TomoSeq data search

Data search

Results for MligTC455_27228

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27228

11798

245.79

Mlig455_012915

Neo: -

Age: -

Mlig455_012915 {REF} {Length: 1695} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=79.4]} {Dmel: FBgn0000308, chic, chickadee, [RH, Score=69.7, Expect=9e-16]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [RH, Score=52.0, Expect=3e-09]} {RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132} {RNA1310_18604.2, RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132} {RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132, RNA815_6779}

Cumulative graph for MligTC455_27228

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.524	8.029	0.19981	0.83628
RegionR2	-0.404	8.029	0.16612	0.51026
RegionR3	0.386	8.029	0.11472	0.58863
RegionR4	0.612	8.029	0.02794	0.12918
RegionR5	0.201	8.029	0.41066	0.76970
RegionR6	0.454	8.029	0.06371	0.47315
RegionR7	-0.407	8.029	0.12935	0.67656
RegionR8	-0.317	8.029	0.27205	0.89507

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.688	8.029	0.19367	0.93161
RegenerationR2	-0.156	8.029	0.62792	0.92632
RegenerationR3	-0.375	8.029	0.25134	0.68565
RegenerationR4	-0.331	8.029	0.32224	0.76039
RegenerationR5	0.224	8.029	0.49098	0.85363
RegenerationR6	-0.27	8.029	0.40137	0.73837
RegenerationBL	0.129	8.029	0.64752	0.98497
RegenerationTP	0.203	8.029	0.51066	0.90760

Genes with expression patterns similar to MligTC455_27228

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27228	11798	245.79	Mlig455_012915	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012915 {REF} {Length: 1695} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=79.4]} {Dmel: FBgn0000308, chic, chickadee, [RH, Score=69.7, Expect=9e-16]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [RH, Score=52.0, Expect=3e-09]} {RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132} {RNA1310_18604.2, RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132} {RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132, RNA815_6779}
2.	MligTC455_50703	6430	133.96	Mlig455_053984	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.160	RHOA	0.97	-	-	-	0.970	-	-	Mlig455_053984 {REF} {Length: 1835} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=192.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.7]; ADP-ribosylation factor family [PF00025.23, score=37.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.3]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=346, Expect=6e-123]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=346, Expect=5e-123]; ENSG00000143878, RHOB, ras homolog family member B, [RH, Score=329, Expect=3e-116]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=346, Expect=4e-123]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=346, Expect=4e-123]; ENSMUSG00000054364, Rhob, ras homolog family member B, [RH, Score=329, Expect=2e-116]} {Dmel: FBgn0014020, Rho1, [RH, Score=338, Expect=4e-120]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=331, Expect=2e-117]} {Smed: dd_Smed_v6_578_0_1, dd_Smed_v6_578_0_1, [RH, Score=318, Expect=2e-112]} {RNA1509_16662, RNA1509_24432, RNA1509_25397, RNA1509_31841, RNA1509_51478, RNA1509_654} {RNA1310_12715, RNA1509_16662, RNA1509_24432, RNA1509_25397, RNA1509_31841, RNA1509_51478, RNA1509_654} {RNA1509_16662, RNA1509_24432, RNA1509_25397, RNA1509_31841, RNA1509_51478, RNA1509_654, RNA815_4833.1}
3.	MligTC455_50540	5116	106.59	Mlig455_068057	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.343		0.965	-	-	-	0.965	-	-	Mlig455_068057 {REF} {Length: 521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5564) [PF17719.3, score=35.5]} {Mouse: ENSMUSG00000071653, 1810009A15Rik, RIKEN cDNA 1810009A15 gene, [Score=42.7, Expect=7e-06]} {RNA1509_23900, RNA1509_3995} {RNA1310_64510.1, RNA1509_23900, RNA1509_3995} {RNA1509_23900, RNA1509_3995, RNA815_30472}
4.	MligTC455_46318	777	16.19	Mlig455_023122	Neo: - Age: -	CC2D1A	0.958	-	-	-	0.958	-	-	Mlig455_023122 {REF} {Length: 3177} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=21.6]; First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=20.8]} {Human: ENSG00000132024, CC2D1A, coiled-coil and C2 domain containing 1A, [RH, Score=270, Expect=2e-76]} {Mouse: ENSMUSG00000036686, Cc2d1a, coiled-coil and C2 domain containing 1A, [RH, Score=277, Expect=3e-79]} {Dmel: FBgn0261983, l(2)gd1, lethal (2) giant discs 1, [RH, Score=316, Expect=2e-94]} {Celegans: WBGene00012578, Y37H9A.3, Coiled-coil and C2 domain-containing protein 1-like, [RH, Score=191, Expect=2e-50]} {Smed: dd_Smed_v6_4807_0_1, dd_Smed_v6_4807_0_1, [RH, Score=367, Expect=6e-113]} {RNA1509_5831} {RNA1310_4112} {RNA815_4032}
5.	MligTC455_45747	2366	49.3	Mlig455_017780	Neo: - Age: - Region-enriched R4: 1.872/0.00000	NDUFA5	0.956	-	-	-	0.956	-	-	Mlig455_017780 {REF} {Length: 663} {TRANSSPLICED} {Pfam: ETC complex I subunit conserved region [PF04716.16, score=91.0]} {Human: ENSG00000128609, NDUFA5, NADH:ubiquinone oxidoreductase subunit A5, [RH, Score=123, Expect=3e-37]} {Mouse: ENSMUSG00000023089, Ndufa5, NADH:ubiquinone oxidoreductase subunit A5, [RH, Score=131, Expect=1e-40]} {Dmel: FBgn0047038, ND-13B, NADH dehydrogenase (ubiquinone) 13 kDa B subunit, [RH, Score=131, Expect=2e-40]} {Celegans: WBGene00007880, C33A12.1, Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, [RH, Score=130, Expect=6e-40]} {Smed: dd_Smed_v6_1878_0_1, dd_Smed_v6_1878_0_1, [RH, Score=151, Expect=6e-49]} {RNA1509_10094, RNA1509_40064} {RNA1310_52774.2, RNA1509_10094, RNA1509_40064} {RNA1509_10094, RNA1509_40064, RNA815_24146.1}

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