M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_53326

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53326 2278 47.46 Mlig455_026746, Mlig455_051759

Neo: -

Age: -

 CAMK2G

Mlig455_026746 {REF} {Length: 6019} {Pfam: Protein kinase domain [PF00069.27, score=251.6]; Calcium/calmodulin dependent protein kinase II association domain [PF08332.12, score=166.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=122.1]; Domain of unknown function (DUF4440) [PF14534.8, score=30.3]; SnoaL-like domain [PF13474.8, score=28.8]} {Human: ENSG00000148660, CAMK2G, calcium/calmodulin dependent protein kinase II gamma, [RH, Score=731, Expect=0.0]; ENSG00000058404, CAMK2B, calcium/calmodulin dependent protein kinase II beta, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000057897, Camk2b, calcium/calmodulin-dependent protein kinase II, beta, [RH, Score=709, Expect=0.0]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=744, Expect=0.0]} {Celegans: WBGene00006779, unc-43, Calcium/calmodulin-dependent protein kinase type II, [RH, Score=689, Expect=0.0]} {Smed: dd_Smed_v6_7480_0_1, dd_Smed_v6_7480_0_1, [Score=734, Expect=0.0]} {RNA1509_10123} {RNA1310_5114} {RNA815_5979.1}

Mlig455_051759 {REF} {Length: 4284} {Pfam: Protein kinase domain [PF00069.27, score=266.0]; Calcium/calmodulin dependent protein kinase II association domain [PF08332.12, score=165.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=129.7]; Domain of unknown function (DUF4440) [PF14534.8, score=30.1]; SnoaL-like domain [PF13474.8, score=28.6]} {Human: ENSG00000148660, CAMK2G, calcium/calmodulin dependent protein kinase II gamma, [RH, Score=729, Expect=0.0]; ENSG00000058404, CAMK2B, calcium/calmodulin dependent protein kinase II beta, [RH, Score=696, Expect=0.0]} {Mouse: ENSMUSG00000057897, Camk2b, calcium/calmodulin-dependent protein kinase II, beta, [RH, Score=705, Expect=0.0]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=740, Expect=0.0]} {Celegans: WBGene00006779, unc-43, Calcium/calmodulin-dependent protein kinase type II, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=712, Expect=0.0]} {RNA1509_10123} {RNA1310_2731.1} {RNA815_5979.1}

Cumulative graph for MligTC455_53326

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.118 5.59 0.86195 1.00000
RegionR2 -0.29 5.59 0.40657 0.80060
RegionR3 -0.275 5.59 0.35768 0.89274
RegionR4 0.08 5.59 0.83047 1.00000
RegionR5 -0.592 5.59 0.05036 0.18842
RegionR6 -0.303 5.59 0.33484 0.92264
RegionR7 0.384 5.59 0.25811 0.88472
RegionR8 1.114 5.59 0.00418 0.11281

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.097 5.59 0.14727 0.88864
RegenerationR2 0.212 5.59 0.53734 0.88697
RegenerationR3 -0.082 5.59 0.82243 0.98839
RegenerationR4 -0.51 5.59 0.18210 0.62271
RegenerationR5 0.089 5.59 0.80768 0.99057
RegenerationR6 -0.245 5.59 0.52366 0.82306
RegenerationBL -0.585 5.59 0.11405 0.39906
RegenerationTP -0.057 5.59 0.87636 1.00000


Genes with expression patterns similar to MligTC455_53326

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53326 2278 47.46 Mlig455_026746, Mlig455_051759

Neo: -

Age: -

 CAMK2G 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_026746 {REF} {Length: 6019} {Pfam: Protein kinase domain [PF00069.27, score=251.6]; Calcium/calmodulin dependent protein kinase II association domain [PF08332.12, score=166.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=122.1]; Domain of unknown function (DUF4440) [PF14534.8, score=30.3]; SnoaL-like domain [PF13474.8, score=28.8]} {Human: ENSG00000148660, CAMK2G, calcium/calmodulin dependent protein kinase II gamma, [RH, Score=731, Expect=0.0]; ENSG00000058404, CAMK2B, calcium/calmodulin dependent protein kinase II beta, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000057897, Camk2b, calcium/calmodulin-dependent protein kinase II, beta, [RH, Score=709, Expect=0.0]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=744, Expect=0.0]} {Celegans: WBGene00006779, unc-43, Calcium/calmodulin-dependent protein kinase type II, [RH, Score=689, Expect=0.0]} {Smed: dd_Smed_v6_7480_0_1, dd_Smed_v6_7480_0_1, [Score=734, Expect=0.0]} {RNA1509_10123} {RNA1310_5114} {RNA815_5979.1}

Mlig455_051759 {REF} {Length: 4284} {Pfam: Protein kinase domain [PF00069.27, score=266.0]; Calcium/calmodulin dependent protein kinase II association domain [PF08332.12, score=165.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=129.7]; Domain of unknown function (DUF4440) [PF14534.8, score=30.1]; SnoaL-like domain [PF13474.8, score=28.6]} {Human: ENSG00000148660, CAMK2G, calcium/calmodulin dependent protein kinase II gamma, [RH, Score=729, Expect=0.0]; ENSG00000058404, CAMK2B, calcium/calmodulin dependent protein kinase II beta, [RH, Score=696, Expect=0.0]} {Mouse: ENSMUSG00000057897, Camk2b, calcium/calmodulin-dependent protein kinase II, beta, [RH, Score=705, Expect=0.0]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=740, Expect=0.0]} {Celegans: WBGene00006779, unc-43, Calcium/calmodulin-dependent protein kinase type II, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=712, Expect=0.0]} {RNA1509_10123} {RNA1310_2731.1} {RNA815_5979.1}
2. MligTC455_42379 521 10.85 Mlig455_027421

Neo: -

Age: Down-Up-Down

 2.625 - - 0.953 0.819 - 0.853 Mlig455_027421 {REF} {Length: 1480} {Smed: dd_Smed_v6_15589_0_1, dd_Smed_v6_15589_0_1, [Score=81.3, Expect=4e-17]} {RNA1509_13870, RNA1509_44294} {RNA1310_12385.1, RNA1509_44294} {RNA1509_44294, RNA815_4422}
3. MligTC455_42657 538 11.2 Mlig455_044393

Neo: -

Age: logFC(26M/2M)=-0.296

Region-enriched R8: 2.252/0.00078

 PDIA4 2.427 - - - 0.757 0.716 0.954 Mlig455_044393 {REF} {Length: 2703} {Pfam: Thioredoxin [PF00085.22, score=65.9]; OST3 / OST6 family, transporter family [PF04756.15, score=27.6]; Glutaredoxin-like domain (DUF836) [PF05768.16, score=26.8]; Thioredoxin-like domain [PF13098.8, score=20.3]} {Human: ENSG00000155660, PDIA4, protein disulfide isomerase family A member 4, [Score=57.8, Expect=2e-08]} {Mouse: ENSMUSG00000025823, Pdia4, protein disulfide isomerase associated 4, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_10655_0_1, dd_Smed_v6_10655_0_1, [RH, Score=144, Expect=2e-38]} {RNA1509_16073} {RNA1310_17300, RNA1509_16073} {RNA1509_16073, RNA815_8288}
4. MligTC455_34325 618 12.87 Mlig455_031158

Neo: -

Age: Up-Down-Down

Region-enriched R2: 1.728/0.02665

 DYNC2H1 2.407 - 0.723 - - 0.954 0.730 Mlig455_031158 {REF} {Length: 13428} {TRANSSPLICED} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=416.4]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=367.3]; ATP-binding dynein motor region [PF12781.9, score=251.0]; P-loop containing dynein motor region D4 [PF12780.9, score=174.0]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=151.3]; Dynein heavy chain C-terminal domain [PF18199.3, score=136.1]; Dynein heavy chain AAA lid domain [PF18198.3, score=127.7]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=127.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=114.9]; Microtubule-binding stalk of dynein motor [PF12777.9, score=87.0]; P-loop containing dynein motor region [PF12775.9, score=85.5]; AAA ATPase domain [PF13191.8, score=37.1]; AAA domain [PF13401.8, score=34.2]; AAA domain [PF13604.8, score=25.8]; ABC transporter [PF00005.29, score=25.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.9]; AAA domain [PF13238.8, score=21.9]; RsgA GTPase [PF03193.18, score=21.7]; AAA domain [PF13479.8, score=21.6]; P-loop containing region of AAA domain [PF13555.8, score=21.6]; Midasin AAA lid domain [PF17867.3, score=20.9]; Rad17 P-loop domain [PF03215.17, score=18.9]; Type II/IV secretion system protein [PF00437.22, score=18.5]} {Human: ENSG00000187240, DYNC2H1, dynein cytoplasmic 2 heavy chain 1, [RH, Score=5051, Expect=0.0]} {Mouse: ENSMUSG00000047193, Dync2h1, dynein cytoplasmic 2 heavy chain 1, [RH, Score=5050, Expect=0.0]} {Dmel: FBgn0023096, btv, beethoven, [RH, Score=2032, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [RH, Score=3126, Expect=0.0]} {Smed: dd_Smed_v6_9136_0_1, dd_Smed_v6_9136_0_1, [RH, Score=5136, Expect=0.0]} {RNA1509_946} {RNA1310_60} {RNA815_24}
5. MligTC455_46717 2695 56.15 Mlig455_065646

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.383

 1.772 - - - - 0.958 0.814 Mlig455_065646 {REF} {Length: 1718} {TRANSSPLICED} {Pfam: Sep15/SelM redox domain [PF08806.13, score=23.4]} {RNA1509_13711, RNA1509_36020, RNA1509_57543, RNA1509_8475} {RNA1310_18197.1, RNA1509_13711, RNA1509_36020, RNA1509_57543, RNA1509_8475} {RNA1509_13711, RNA1509_36020, RNA1509_57543, RNA1509_8475, RNA815_17006}
6. MligTC455_27163 931 19.41 Mlig455_017995

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.717

 RNF213 1.744 - - 0.977 - - 0.767 Mlig455_017995 {REF} {Length: 16423} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=49.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.7]; P-loop containing dynein motor region [PF12775.9, score=30.7]; AAA ATPase domain [PF13191.8, score=20.9]; Sigma-54 interaction domain [PF14532.8, score=20.2]; ABC transporter [PF00005.29, score=19.2]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=412, Expect=5e-114]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=394, Expect=8e-109]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=134, Expect=3e-30]} {Celegans: WBGene00022649, ZK84.1, [Score=61.6, Expect=1e-08]} {RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964} {RNA1310_14.1, RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964} {RNA1509_10308, RNA1509_12810, RNA1509_16763, RNA1509_1777, RNA1509_23093, RNA1509_25681, RNA1509_36321, RNA1509_40378, RNA1509_40412, RNA1509_46326, RNA1509_48126, RNA1509_51280, RNA1509_52373, RNA1509_54386, RNA1509_9964, RNA815_16.1}
7. MligTC455_52467 1114 23.21 Mlig455_064177

Neo: -

Age: logFC(26M/2M)=-0.451

Region-enriched R4: 1.522/0.02787

 C11orf1 1.71 - 0.760 - 0.950 - - Mlig455_064177 {REF} {Length: 1481} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=56.1]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=53.5, Expect=1e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=54.3, Expect=1e-09]} {RNA1509_38176} {RNA1310_51777, RNA1509_38176} {RNA1509_38176, RNA815_26980.1}
8. MligTC455_17044 502 10.46 Mlig455_015598

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.701

 PUF60 1.701 - - - 0.744 - 0.957 Mlig455_015598 {REF} {Length: 4506} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=145.2]; RNA recognition motif [PF16367.7, score=26.9]} {Human: ENSG00000274081, PUF60, poly(U) binding splicing factor 60, [Score=308, Expect=4e-97]; ENSG00000179950, PUF60, poly(U) binding splicing factor 60, [Score=308, Expect=7e-97]} {Mouse: ENSMUSG00000002524, Puf60, poly-U binding splicing factor 60, [Score=310, Expect=2e-97]} {Dmel: FBgn0028577, hfp, half pint, [RH, Score=225, Expect=2e-64]} {Celegans: WBGene00004389, rnp-6, RNP (RRM RNA binding domain) containing, [RH, Score=229, Expect=4e-69]} {Smed: dd_Smed_v6_3853_0_3, dd_Smed_v6_3853_0_3, [Score=350, Expect=6e-114]} {RNA1509_18272, RNA1509_23731} {RNA1310_20367.1, RNA1509_23731} {RNA1509_23731, RNA815_10999}
9. MligTC455_17045 499 10.4 Mlig455_007968

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.880

 1.687 - - - 0.730 - 0.957 Mlig455_007968 {REF} {Length: 1845} {RNA1509_23731, RNA1509_54798} {RNA1310_20367.1, RNA1509_54798} {RNA1509_54798, RNA815_10999}
10. MligTC455_53756 3248 67.67 Mlig455_026858

Neo: -

Age: -

 1.654 - - - 0.700 - 0.954 Mlig455_026858 {REF} {Length: 1830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22665, RNA1509_54839, RNA1509_945} {RNA1310_12502.1, RNA1509_22665, RNA1509_54839} {RNA1509_22665, RNA1509_54839, RNA815_6164.1}
11. MligTC455_32048 356 7.42 Mlig455_004642, Mlig455_008910, Mlig455_008911, Mlig455_008913, Mlig455_018107, Mlig455_026786, Mlig455_042543, Mlig455_046157, Mlig455_055522

Neo: -

Age: -

 0.971 - - - - 0.971 -

Mlig455_004642 {REF} {Length: 641} {RNA1509_20257} {RNA1310_9148.1} {RNA815_5729}

Mlig455_008910 {REF} {Length: 795} {NoTransDecoderORF} {RNA1509_10924} {RNA1310_17734} {RNA815_9399}

Mlig455_008911 {REF} {Length: 291} {NoTransDecoderORF} {RNA1509_26748} {RNA1310_9148.2} {RNA815_5729}

Mlig455_008913 {REF} {Length: 523} {NoTransDecoderORF} {RNA1509_20257} {RNA1310_9148.1} {RNA815_5729}

Mlig455_018107 {REF} {Length: 834} {NoTransDecoderORF} {RNA1509_10924} {RNA1310_17734} {RNA815_9399}

Mlig455_026786 {REF} {Length: 1864} {RNA1509_5808} {RNA1310_9148.1} {RNA815_9399}

Mlig455_042543 {REF} {Length: 8038} {NoTransDecoderORF} {RNA1509_5808} {RNA1310_9148.1} {RNA815_5444.1}

Mlig455_046157 {REF} {Length: 924} {TRANSSPLICED} {RNA1509_10924} {RNA1310_17734} {RNA815_9399}

Mlig455_055522 {REF} {Length: 1898} {RNA1509_20257} {RNA1310_9148.1} {RNA815_17066.1}
12. MligTC455_14975 173 3.61 Mlig455_050558, Mlig455_050588

Neo: -

Age: -

 0.969 - - - - 0.969 -

Mlig455_050558 {REF} {Length: 1652} {RNA1310_120172}

Mlig455_050588 {REF} {Length: 1652} {NoTransDecoderORF} {RNA1310_120172}
13. MligTC455_26666 497 10.35 Mlig455_014576

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.303

 CNBD2 0.966 - - - - 0.966 - Mlig455_014576 {REF} {Length: 3147} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=74.1]} {Human: ENSG00000149646, CNBD2, cyclic nucleotide binding domain containing 2, [RH, Score=97.8, Expect=2e-20]} {Mouse: ENSMUSG00000038085, Cnbd2, cyclic nucleotide binding domain containing 2, [RH, Score=86.3, Expect=3e-17]} {Dmel: FBgn0259243, Pka-R1, Protein kinase, cAMP-dependent, regulatory subunit type 1, [Score=58.2, Expect=9e-09]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=62.0, Expect=5e-10]} {Smed: dd_Smed_v6_15589_0_1, dd_Smed_v6_15589_0_1, [RH, Score=451, Expect=2e-148]} {RNA1509_14495, RNA1509_43806} {RNA1310_6298, RNA1509_43806} {RNA1509_43806, RNA815_2010}
14. MligTC455_28325 467 9.73 Mlig455_022268, Mlig455_036441, Mlig455_037355, Mlig455_062974

Neo: -

Age: -

Region-enriched R8: 2.686/0.01742

 0.964 - - - - 0.964 -

Mlig455_022268 {REF} {Length: 1417} {RNA1509_56606} {RNA1310_15800} {RNA815_31246}

Mlig455_036441 {REF} {Length: 3744} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=30.0]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_037355 {REF} {Length: 1390} {RNA1509_56606} {RNA1310_15800} {RNA815_31246}

Mlig455_062974 {REF} {Length: 2207} {RNA1509_56606} {RNA1310_32667} {RNA815_31246}
15. MligTC455_04662 2358 49.13 Mlig455_056586, Mlig455_056607

Neo: -

Age: -

 ROPN1L 0.962 - - - - 0.962 -

Mlig455_056586 {REF} {Length: 873} {TRANSSPLICED} {Human: ENSG00000145491, ROPN1L, rhophilin associated tail protein 1 like, [RH, Score=207, Expect=5e-67]} {Mouse: ENSMUSG00000022236, Ropn1l, ropporin 1-like, [RH, Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_4888_0_1, dd_Smed_v6_4888_0_1, [RH, Score=278, Expect=9e-96]} {RNA1509_37498} {RNA1310_39913} {RNA815_19368}

Mlig455_056607 {REF} {Length: 872} {TRANSSPLICED} {Human: ENSG00000145491, ROPN1L, rhophilin associated tail protein 1 like, [RH, Score=207, Expect=5e-67]} {Mouse: ENSMUSG00000022236, Ropn1l, ropporin 1-like, [RH, Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_4888_0_1, dd_Smed_v6_4888_0_1, [RH, Score=278, Expect=9e-96]} {RNA1509_37498, RNA1509_42995} {RNA1310_39913, RNA1509_37498, RNA1509_42995} {RNA1509_37498, RNA1509_42995, RNA815_19368}
16. MligTC455_47459 866 18.03 Mlig455_020310

Neo: -

Age: -

 RALGPS1 0.96 - - 0.960 - - - Mlig455_020310 {REF} {Length: 4259} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=166.7]} {Human: ENSG00000136828, RALGPS1, Ral GEF with PH domain and SH3 binding motif 1, [RH, Score=278, Expect=2e-83]; ENSG00000116191, RALGPS2, Ral GEF with PH domain and SH3 binding motif 2, [RH, Score=271, Expect=2e-80]} {Mouse: ENSMUSG00000038831, Ralgps1, Ral GEF with PH domain and SH3 binding motif 1, [RH, Score=276, Expect=2e-82]; ENSMUSG00000026594, Ralgps2, Ral GEF with PH domain and SH3 binding motif 2, [RH, Score=271, Expect=7e-82]} {Dmel: FBgn0034158, CG5522, [RH, Score=281, Expect=5e-83]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=74.3, Expect=2e-13]} {Smed: dd_Smed_v6_9244_0_1, dd_Smed_v6_9244_0_1, [RH, Score=218, Expect=5e-59]} {RNA1509_3628} {RNA1310_3714.1} {RNA815_2665}
17. MligTC455_30309 841 17.51 Mlig455_029677

Neo: -

Age: logFC(26M/2M)=-0.331

 CASP7 0.956 - - 0.956 - - - Mlig455_029677 {REF} {Length: 3720} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13637.8, score=117.0]; Caspase domain [PF00656.24, score=107.2]; Ankyrin repeat [PF00023.32, score=78.6]; Ankyrin repeats (many copies) [PF13857.8, score=77.0]; Ankyrin repeat [PF13606.8, score=70.6]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=24.1]; L27_2 [PF09045.12, score=19.1]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=115, Expect=2e-27]; ENSG00000003400, CASP10, caspase 10, [Score=114, Expect=7e-26]; ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=114, Expect=1e-27]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=80.9, Expect=3e-16]} {Celegans: WBGene00000819, csp-1, Caspase A Caspase A subunit p16 Caspase A subunit p14, [Score=73.9, Expect=3e-14]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=121, Expect=8e-31]} {RNA1509_18682, RNA1509_35845} {RNA1310_39251, RNA1509_18682} {RNA1509_18682, RNA815_2803.1}
18. MligTC455_43031 730 15.2 Mlig455_048533

Neo: -

Age: Down-Up-Down

 ESRRG 0.956 - - 0.956 - - - Mlig455_048533 {REF} {Length: 4806} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=95.0]; Zinc finger, C4 type (two domains) [PF00105.20, score=65.1]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=31.3]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=27.1]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=24.4]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.0]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=114, Expect=3e-26]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=112, Expect=9e-26]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=110, Expect=4e-25]} {Mouse: ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=115, Expect=8e-27]; ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=113, Expect=3e-26]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=104, Expect=3e-23]} {Celegans: WBGene00003628, nhr-35, Nuclear hormone receptor family member nhr-35, [Score=85.9, Expect=3e-17]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=93.6, Expect=1e-19]} {RNA1509_22064} {RNA1310_27500, RNA1509_22064} {RNA1509_22064, RNA815_8823}
19. MligTC455_48123 1826 38.05 Mlig455_039614

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_039614 {REF} {Length: 4721} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=94.4, Expect=1e-24]} {RNA1509_46977} {RNA1310_32988} {RNA815_14341}
20. MligTC455_48124 3676 76.59 Mlig455_051417, Mlig455_051432

Neo: -

Age: Down-Up-Up

 0.951 - - - - 0.951 -

Mlig455_051417 {REF} {Length: 3031} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=95.1, Expect=7e-25]} {RNA1509_46977} {RNA1310_32988} {RNA815_14341}

Mlig455_051432 {REF} {Length: 2527} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=95.1, Expect=7e-25]} {RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629} {RNA1310_32988, RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629} {RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629, RNA815_14341}
21. MligTC455_26352 227 4.72 Mlig455_051215

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_051215 {REF} {Length: 1112} {RNA1509_40810} {RNA1310_37375} {RNA815_16686.1}
22. MligTC455_38783 483 10.05 Mlig455_059309

Neo: -

Age: Down-Down-Up

 0.95 - - - - - 0.950 Mlig455_059309 {REF} {Length: 3062} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=32.1]} {RNA1509_26338, RNA1509_32392, RNA1509_38600} {RNA1310_28930.1, RNA1509_26338, RNA1509_32392} {RNA1509_26338, RNA1509_32392, RNA815_13689}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA