Data search
Results for MligTC455_27163
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27163 | 931 | 19.41 | Mlig455_017995 | Neo: - |
RNF213 | Mlig455_017995 {REF} {Length: 16423} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=49.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.7]; P-loop containing dynein motor region [PF12775.9, score=30.7]; AAA ATPase domain [PF13191.8, score=20.9]; Sigma-54 interaction domain [PF14532.8, score=20.2]; ABC transporter [PF00005.29, score=19.2]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=412, Expect=5e-114]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=394, Expect=8e-109]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=134, Expect=3e-30]} {Celegans: WBGene00022649, ZK84.1, [Score=61.6, Expect=1e-08]} {RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964} {RNA1310_14.1, RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964} {RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964, RNA815_16.1} |
Cumulative graph for MligTC455_27163
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.197 | 4.578 | 0.20759 | 0.84660 | |
| RegionR2 | 0.886 | 4.578 | 0.02934 | 0.19381 | |
| RegionR3 | 0.576 | 4.578 | 0.05793 | 0.42464 | |
| RegionR4 | -0.327 | 4.578 | 0.40997 | 0.73698 | |
| RegionR5 | -0.06 | 4.578 | 0.83641 | 1.00000 | |
| RegionR6 | -0.153 | 4.578 | 0.64421 | 1.00000 | |
| RegionR7 | -0.318 | 4.578 | 0.45539 | 1.00000 | |
| RegionR8 | 0.593 | 4.578 | 0.18233 | 0.76813 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.346 | 4.578 | 0.85859 | 1.00000 | |
| RegenerationR2 | 0.202 | 4.578 | 0.55107 | 0.89384 | |
| RegenerationR3 | 0.342 | 4.578 | 0.36631 | 0.78112 | |
| RegenerationR4 | 0.589 | 4.578 | 0.14773 | 0.57486 | |
| RegenerationR5 | 0.61 | 4.578 | 0.08866 | 0.45849 | |
| RegenerationR6 | 0.68 | 4.578 | 0.09716 | 0.38764 | |
| RegenerationBL | -0.68 | 4.578 | 0.26052 | 0.61859 | |
| RegenerationTP | 0.548 | 4.578 | 0.24682 | 0.69404 |
Genes with expression patterns similar to MligTC455_27163
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27163 | 931 | 19.41 | Mlig455_017995 | Neo: - |
RNF213 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017995 {REF} {Length: 16423} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=49.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.7]; P-loop containing dynein motor region [PF12775.9, score=30.7]; AAA ATPase domain [PF13191.8, score=20.9]; Sigma-54 interaction domain [PF14532.8, score=20.2]; ABC transporter [PF00005.29, score=19.2]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=412, Expect=5e-114]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=394, Expect=8e-109]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=134, Expect=3e-30]} {Celegans: WBGene00022649, ZK84.1, [Score=61.6, Expect=1e-08]} {RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964} {RNA1310_14.1, RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964} {RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964, RNA815_16.1} |
| 2. | MligTC455_34537 | 855 | 17.82 | Mlig455_051160, Mlig455_069604 | Neo: - |
RNF213 | 3.75 | 0.932 | - | - | 0.943 | 0.910 | 0.965 | Mlig455_051160 {REF} {Length: 998} {Pfam: Integrase zinc binding domain [PF17921.3, score=21.2]} {Smed: dd_Smed_v6_28750_0_1, dd_Smed_v6_28750_0_1, [Score=52.8, Expect=1e-08]} {RNA1509_52470} {RNA1310_21052} {RNA815_52703} Mlig455_069604 {REF} {Length: 16783} {TRANSSPLICED} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=51.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.0]; P-loop containing dynein motor region [PF12775.9, score=30.5]; Sigma-54 interaction domain [PF14532.8, score=20.7]; AAA ATPase domain [PF13191.8, score=20.1]; ABC transporter [PF00005.29, score=19.1]; ATPase domain predominantly from Archaea [PF01637.20, score=18.6]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=416, Expect=4e-115]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=394, Expect=9e-109]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=102, Expect=1e-20]} {RNA1509_1777} {RNA1310_14.1} {RNA815_16.1} |
| 3. | MligTC455_53326 | 2278 | 47.46 | Mlig455_026746, Mlig455_051759 | Neo: - Age: - |
CAMK2G | 1.744 | - | - | 0.977 | - | - | 0.767 | Mlig455_026746 {REF} {Length: 6019} {Pfam: Protein kinase domain [PF00069.27, score=251.6]; Calcium/calmodulin dependent protein kinase II association domain [PF08332.12, score=166.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=122.1]; Domain of unknown function (DUF4440) [PF14534.8, score=30.3]; SnoaL-like domain [PF13474.8, score=28.8]} {Human: ENSG00000148660, CAMK2G, calcium/calmodulin dependent protein kinase II gamma, [RH, Score=731, Expect=0.0]; ENSG00000058404, CAMK2B, calcium/calmodulin dependent protein kinase II beta, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000057897, Camk2b, calcium/calmodulin-dependent protein kinase II, beta, [RH, Score=709, Expect=0.0]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=744, Expect=0.0]} {Celegans: WBGene00006779, unc-43, Calcium/calmodulin-dependent protein kinase type II, [RH, Score=689, Expect=0.0]} {Smed: dd_Smed_v6_7480_0_1, dd_Smed_v6_7480_0_1, [Score=734, Expect=0.0]} {RNA1509_10123} {RNA1310_5114} {RNA815_5979.1} Mlig455_051759 {REF} {Length: 4284} {Pfam: Protein kinase domain [PF00069.27, score=266.0]; Calcium/calmodulin dependent protein kinase II association domain [PF08332.12, score=165.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=129.7]; Domain of unknown function (DUF4440) [PF14534.8, score=30.1]; SnoaL-like domain [PF13474.8, score=28.6]} {Human: ENSG00000148660, CAMK2G, calcium/calmodulin dependent protein kinase II gamma, [RH, Score=729, Expect=0.0]; ENSG00000058404, CAMK2B, calcium/calmodulin dependent protein kinase II beta, [RH, Score=696, Expect=0.0]} {Mouse: ENSMUSG00000057897, Camk2b, calcium/calmodulin-dependent protein kinase II, beta, [RH, Score=705, Expect=0.0]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=740, Expect=0.0]} {Celegans: WBGene00006779, unc-43, Calcium/calmodulin-dependent protein kinase type II, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=712, Expect=0.0]} {RNA1509_10123} {RNA1310_2731.1} {RNA815_5979.1} |
| 4. | MligTC455_42678 | 722 | 15.05 | Mlig455_057034 | Neo: Irradiation Age: - |
SOX2 | 0.971 | - | - | 0.971 | - | - | - | Mlig455_057034 {REF} {Length: 3693} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=62.5]; HMG-box domain [PF09011.12, score=30.9]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=84.0, Expect=4e-18]; ENSG00000125285, SOX21, SRY-box 21, [Score=84.0, Expect=2e-18]; ENSG00000129194, SOX15, SRY-box 15, [Score=82.8, Expect=3e-18]; ENSG00000134595, SOX3, SRY-box 3, [Score=82.0, Expect=4e-17]; ENSG00000168875, SOX14, SRY-box 14, [Score=81.3, Expect=1e-17]; ENSG00000182968, SOX1, SRY-box 1, [Score=80.9, Expect=7e-17]} {Mouse: ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=84.0, Expect=1e-18]; ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=84.0, Expect=2e-18]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=82.0, Expect=4e-18]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=82.0, Expect=3e-17]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=81.3, Expect=5e-17]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=81.3, Expect=9e-18]} {Dmel: FBgn0042630, Sox21b, [Score=89.7, Expect=6e-20]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=86.7, Expect=3e-20]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [Score=85.9, Expect=7e-19]} {RNA1509_10216} {RNA1310_12413, RNA1509_10216} {RNA1509_10216, RNA815_10810.1} |
| 5. | MligTC455_47459 | 866 | 18.03 | Mlig455_020310 | Neo: - Age: - |
RALGPS1 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_020310 {REF} {Length: 4259} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=166.7]} {Human: ENSG00000136828, RALGPS1, Ral GEF with PH domain and SH3 binding motif 1, [RH, Score=278, Expect=2e-83]; ENSG00000116191, RALGPS2, Ral GEF with PH domain and SH3 binding motif 2, [RH, Score=271, Expect=2e-80]} {Mouse: ENSMUSG00000038831, Ralgps1, Ral GEF with PH domain and SH3 binding motif 1, [RH, Score=276, Expect=2e-82]; ENSMUSG00000026594, Ralgps2, Ral GEF with PH domain and SH3 binding motif 2, [RH, Score=271, Expect=7e-82]} {Dmel: FBgn0034158, CG5522, [RH, Score=281, Expect=5e-83]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=74.3, Expect=2e-13]} {Smed: dd_Smed_v6_9244_0_1, dd_Smed_v6_9244_0_1, [RH, Score=218, Expect=5e-59]} {RNA1509_3628} {RNA1310_3714.1} {RNA815_2665} |
| 6. | MligTC455_43415 | 933 | 19.43 | Mlig455_068221 | Neo: - Age: - |
CDS2 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_068221 {REF} {Length: 3101} {Pfam: Cytidylyltransferase family [PF01148.22, score=272.9]} {Human: ENSG00000101290, CDS2, CDP-diacylglycerol synthase 2, [RH, Score=461, Expect=3e-160]; ENSG00000163624, CDS1, CDP-diacylglycerol synthase 1, [RH, Score=446, Expect=8e-154]} {Mouse: ENSMUSG00000058793, Cds2, CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2, [RH, Score=459, Expect=9e-160]; ENSMUSG00000029330, Cds1, CDP-diacylglycerol synthase 1, [RH, Score=447, Expect=2e-154]} {Dmel: FBgn0010350, CdsA, CDP diglyceride synthetase, [RH, Score=483, Expect=7e-169]} {Celegans: WBGene00016384, cdgs-1, Phosphatidate cytidylyltransferase, [RH, Score=439, Expect=6e-152]} {Smed: dd_Smed_v6_4856_0_2, dd_Smed_v6_4856_0_2, [RH, Score=557, Expect=0.0]} {RNA1509_36952} {RNA1310_4672} {RNA815_3501} |
| 7. | MligTC455_37613 | 467 | 9.72 | Mlig455_040517 | Neo: - Age: Up-Down-Down |
0.953 | - | - | - | 0.953 | - | - | Mlig455_040517 {REF} {Length: 737} {NoTransDecoderORF} {RNA1509_51909, RNA1509_52196} {RNA1310_48639.2, RNA1509_51909, RNA1509_52196} {RNA1509_51909, RNA1509_52196, RNA815_32706.2} |
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