TomoSeq data search

Data search

Results for MligTC455_27087

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27087

42

0.88

Mlig455_032740

Neo: -

Age: -

Mlig455_032740 {REF} {Length: 3843} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}

Cumulative graph for MligTC455_27087

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.704	0.997	0.99991	1.00000
RegionR2	0.996	0.997	0.99996	1.00000
RegionR3	0.657	0.997	0.99999	1.00000
RegionR4	-0.844	0.997	0.99985	1.00000
RegionR5	0.274	0.997	0.99996	1.00000
RegionR6	0.353	0.997	0.99999	1.00000
RegionR7	0.298	0.997	0.99997	1.00000
RegionR8	-0.031	0.997	0.99999	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.693	0.997	0.99999	1.00000
RegenerationR2	3.534	0.997	0.01596	0.20764
RegenerationR3	3.326	0.997	0.09369	0.49212
RegenerationR4	3.908	0.997	0.01873	0.21479
RegenerationR5	2.9	0.997	0.05358	0.37144
RegenerationR6	4.167	0.997	0.03448	0.23290
RegenerationBL	4.135	0.997	0.05353	0.26750
RegenerationTP	4.946	0.997	0.05984	0.39669

Genes with expression patterns similar to MligTC455_27087

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27087	42	0.88	Mlig455_032740	Neo: - Age: -		3	-	-	-	1.000	1.000	1.000	Mlig455_032740 {REF} {Length: 3843} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
2.	MligTC455_40463	120	2.51	Mlig455_028008	Neo: - Age: -		0.969	-	-	-	0.969	-	-	Mlig455_028008 {REF} {Length: 67} {NoTransDecoderORF} {RNA1509_5045} {RNA1310_14222} {RNA815_350}
3.	MligTC455_52714	98	2.04	Mlig455_002830	Neo: - Age: -		0.967	-	-	-	0.967	-	-	Mlig455_002830 {REF} {Length: 541} {NoTransDecoderORF} {RNA1310_103263}
4.	MligTC455_21105	23	0.48	Mlig455_012701	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.083		0.964	-	-	-	-	0.964	-	Mlig455_012701 {REF} {Length: 3465} {Pfam: WSC domain [PF01822.21, score=210.5]} {RNA1509_16643} {RNA1310_56698} {RNA815_15048}
5.	MligTC455_16679	20	0.41	Mlig455_040992	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_040992 {REF} {Length: 899} {NoTransDecoderORF} {RNA1509_18694} {RNA1310_136985} {RNA815_187}
6.	MligTC455_18850	747	15.56	Mlig455_066916	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_066916 {REF} {Length: 1443} {TRANSSPLICED} {Pfam: SUZ domain [PF12752.9, score=43.3]} {RNA1509_41034} {RNA1310_22799} {RNA815_9711.1}
7.	MligTC455_13444	381	7.94	Mlig455_068853	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.519		0.95	-	-	-	-	-	0.950	Mlig455_068853 {REF} {Length: 1499} {RNA1509_59159} {RNA1310_70014.1} {RNA815_29540}
8.	MligTC455_35898	50	1.03	Mlig455_046691	Neo: Int S/G2/M Age: -	GLRA2	0.95	-	-	-	-	-	0.950	Mlig455_046691 {REF} {Length: 3431} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=117.4]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=295, Expect=3e-92]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=293, Expect=8e-92]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=288, Expect=9e-90]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=283, Expect=3e-88]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=293, Expect=4e-92]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=293, Expect=2e-91]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=287, Expect=9e-90]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=285, Expect=6e-89]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [RH, Score=339, Expect=8e-108]} {Celegans: WBGene00017389, lgc-38, Ligand-Gated ion Channel, [RH, Score=319, Expect=4e-102]} {Smed: dd_Smed_v6_25116_0_1, dd_Smed_v6_25116_0_1, [Score=260, Expect=6e-79]} {RNA1509_44454} {RNA1310_46886} {RNA815_31553}

Berezikov Lab - 2020-2021 © ERIBA