Data search
Results for MligTC455_27176
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27176 | 239 | 4.99 | Mlig455_063766 | Neo: Irradiation Age: - |
C5orf22 | Mlig455_063766 {REF} {Length: 2615} {TRANSSPLICED} {Pfam: UPF0489 domain [PF12640.9, score=54.3]} {Human: ENSG00000082213, C5orf22, chromosome 5 open reading frame 22, [Score=50.1, Expect=7e-06]} {Mouse: ENSMUSG00000022195, 6030458C11Rik, RIKEN cDNA 6030458C11 gene, [Score=51.2, Expect=2e-06]} {RNA1509_35711} {RNA1310_7857} {RNA815_3337.1} |
Cumulative graph for MligTC455_27176
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.437 | 3.008 | 0.31698 | 0.96643 | |
| RegionR2 | 0.758 | 3.008 | 0.36771 | 0.76219 | |
| RegionR3 | 0.166 | 3.008 | 0.69457 | 1.00000 | |
| RegionR4 | 1.816 | 3.008 | 0.01445 | 0.08026 | |
| RegionR5 | 1.104 | 3.008 | 0.07648 | 0.25364 | |
| RegionR6 | 0.57 | 3.008 | 0.42568 | 0.99160 | |
| RegionR7 | 0.576 | 3.008 | 0.49271 | 1.00000 | |
| RegionR8 | -6.426 | 3.008 | 0.01052 | 0.19422 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.7 | 3.008 | 0.40124 | 1.00000 | |
| RegenerationR2 | 1.324 | 3.008 | 0.01629 | 0.20987 | |
| RegenerationR3 | 1.8 | 3.008 | 0.00332 | 0.10263 | |
| RegenerationR4 | -0.076 | 3.008 | 0.91876 | 1.00000 | |
| RegenerationR5 | 0.375 | 3.008 | 0.45101 | 0.83106 | |
| RegenerationR6 | 1 | 3.008 | 0.12502 | 0.43440 | |
| RegenerationBL | 2.561 | 3.008 | 0.09617 | 0.36374 | |
| RegenerationTP | 4.263 | 3.008 | 0.00392 | 0.10462 |
Genes with expression patterns similar to MligTC455_27176
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27176 | 239 | 4.99 | Mlig455_063766 | Neo: Irradiation Age: - |
C5orf22 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063766 {REF} {Length: 2615} {TRANSSPLICED} {Pfam: UPF0489 domain [PF12640.9, score=54.3]} {Human: ENSG00000082213, C5orf22, chromosome 5 open reading frame 22, [Score=50.1, Expect=7e-06]} {Mouse: ENSMUSG00000022195, 6030458C11Rik, RIKEN cDNA 6030458C11 gene, [Score=51.2, Expect=2e-06]} {RNA1509_35711} {RNA1310_7857} {RNA815_3337.1} |
| 2. | MligTC455_33018 | 540 | 11.25 | Mlig455_065016 | Neo: Int S/G2/M Age: - |
SLX4 | 1.673 | 0.960 | - | - | 0.713 | - | - | Mlig455_065016 {REF} {Length: 3818} {TRANSSPLICED} {Human: ENSG00000188827, SLX4, SLX4 structure-specific endonuclease subunit, [RH, Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000039738, Slx4, SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae), [Score=50.1, Expect=1e-05]} {RNA1509_23641, RNA1509_23757} {RNA1310_6766, RNA1509_23641, RNA1509_23757} {RNA1509_23641, RNA1509_23757, RNA815_4724} |
| 3. | MligTC455_44418 | 128 | 2.66 | Mlig455_053502 | Neo: - Age: logFC(26M/2M)=-0.629 |
PRDM1 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_053502 {REF} {Length: 3320} {Pfam: Zinc-finger double domain [PF13465.8, score=94.1]; Zinc finger, C2H2 type [PF00096.28, score=41.9]; C2H2-type zinc finger [PF13894.8, score=33.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; Zinc-finger of C2H2 type [PF12874.9, score=20.2]} {Human: ENSG00000057657, PRDM1, PR/SET domain 1, [Score=234, Expect=2e-68]} {Mouse: ENSMUSG00000038151, Prdm1, PR domain containing 1, with ZNF domain, [Score=238, Expect=6e-69]} {Dmel: FBgn0035625, Blimp-1, [Score=245, Expect=2e-70]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=228, Expect=6e-66]} {Smed: dd_Smed_v6_19859_0_1, dd_Smed_v6_19859_0_1, [Score=230, Expect=6e-70]} {RNA1509_42458} {RNA1310_13246.1} {RNA815_15176.1} |
| 4. | MligTC455_17690 | 241 | 5.03 | Mlig455_039431, Mlig455_070680 | Neo: - Age: Down-Up-Down |
0.96 | - | - | - | - | - | 0.960 | Mlig455_039431 {REF} {Length: 2089} {TRANSSPLICED} {RNA1310_17354.1} {RNA815_37975} Mlig455_070680 {REF} {Length: 2110} {TRANSSPLICED} {RNA1509_8195} {RNA1310_17354.1} {RNA815_37975} |
|
| 5. | MligTC455_20748 | 378 | 7.87 | Mlig455_061316 | Neo: Int S/G2/M Age: Up-Up-Down |
0.955 | 0.955 | - | - | - | - | - | Mlig455_061316 {REF} {Length: 3111} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=19.7]} {RNA1509_8660} {RNA1310_14747} {RNA815_10812.2} | |
| 6. | MligTC455_42434 | 267 | 5.57 | Mlig455_042541 | Neo: - Age: Up-Down-Up |
TESK1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_042541 {REF} {Length: 3477} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=150.8]; Protein kinase domain [PF00069.27, score=126.5]; Phosphotransferase enzyme family [PF01636.25, score=23.5]; Fungal protein kinase [PF17667.3, score=21.9]} {Human: ENSG00000107140, TESK1, testis associated actin remodelling kinase 1, [RH, Score=268, Expect=6e-82]; ENSG00000070759, TESK2, testis associated actin remodelling kinase 2, [RH, Score=256, Expect=8e-78]} {Mouse: ENSMUSG00000028458, Tesk1, testis specific protein kinase 1, [RH, Score=268, Expect=6e-82]; ENSMUSG00000033985, Tesk2, testis-specific kinase 2, [RH, Score=259, Expect=4e-79]} {Dmel: FBgn0004876, cdi, center divider, [RH, Score=250, Expect=2e-72]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=103, Expect=4e-23]} {Smed: dd_Smed_v6_4373_0_1, dd_Smed_v6_4373_0_1, [RH, Score=168, Expect=2e-46]} {RNA1509_27096, RNA1509_29631, RNA1509_47905, RNA1509_57831} {RNA1310_18795, RNA1509_27096, RNA1509_29631, RNA1509_47905, RNA1509_57831} {RNA1509_27096, RNA1509_29631, RNA1509_47905, RNA1509_57831, RNA815_12247.1} |
| 7. | MligTC455_27342 | 251 | 5.23 | Mlig455_044588 | Neo: - Age: - Region-enriched R2: 3.466/0.00055 |
PRDM9 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_044588 {REF} {Length: 3936} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=43.8]; Zinc finger, C2H2 type [PF00096.28, score=31.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=26.6]; C2H2-type zinc finger [PF13912.8, score=26.3]; Zinc-finger of C2H2 type [PF12874.9, score=24.5]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.2]} {Human: ENSG00000164256, PRDM9, PR/SET domain 9, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=54.3, Expect=2e-07]} {Dmel: FBgn0029697, CG15570, [Score=61.2, Expect=1e-09]} {RNA1509_50208} {RNA1310_27790.1} {RNA815_25328} |
| 8. | MligTC455_42433 | 296 | 6.16 | Mlig455_042531 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_042531 {REF} {Length: 2044} {NoTransDecoderORF} {RNA1509_29193} {RNA1310_29561} {RNA815_12247.1} |
Berezikov Lab - 2020-2021 © ERIBA