Data search
Results for MligTC455_35898
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35898 | 50 | 1.03 | Mlig455_046691 | Neo: Int S/G2/M Age: - |
GLRA2 | Mlig455_046691 {REF} {Length: 3431} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=117.4]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=295, Expect=3e-92]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=293, Expect=8e-92]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=288, Expect=9e-90]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=283, Expect=3e-88]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=293, Expect=4e-92]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=293, Expect=2e-91]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=287, Expect=9e-90]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=285, Expect=6e-89]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [RH, Score=339, Expect=8e-108]} {Celegans: WBGene00017389, lgc-38, Ligand-Gated ion Channel, [RH, Score=319, Expect=4e-102]} {Smed: dd_Smed_v6_25116_0_1, dd_Smed_v6_25116_0_1, [Score=260, Expect=6e-79]} {RNA1509_44454} {RNA1310_46886} {RNA815_31553} |
Cumulative graph for MligTC455_35898
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.891 | 1.506 | 1.00000 | 1.00000 | |
| RegionR2 | -1.216 | 1.506 | 0.90903 | 1.00000 | |
| RegionR3 | 3.217 | 1.506 | 0.00580 | 0.10561 | |
| RegionR4 | 3.25 | 1.506 | 0.02608 | 0.12300 | |
| RegionR5 | 1.53 | 1.506 | 0.20999 | 0.50597 | |
| RegionR6 | 0.582 | 1.506 | 0.53956 | 1.00000 | |
| RegionR7 | -2.761 | 1.506 | 0.99977 | 1.00000 | |
| RegionR8 | -2.711 | 1.506 | 0.99980 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.27 | 1.506 | 0.99997 | 1.00000 | |
| RegenerationR2 | 1.77 | 1.506 | 0.17311 | 0.61307 | |
| RegenerationR3 | -1.219 | 1.506 | 0.22332 | 0.65874 | |
| RegenerationR4 | -1.19 | 1.506 | 0.31729 | 0.75635 | |
| RegenerationR5 | 1.334 | 1.506 | 0.16386 | 0.58873 | |
| RegenerationR6 | 0.751 | 1.506 | 0.56222 | 0.84696 | |
| RegenerationBL | 4.301 | 1.506 | 0.01543 | 0.13105 | |
| RegenerationTP | 2.952 | 1.506 | 0.29596 | 0.74126 |
Genes with expression patterns similar to MligTC455_35898
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35898 | 50 | 1.03 | Mlig455_046691 | Neo: Int S/G2/M Age: - |
GLRA2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046691 {REF} {Length: 3431} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=117.4]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=295, Expect=3e-92]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=293, Expect=8e-92]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=288, Expect=9e-90]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=283, Expect=3e-88]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=293, Expect=4e-92]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=293, Expect=2e-91]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=287, Expect=9e-90]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=285, Expect=6e-89]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [RH, Score=339, Expect=8e-108]} {Celegans: WBGene00017389, lgc-38, Ligand-Gated ion Channel, [RH, Score=319, Expect=4e-102]} {Smed: dd_Smed_v6_25116_0_1, dd_Smed_v6_25116_0_1, [Score=260, Expect=6e-79]} {RNA1509_44454} {RNA1310_46886} {RNA815_31553} |
| 2. | MligTC455_39499 | 57 | 1.2 | Mlig455_055885 | Neo: - Age: Down-Up-Down |
1.782 | - | - | - | - | 0.968 | 0.814 | Mlig455_055885 {REF} {Length: 1825} {RNA1509_57109} {RNA1310_41803} {RNA815_14653.1} | |
| 3. | MligTC455_33681 | 39 | 0.81 | Mlig455_031580 | Neo: - Age: - |
0.969 | - | - | - | 0.969 | - | - | Mlig455_031580 {REF} {Length: 800} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_5882} {RNA1310_45936} {RNA815_7800} | |
| 4. | MligTC455_42716 | 464 | 9.66 | Mlig455_045368 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.373/0.00197 |
NUDT6 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_045368 {REF} {Length: 2152} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=61.0]; Nudix hydrolase domain [PF18290.3, score=40.3]} {Human: ENSG00000170917, NUDT6, nudix hydrolase 6, [Score=103, Expect=2e-25]} {Mouse: ENSMUSG00000050174, Nudt6, nudix (nucleoside diphosphate linked moiety X)-type motif 6, [Score=110, Expect=9e-28]} {Dmel: FBgn0030668, CG8128, [RH, Score=125, Expect=1e-33]} {Celegans: WBGene00003578, ndx-1, Putative nudix hydrolase 1, [Score=47.4, Expect=6e-06]} {Smed: dd_Smed_v6_14055_0_1, dd_Smed_v6_14055_0_1, [Score=97.1, Expect=1e-23]} {RNA1509_47695} {RNA1310_29172} {RNA815_14916} |
| 5. | MligTC455_24560 | 145 | 3.02 | Mlig455_038748, Mlig455_068439 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_038748 {REF} {Length: 4495} {TRANSSPLICED} {Pfam: Otopetrin [PF03189.15, score=226.0]} {Dmel: FBgn0259150, CG42265, [Score=212, Expect=4e-56]} {Celegans: WBGene00018478, otpl-5, OToPetrin-Like, [RH, Score=143, Expect=1e-35]} {Smed: dd_Smed_v6_15458_0_1, dd_Smed_v6_15458_0_1, [Score=256, Expect=3e-72]} {RNA1509_17380} {RNA1310_2108} {RNA815_4696} Mlig455_068439 {REF} {Length: 4947} {Pfam: Otopetrin [PF03189.15, score=222.2]} {Dmel: FBgn0259150, CG42265, [Score=205, Expect=5e-54]} {Celegans: WBGene00018478, otpl-5, OToPetrin-Like, [RH, Score=141, Expect=8e-35]} {Smed: dd_Smed_v6_15458_0_1, dd_Smed_v6_15458_0_1, [Score=251, Expect=2e-70]} {RNA1509_17380} {RNA1310_2108, RNA1509_17380} {RNA1509_17380, RNA815_4696} |
|
| 6. | MligTC455_14954 | 32 | 0.66 | Mlig455_051468, Mlig455_066698 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_051468 {REF} {Length: 741} {NoTransDecoderORF} Mlig455_066698 {REF} {Length: 2055} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=41.2, Expect=1e-05]} {RNA1509_10844} {RNA1310_32662} {RNA815_30370} |
|
| 7. | MligTC455_28813 | 218 | 4.54 | Mlig455_019156 | Neo: - Age: logFC(26M/2M)=0.373 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_019156 {REF} {Length: 2511} {TRANSSPLICED} {RNA1509_7400} {RNA1310_16040.1} {RNA815_8063.1} | |
| 8. | MligTC455_49621 | 739 | 15.39 | Mlig455_057985 | Neo: - Age: logFC(26M/2M)=0.320 |
SFT2D2 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_057985 {REF} {Length: 2439} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=100.2]} {Human: ENSG00000213064, SFT2D2, SFT2 domain containing 2, [Score=181, Expect=2e-58]} {Mouse: ENSMUSG00000040848, Sft2d2, SFT2 domain containing 2, [Score=179, Expect=7e-58]} {Dmel: FBgn0037009, CG5104, [Score=174, Expect=5e-56]} {Celegans: WBGene00009191, F27D4.7, Vesicle transport protein, [Score=82.0, Expect=4e-20]} {Smed: dd_Smed_v6_3839_0_1, dd_Smed_v6_3839_0_1, [Score=179, Expect=2e-58]} {RNA1509_15408} {RNA1310_54102.1} {RNA815_20933} |
| 9. | MligTC455_35520 | 80 | 1.67 | Mlig455_014702 | Neo: - Age: logFC(26M/2M)=0.557 Region-enriched R4: 4.213/0.03157 |
SLC44A2 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_014702 {REF} {Length: 3061} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=312.8]} {Human: ENSG00000129353, SLC44A2, solute carrier family 44 member 2, [Score=436, Expect=9e-143]} {Mouse: ENSMUSG00000057193, Slc44a2, solute carrier family 44, member 2, [Score=451, Expect=1e-148]} {Dmel: FBgn0039637, Ctl2, Choline transporter-like 2, [Score=315, Expect=4e-96]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=374, Expect=3e-119]} {Smed: dd_Smed_v6_6488_0_1, dd_Smed_v6_6488_0_1, [Score=434, Expect=8e-142]} {RNA1509_14161, RNA1509_44684, RNA1509_55504} {RNA1310_8213, RNA1509_44684, RNA1509_55504} {RNA1509_44684, RNA1509_55504, RNA815_109} |
| 10. | MligTC455_16944 | 44 | 0.91 | Mlig455_007350 | Neo: - Age: logFC(26M/2M)=-0.345 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_007350 {REF} {Length: 3200} {RNA1509_59425} {RNA1310_4864.2} {RNA815_4194.1} | |
| 11. | MligTC455_17308 | 17 | 0.36 | Mlig455_056450 | Neo: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_056450 {REF} {Length: 1306} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15660} {RNA1310_4664.1} {RNA815_21377} | |
| 12. | MligTC455_25867 | 56 | 1.17 | Mlig455_003076 | Neo: - Age: - Region-enriched R5: 2.808/0.04122 |
FBXO4 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_003076 {REF} {Length: 2441} {Pfam: F-box-like [PF12937.9, score=51.0]; F-box domain [PF00646.35, score=37.9]} {Human: ENSG00000151876, FBXO4, F-box protein 4, [RH, Score=124, Expect=2e-31]} {Mouse: ENSMUSG00000022184, Fbxo4, F-box protein 4, [RH, Score=126, Expect=2e-32]} {Smed: dd_Smed_v6_5616_0_1, dd_Smed_v6_5616_0_1, [RH, Score=135, Expect=2e-36]} {RNA1509_39963} {RNA1310_16512} {RNA815_5224} |
| 13. | MligTC455_35111 | 475 | 9.9 | Mlig455_015687, Mlig455_015699 | Neo: Germline Age: - Region-specific R5: 7.042 Region-enriched R5: 5.659/0.00000 |
MARF1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_015687 {REF} {Length: 4398} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=148.3]; MARF1 LOTUS domain [PF19687.1, score=93.6]} {Human: ENSG00000277140, MARF1, meiosis regulator and mRNA stability factor 1, [RH, Score=438, Expect=1e-130]; ENSG00000166783, MARF1, meiosis regulator and mRNA stability factor 1, [RH, Score=438, Expect=1e-130]} {Mouse: ENSMUSG00000060657, Marf1, meiosis regulator and mRNA stability 1, [RH, Score=433, Expect=6e-129]} {Dmel: FBgn0039972, CG17018, [RH, Score=328, Expect=3e-94]} {Smed: dd_Smed_v6_27834_0_1, dd_Smed_v6_27834_0_1, [Score=439, Expect=1e-138]} {RNA1509_9266} {RNA1310_1693.1} {RNA815_14033} Mlig455_015699 {REF} {Length: 4558} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=156.8]; MARF1 LOTUS domain [PF19687.1, score=94.3]} {Human: ENSG00000166783, MARF1, meiosis regulator and mRNA stability factor 1, [RH, Score=445, Expect=7e-133]; ENSG00000277140, MARF1, meiosis regulator and mRNA stability factor 1, [RH, Score=445, Expect=7e-133]} {Mouse: ENSMUSG00000060657, Marf1, meiosis regulator and mRNA stability 1, [RH, Score=444, Expect=2e-132]} {Dmel: FBgn0039972, CG17018, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_27834_0_1, dd_Smed_v6_27834_0_1, [RH, Score=480, Expect=7e-154]} {RNA1509_9266} {RNA1310_1693.1, RNA1509_9266} {RNA1509_9266, RNA815_14033} |
| 14. | MligTC455_27087 | 42 | 0.88 | Mlig455_032740 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_032740 {REF} {Length: 3843} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2} |
Berezikov Lab - 2020-2021 © ERIBA