00000031963, Bmper, BMP-binding endothelial regulator, [RH, Score=239, Expect=5e-69]} {Dmel: FBgn0000395, cv-2, crossveinless 2, [RH, Score=246, Expect=5e-71]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=89.7, Expect=3e-18]} {RNA1509_15055} {RNA1310_5658, RNA1509_15055} {RNA1509_15055, RNA815_2184}
33. MligTC455_51675 542 11.29 Mlig455_021608

Neo: -

Age: -

 0.961 - - - 0.961 - - Mlig455_021608 {REF} {Length: 1190} {RNA1509_15055} {RNA1310_5658} {RNA815_21910}
34. MligTC455_24496 662 13.79 Mlig455_038081

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.244

Region-enriched R8: 6.186/0.00000
Region-enriched R7: 5.495/0.00000
Region-enriched R6: 3.265/0.00016

 0.96 - - - 0.960 - - Mlig455_038081 {REF} {Length: 1293} {RNA1509_9617} {RNA1310_33130} {RNA815_14842}
35. MligTC455_15460 271 5.65 Mlig455_001644, Mlig455_001708

Neo: -

Age: -

Region-enriched R8: 3.592/0.03504
Region-enriched R7: 3.324/0.02643

 0.958 - - - 0.958 - -

Mlig455_001644 {REF} {Length: 1595} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=28.7]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [Score=137, Expect=2e-36]} {RNA1509_56048} {RNA1310_10124} {RNA815_17803}

Mlig455_001708 {REF} {Length: 2658} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=151.7]} {Celegans: WBGene00022815, asic-1, Degenerin-like protein asic-1, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_28097_0_1, dd_Smed_v6_28097_0_1, [Score=332, Expect=4e-107]} {RNA1509_56048} {RNA1310_10124, RNA1509_56048} {RNA1509_56048, RNA815_17803}
36. MligTC455_18435 9269 193.11 Mlig455_014347

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.183/0.00044

Regeneration-upregulated BL: 2.442

Regeneration-enriched BL: 2.442

 CALU 0.958 - - - 0.958 - - Mlig455_014347 {REF} {Length: 1728} {Pfam: EF hand [PF00036.34, score=79.6]; EF-hand domain pair [PF13499.8, score=68.8]; EF hand [PF13202.8, score=67.1]; EF-hand domain [PF13405.8, score=60.5]; EF-hand domain pair [PF13833.8, score=48.8]} {Human: ENSG00000128595, CALU, calumenin, [Score=158, Expect=3e-45]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=159, Expect=1e-45]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=167, Expect=8e-49]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=184, Expect=8e-56]} {Smed: dd_Smed_v6_990_0_1, dd_Smed_v6_990_0_1, [Score=152, Expect=2e-43]} {RNA1509_1603} {RNA1310_4377, RNA1509_1603} {RNA1509_1603, RNA815_1364}
37. MligTC455_18434 9033 188.19 Mlig455_014292

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.156/0.00095

Regeneration-upregulated BL: 2.404

Regeneration-enriched BL: 2.404

 RCN3 0.956 - - - 0.956 - - Mlig455_014292 {REF} {Length: 1587} {Pfam: EF hand [PF13202.8, score=46.5]; EF hand [PF00036.34, score=42.4]; EF-hand domain pair [PF13499.8, score=36.7]; EF-hand domain [PF13405.8, score=29.8]; EF-hand domain pair [PF13833.8, score=25.5]} {Human: ENSG00000142552, RCN3, reticulocalbin 3, [Score=92.8, Expect=2e-21]} {Mouse: ENSMUSG00000019539, Rcn3, reticulocalbin 3, EF-hand calcium binding domain, [Score=91.7, Expect=3e-21]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=97.4, Expect=2e-23]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=95.1, Expect=7e-23]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=85.9, Expect=1e-19]} {RNA1509_1603} {RNA1310_4377} {RNA815_1364}
38. MligTC455_38265 143 2.98 Mlig455_039090

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_039090 {REF} {Length: 4345} {TRANSSPLICED} {RNA1509_15078} {RNA1310_14187, RNA1509_15078} {RNA1509_15078, RNA815_5249}
39. MligTC455_52651 91 1.9 Mlig455_009805, Mlig455_013651

Neo: Germline

Age: -

Region-enriched R7: 4.780/0.00000

 0.956 - - - 0.956 - -

Mlig455_009805 {REF} {Length: 1616} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=92.2]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=216, Expect=3e-63]} {RNA1509_24311} {RNA1310_27350} {RNA815_49943}

Mlig455_013651 {REF} {Length: 2472} {Pfam: Mab-21 protein [PF03281.16, score=26.3]} {RNA1509_12507} {RNA1310_77275} {RNA815_2305}
40. MligTC455_24661 112 2.33 Mlig455_019924

Neo: -

Age: Down-Up-Down

Region-enriched R8: 5.668/0.00712

 URGCP 0.954 - - - 0.954 - - Mlig455_019924 {REF} {Length: 10713} {TRANSSPLICED} {Pfam: Dynamin family [PF00350.25, score=30.5]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=23.0]; 50S ribosome-binding GTPase [PF01926.25, score=21.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=171, Expect=3e-42]} {Mouse: ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=397, Expect=5e-111]; ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=397, Expect=5e-111]} {RNA1509_14577, RNA1509_25042, RNA1509_25783, RNA1509_41509, RNA1509_46967, RNA1509_6932} {RNA1310_285, RNA1509_14577, RNA1509_25042, RNA1509_25783, RNA1509_41509, RNA1509_46967, RNA1509_6932} {RNA1509_14577, RNA1509_25042, RNA1509_25783, RNA1509_41509, RNA1509_46967, RNA1509_6932, RNA815_97.1}
41. MligTC455_26895 197 4.1 Mlig455_013036

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.303

Region-enriched R4: 5.042/0.00003
Region-enriched R5: 3.848/0.00004
Region-enriched R6: 3.112/0.01142

 0.954 - - - - - 0.954 Mlig455_013036 {REF} {Length: 2567} {RNA1509_16883} {RNA1310_7853.1} {RNA815_5910}
42. MligTC455_07107 177 3.68 Mlig455_037410

Neo: -

Age: -

Region-enriched R8: 7.446/0.00923

 0.953 - - - 0.953 - - Mlig455_037410 {REF} {Length: 2565} {RNA1509_34967} {RNA1310_16201, RNA1509_34967} {RNA1509_34967, RNA815_28129}
43. MligTC455_21641 362 7.53 Mlig455_052610

Neo: Irradiation

Age: -

 SLC6A5 0.953 - - - 0.953 - - Mlig455_052610 {REF} {Length: 3682} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=239.7]; BTB/POZ domain [PF00651.33, score=60.3]; BTB And C-terminal Kelch [PF07707.17, score=45.9]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.0]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=192, Expect=1e-50]; ENSG00000196517, SLC6A9, solute carrier family 6 member 9, [Score=189, Expect=3e-50]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=191, Expect=1e-50]; ENSMUSG00000028542, Slc6a9, solute carrier family 6 (neurotransmitter transporter, glycine), member 9, [Score=183, Expect=7e-51]} {Dmel: FBgn0034911, CG5549, [Score=203, Expect=4e-54]} {Celegans: WBGene00004905, snf-6, Sodium-dependent acetylcholine transporter, [Score=173, Expect=4e-45]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=191, Expect=2e-51]} {RNA1509_27437} {RNA1310_11200.1} {RNA815_3821}
44. MligTC455_19090 545 11.36 Mlig455_002101

Neo: -

Age: Down-Down-Up

 0.951 - - - 0.951 - - Mlig455_002101 {REF} {Length: 2098} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=43.2]; Tight junction protein, Claudin-like [PF06653.13, score=21.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.4]; Protein of unknown function (DUF2723) [PF11028.10, score=20.4]} {Dmel: FBgn0013720, pck, pickel, [Score=102, Expect=7e-26]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [Score=160, Expect=3e-48]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192}
45. MligTC455_43009 84 1.76 Mlig455_028315

Neo: -

Age: -

 NKX1-1 0.951 - - - 0.951 - - Mlig455_028315 {REF} {Length: 3063} {Pfam: Homeodomain [PF00046.31, score=75.2]} {Human: ENSG00000235608, NKX1-1, NK1 homeobox 1, [Score=140, Expect=6e-38]; ENSG00000229544, NKX1-2, NK1 homeobox 2, [Score=134, Expect=3e-36]} {Mouse: ENSMUSG00000029112, Nkx1-1, NK1 homeobox 1, [Score=146, Expect=2e-40]} {Dmel: FBgn0002941, slou, slouch, [RH, Score=152, Expect=2e-41]} {Celegans: WBGene00000428, ceh-1, Homeobox protein ceh-1, [Score=132, Expect=9e-38]} {Smed: dd_Smed_v6_19327_0_1, dd_Smed_v6_19327_0_1, [Score=145, Expect=1e-40]} {RNA1310_40325} {RNA815_61269}
46. MligTC455_52186 74 1.54 Mlig455_052561

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_052561 {REF} {Length: 2048} {TRANSSPLICED} {RNA1509_39228} {RNA1310_14919.1} {RNA815_10182}
47. MligTC455_15687 189 3.94 Mlig455_064847

Neo: -

Age: Down-Up-Up

 DUS2 0.95 - - - - 0.950 - Mlig455_064847 {REF} {Length: 2127} {TRANSSPLICED} {Pfam: Dihydrouridine synthase (Dus) [PF01207.19, score=166.1]} {Human: ENSG00000167264, DUS2, dihydrouridine synthase 2, [RH, Score=392, Expect=2e-132]} {Mouse: ENSMUSG00000031901, Dus2, dihydrouridine synthase 2, [RH, Score=402, Expect=2e-136]} {Dmel: FBgn0030554, CG1434, [RH, Score=331, Expect=4e-109]} {Celegans: WBGene00013201, dus-2, DihydroUridine Synthase two homolog, [RH, Score=244, Expect=6e-76]} {Smed: dd_Smed_v6_5568_0_2, dd_Smed_v6_5568_0_2, [RH, Score=362, Expect=2e-121]} {RNA1509_14639, RNA1509_33967} {RNA1310_11776.1, RNA1509_33967} {RNA1509_33967, RNA815_4191}
48. MligTC455_19371 6012 125.25 Mlig455_032520, Mlig455_068695, Mlig455_068722

Neo: -

Age: -

 DNAJC25 0.95 - - - 0.950 - -

Mlig455_032520 {REF} {Length: 2597} {Pfam: DnaJ domain [PF00226.33, score=50.5]} {Human: ENSG00000059769, DNAJC25, DnaJ heat shock protein family (Hsp40) member C25, [Score=160, Expect=6e-47]} {Mouse: ENSMUSG00000070972, Dnajc25, DnaJ heat shock protein family (Hsp40) member C25, [Score=159, Expect=2e-46]} {Dmel: FBgn0030658, CG7872, [Score=172, Expect=6e-52]} {Celegans: WBGene00001020, dnj-2, DnaJ homolog dnj-2, [Score=127, Expect=1e-34]} {Smed: dd_Smed_v6_3301_0_1, dd_Smed_v6_3301_0_1, [Score=253, Expect=2e-83]} {RNA1509_9406} {RNA1310_7548} {RNA815_15350.1}

Mlig455_068695 {REF} {Length: 2794} {Pfam: DnaJ domain [PF00226.33, score=70.8]} {Human: ENSG00000059769, DNAJC25, DnaJ heat shock protein family (Hsp40) member C25, [RH, Score=241, Expect=8e-77]} {Mouse: ENSMUSG00000070972, Dnajc25, DnaJ heat shock protein family (Hsp40) member C25, [RH, Score=241, Expect=7e-77]} {Dmel: FBgn0030658, CG7872, [RH, Score=235, Expect=5e-75]} {Celegans: WBGene00001020, dnj-2, DnaJ homolog dnj-2, [RH, Score=215, Expect=3e-67]} {Smed: dd_Smed_v6_3301_0_1, dd_Smed_v6_3301_0_1, [RH, Score=350, Expect=4e-120]} {RNA1509_42587, RNA1509_9209, RNA1509_9406} {RNA1310_7548, RNA1509_42587, RNA1509_9406} {RNA1509_42587, RNA1509_9406, RNA815_10433}

Mlig455_068722 {REF} {Length: 2649} {Pfam: DnaJ domain [PF00226.33, score=70.8]} {Human: ENSG00000059769, DNAJC25, DnaJ heat shock protein family (Hsp40) member C25, [RH, Score=244, Expect=8e-78]} {Mouse: ENSMUSG00000070972, Dnajc25, DnaJ heat shock protein family (Hsp40) member C25, [RH, Score=243, Expect=6e-78]} {Dmel: FBgn0030658, CG7872, [RH, Score=238, Expect=5e-76]} {Celegans: WBGene00001020, dnj-2, DnaJ homolog dnj-2, [RH, Score=217, Expect=4e-68]} {Smed: dd_Smed_v6_3301_0_1, dd_Smed_v6_3301_0_1, [RH, Score=352, Expect=4e-121]} {RNA1509_9209} {RNA1310_7548, RNA1509_9209} {RNA1509_9209, RNA815_10433}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA