TomoSeq data search

Data search

Results for MligTC455_27155

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27155

202

4.20

Mlig455_000097

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.315

C5orf22

Mlig455_000097 {REF} {Length: 2652} {TRANSSPLICED} {Pfam: UPF0489 domain [PF12640.9, score=54.3]} {Human: ENSG00000082213, C5orf22, chromosome 5 open reading frame 22, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000022195, 6030458C11Rik, RIKEN cDNA 6030458C11 gene, [Score=50.8, Expect=2e-06]} {RNA1509_35711} {RNA1310_7857, RNA1509_35711} {RNA1509_35711, RNA815_3337.1}

Cumulative graph for MligTC455_27155

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.682	2.743	0.64447	1.00000
RegionR2	0.182	2.743	0.82009	1.00000
RegionR3	-1.249	2.743	0.04093	0.35292
RegionR4	0.439	2.743	0.55275	0.87314
RegionR5	-0.455	2.743	0.37282	0.72611
RegionR6	-0.596	2.743	0.32842	0.91674
RegionR7	0.54	2.743	0.48491	1.00000
RegionR8	0.457	2.743	0.62052	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.743	2.743	0.40599	1.00000
RegenerationR2	-0.052	2.743	0.93621	1.00000
RegenerationR3	1.386	2.743	0.07736	0.46023
RegenerationR4	-0.06	2.743	0.95070	1.00000
RegenerationR5	0.719	2.743	0.25368	0.68658
RegenerationR6	0.27	2.743	0.74248	0.94826
RegenerationBL	0.567	2.743	0.54516	0.90314
RegenerationTP	-1.215	2.743	0.26775	0.71500

Genes with expression patterns similar to MligTC455_27155

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27155	202	4.2	Mlig455_000097	Neo: Int S/G2/M Age: logFC(26M/2M)=0.315	C5orf22	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000097 {REF} {Length: 2652} {TRANSSPLICED} {Pfam: UPF0489 domain [PF12640.9, score=54.3]} {Human: ENSG00000082213, C5orf22, chromosome 5 open reading frame 22, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000022195, 6030458C11Rik, RIKEN cDNA 6030458C11 gene, [Score=50.8, Expect=2e-06]} {RNA1509_35711} {RNA1310_7857, RNA1509_35711} {RNA1509_35711, RNA815_3337.1}
2.	MligTC455_50958	1177	24.52	Mlig455_045565	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=0.284 Region-enriched R4: 1.186/0.01823	TBCB	0.981	-	-	-	-	-	0.981	Mlig455_045565 {REF} {Length: 1258} {Pfam: Ubiquitin-like domain [PF14560.8, score=98.0]; CAP-Gly domain [PF01302.27, score=85.3]} {Human: ENSG00000105254, TBCB, tubulin folding cofactor B, [RH, Score=216, Expect=5e-70]} {Mouse: ENSMUSG00000006095, Tbcb, tubulin folding cofactor B, [RH, Score=216, Expect=4e-70]} {Dmel: FBgn0034451, TBCB, tubulin-binding cofactor B, [RH, Score=168, Expect=2e-51]} {Celegans: WBGene00009987, tbcb-1, Tubulin-specific chaperone B, [RH, Score=201, Expect=1e-64]} {Smed: dd_Smed_v6_3380_0_1, dd_Smed_v6_3380_0_1, [RH, Score=246, Expect=3e-82]} {RNA1509_35268, RNA1509_39279} {RNA1310_31972.2, RNA1509_35268, RNA1509_39279} {RNA1509_35268, RNA1509_39279, RNA815_12848.1}
3.	MligTC455_28479	185	3.86	Mlig455_070498	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.374 Region-enriched R6: 3.121/0.02492	PRKG1	0.961	-	-	-	0.961	-	-	Mlig455_070498 {REF} {Length: 1832} {Pfam: Protein kinase domain [PF00069.27, score=231.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.7]; Kinase-like [PF14531.8, score=24.6]; Cyclic nucleotide-binding domain [PF00027.31, score=21.2]} {Human: ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=556, Expect=0.0]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=556, Expect=0.0]} {Dmel: FBgn0000721, for, foraging, [Score=558, Expect=0.0]} {Celegans: WBGene00001173, egl-4, cGMP-dependent protein kinase egl-4, [Score=505, Expect=4e-177]} {Smed: dd_Smed_v6_7139_0_1, dd_Smed_v6_7139_0_1, [Score=598, Expect=0.0]} {RNA1509_25015} {RNA1310_7906} {RNA815_2348.1}
4.	MligTC455_31597	1057	22.03	Mlig455_051131, Mlig455_051132	Neo: - Age: -	DNM1	0.961	-	-	-	-	-	0.961	Mlig455_051131 {REF} {Length: 4617} {Pfam: Dynamin central region [PF01031.22, score=339.1]; Dynamin family [PF00350.25, score=186.1]; Dynamin GTPase effector domain [PF02212.20, score=82.9]; PH domain [PF00169.31, score=40.0]; 50S ribosome-binding GTPase [PF01926.25, score=19.5]} {Human: ENSG00000106976, DNM1, dynamin 1, [RH, Score=1129, Expect=0.0]; ENSG00000197959, DNM3, dynamin 3, [RH, Score=1099, Expect=0.0]; ENSG00000079805, DNM2, dynamin 2, [RH, Score=1085, Expect=0.0]} {Mouse: ENSMUSG00000026825, Dnm1, dynamin 1, [RH, Score=1126, Expect=0.0]; ENSMUSG00000040265, Dnm3, dynamin 3, [RH, Score=1100, Expect=0.0]; ENSMUSG00000033335, Dnm2, dynamin 2, [RH, Score=1086, Expect=0.0]} {Dmel: FBgn0003392, shi, shibire, [RH, Score=1052, Expect=0.0]} {Celegans: WBGene00001130, dyn-1, Dynamin, [RH, Score=995, Expect=0.0]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [RH, Score=1077, Expect=0.0]} {RNA1509_2804, RNA1509_37430} {RNA1310_1586.1, RNA1509_2804, RNA1509_37430} {RNA1509_2804, RNA1509_37430, RNA815_6662.1} Mlig455_051132 {REF} {Length: 4542} {Pfam: Domain of unknown function (DUF4081) [PF13312.8, score=21.6]} {RNA1509_46947} {RNA1310_33451} {RNA815_26447.1}
5.	MligTC455_41639	740	15.41	Mlig455_049067	Neo: - Age: Down-Down-Up Region-enriched R5: 1.676/0.00031		0.961	-	-	-	-	-	0.961	Mlig455_049067 {REF} {Length: 1380} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=29.4]; Ankyrin repeat [PF00023.32, score=20.3]; Ankyrin repeats (3 copies) [PF12796.9, score=20.2]} {RNA1509_12522} {RNA1310_20494} {RNA815_11245}
6.	MligTC455_20793	578	12.04	Mlig455_070908	Neo: Irradiation Age: - Region-enriched R4: 1.978/0.00030	GLRX2	0.96	-	-	-	-	-	0.960	Mlig455_070908 {REF} {Length: 1282} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=57.7]} {Human: ENSG00000023572, GLRX2, glutaredoxin 2, [RH, Score=93.2, Expect=5e-24]} {Mouse: ENSMUSG00000018196, Glrx2, glutaredoxin 2 (thioltransferase), [RH, Score=98.6, Expect=2e-26]} {Dmel: FBgn0034658, Grx1t, Glutaredoxin 1, testis-specific, [RH, Score=89.7, Expect=1e-23]} {Celegans: WBGene00022663, glrx-21, GLutaRedoXin, [RH, Score=67.4, Expect=6e-15]} {Smed: dd_Smed_v6_2158_0_1, dd_Smed_v6_2158_0_1, [Score=68.9, Expect=7e-16]} {RNA1509_13261, RNA1509_23280, RNA1509_28753, RNA1509_49997} {RNA1310_48649, RNA1509_23280, RNA1509_28753, RNA1509_49997} {RNA1509_23280, RNA1509_28753, RNA1509_49997, RNA815_5181}
7.	MligTC455_36940	103	2.14	Mlig455_052336	Neo: - Age: -		0.96	-	-	0.960	-	-	-	Mlig455_052336 {REF} {Length: 1907} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.0]; RING-type zinc-finger [PF13445.8, score=33.0]; Ring finger domain [PF13639.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.5]; U-box domain [PF04564.17, score=21.1]; zinc-RING finger domain [PF14634.8, score=19.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=18.7]} {RNA1509_20101} {RNA1310_35271} {RNA815_15447.1}
8.	MligTC455_42380	920	19.17	Mlig455_003776	Neo: Irradiation Age: -		0.96	-	-	-	-	-	0.960	Mlig455_003776 {REF} {Length: 1193} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4743) [PF15916.7, score=74.0]; NUDIX domain [PF00293.30, score=43.7]} {Dmel: FBgn0039958, CG12567, [RH, Score=177, Expect=8e-53]} {Smed: dd_Smed_v6_11761_0_1, dd_Smed_v6_11761_0_1, [RH, Score=233, Expect=2e-75]} {RNA1509_22954} {RNA1310_24085} {RNA815_9482}
9.	MligTC455_15658	1665	34.68	Mlig455_040537, Mlig455_062099	Neo: - Age: - Region-enriched R7: 1.225/0.00642	LRRC47	0.952	-	-	-	-	-	0.952	Mlig455_040537 {REF} {Length: 2100} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=68.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=59.9]; B3/4 domain [PF03483.19, score=27.7]; Leucine-rich repeat [PF14580.8, score=24.5]; Leucine Rich Repeat [PF00560.35, score=23.7]; Leucine Rich repeat [PF13516.8, score=21.1]} {Human: ENSG00000130764, LRRC47, leucine rich repeat containing 47, [RH, Score=278, Expect=9e-86]} {Mouse: ENSMUSG00000029028, Lrrc47, leucine rich repeat containing 47, [RH, Score=298, Expect=1e-93]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [Score=101, Expect=3e-22]} {Celegans: WBGene00021828, Y54E10A.6, [RH, Score=215, Expect=3e-63]} {Smed: dd_Smed_v6_1812_0_1, dd_Smed_v6_1812_0_1, [RH, Score=206, Expect=8e-60]} {RNA1509_14115, RNA1509_22855, RNA1509_4249} {RNA1310_12420, RNA1509_14115, RNA1509_22855, RNA1509_4249} {RNA1509_14115, RNA1509_22855, RNA1509_4249, RNA815_4366} Mlig455_062099 {REF} {Length: 2100} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=68.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=59.9]; B3/4 domain [PF03483.19, score=27.7]; Leucine-rich repeat [PF14580.8, score=24.5]; Leucine Rich Repeat [PF00560.35, score=23.7]; Leucine Rich repeat [PF13516.8, score=21.1]} {Human: ENSG00000130764, LRRC47, leucine rich repeat containing 47, [RH, Score=278, Expect=9e-86]} {Mouse: ENSMUSG00000029028, Lrrc47, leucine rich repeat containing 47, [RH, Score=298, Expect=1e-93]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [Score=101, Expect=3e-22]} {Celegans: WBGene00021828, Y54E10A.6, [RH, Score=215, Expect=3e-63]} {Smed: dd_Smed_v6_1812_0_1, dd_Smed_v6_1812_0_1, [RH, Score=206, Expect=8e-60]} {RNA1509_4249} {RNA1310_12420} {RNA815_4366}
10.	MligTC455_18992	131	2.72	Mlig455_009818, Mlig455_010367	Neo: - Age: -	GRIK2	0.952	-	-	0.952	-	-	-	Mlig455_009818 {REF} {Length: 2888} {Pfam: Ligand-gated ion channel [PF00060.28, score=89.7]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=50.1]; Receptor family ligand binding region [PF01094.30, score=19.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=18.3]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=123, Expect=3e-28]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=117, Expect=3e-26]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=117, Expect=3e-26]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=121, Expect=1e-27]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=118, Expect=6e-27]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=118, Expect=6e-27]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=116, Expect=4e-26]} {Dmel: FBgn0038837, CG3822, [Score=129, Expect=1e-30]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=124, Expect=9e-29]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=254, Expect=6e-77]} {RNA1509_14542} {RNA1310_17502} {RNA815_20252} Mlig455_010367 {REF} {Length: 2994} {Pfam: Ligand-gated ion channel [PF00060.28, score=89.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=49.8]; Receptor family ligand binding region [PF01094.30, score=30.6]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=120, Expect=3e-27]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=117, Expect=2e-26]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=117, Expect=4e-26]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=114, Expect=2e-25]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=119, Expect=5e-27]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=118, Expect=1e-26]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=118, Expect=1e-26]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=117, Expect=3e-26]} {Dmel: FBgn0038837, CG3822, [Score=130, Expect=2e-30]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=124, Expect=1e-28]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=254, Expect=2e-76]} {RNA1509_26605} {RNA1310_17502} {RNA815_20252}
11.	MligTC455_31596	845	17.6	Mlig455_051207	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_051207 {REF} {Length: 667} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_2804} {RNA1310_1586.1} {RNA815_6231.1}
12.	MligTC455_42399	391	8.14	Mlig455_059202	Neo: - Age: -	NUDT19	0.951	-	-	-	-	-	0.951	Mlig455_059202 {REF} {Length: 3927} {Pfam: NUDIX domain [PF00293.30, score=22.8]} {Human: ENSG00000213965, NUDT19, nudix hydrolase 19, [RH, Score=149, Expect=7e-41]} {Mouse: ENSMUSG00000034875, Nudt19, nudix (nucleoside diphosphate linked moiety X)-type motif 19, [RH, Score=149, Expect=3e-41]} {Dmel: FBgn0032790, CG10194, [RH, Score=135, Expect=3e-36]} {Celegans: WBGene00003584, ndx-7, Putative nudix hydrolase 7, [RH, Score=77.8, Expect=6e-16]} {Smed: dd_Smed_v6_14640_0_1, dd_Smed_v6_14640_0_1, [RH, Score=131, Expect=5e-35]} {RNA1509_23705, RNA1509_38189, RNA1509_38689} {RNA1310_23441.1, RNA1509_23705, RNA1509_38189, RNA1509_38689} {RNA1509_23705, RNA1509_38189, RNA1509_38689, RNA815_36540}
13.	MligTC455_47044	361	7.53	Mlig455_041546	Neo: - Age: - Region-enriched R5: 1.406/0.01737		0.95	-	-	-	-	-	0.950	Mlig455_041546 {REF} {Length: 500} {TRANSSPLICED} {RNA1509_56604} {RNA1310_60152.1} {RNA815_39626}

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