TomoSeq data search

Data search

Results for MligTC455_27281

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27281	52	1.08	Mlig455_060834	Neo: - Age: Down-Up-Down	CASP6	Mlig455_060834 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=79.9]; Caspase domain [PF00656.24, score=65.3]; SH3 domain [PF00018.30, score=49.0]; Variant SH3 domain [PF14604.8, score=42.1]; Variant SH3 domain [PF07653.19, score=35.2]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeats (many copies) [PF13637.8, score=31.0]; Ankyrin repeat [PF13606.8, score=30.2]; Ankyrin repeats (many copies) [PF13857.8, score=24.9]} {Human: ENSG00000138794, CASP6, caspase 6, [Score=80.9, Expect=3e-16]; ENSG00000164305, CASP3, caspase 3, [Score=80.5, Expect=4e-16]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=80.9, Expect=2e-16]; ENSMUSG00000027997, Casp6, caspase 6, [Score=79.7, Expect=4e-16]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00005078, src-2, Tyrosine protein-kinase src-2, [Score=74.3, Expect=7e-14]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=101, Expect=1e-22]} {RNA1509_40801} {RNA1310_6167} {RNA815_66.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27281

1.08

Mlig455_060834

Neo: -

Age: Down-Up-Down

CASP6

Mlig455_060834 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=79.9]; Caspase domain [PF00656.24, score=65.3]; SH3 domain [PF00018.30, score=49.0]; Variant SH3 domain [PF14604.8, score=42.1]; Variant SH3 domain [PF07653.19, score=35.2]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeats (many copies) [PF13637.8, score=31.0]; Ankyrin repeat [PF13606.8, score=30.2]; Ankyrin repeats (many copies) [PF13857.8, score=24.9]} {Human: ENSG00000138794, CASP6, caspase 6, [Score=80.9, Expect=3e-16]; ENSG00000164305, CASP3, caspase 3, [Score=80.5, Expect=4e-16]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=80.9, Expect=2e-16]; ENSMUSG00000027997, Casp6, caspase 6, [Score=79.7, Expect=4e-16]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00005078, src-2, Tyrosine protein-kinase src-2, [Score=74.3, Expect=7e-14]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=101, Expect=1e-22]} {RNA1509_40801} {RNA1310_6167} {RNA815_66.1}

Cumulative graph for MligTC455_27281

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.835	1.362	0.99975	1.00000
RegionR2	-0.909	1.362	0.95860	1.00000
RegionR3	1.344	1.362	0.22542	0.76721
RegionR4	0.643	1.362	0.55274	0.87314
RegionR5	0.167	1.362	0.67372	1.00000
RegionR6	1.776	1.362	0.12495	0.64318
RegionR7	-2.718	1.362	0.99976	1.00000
RegionR8	2.531	1.362	0.17021	0.74392

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.191	1.362	0.13212	0.86549
RegenerationR2	1.514	1.362	0.33236	0.76897
RegenerationR3	2.467	1.362	0.01900	0.25257
RegenerationR4	1.143	1.362	0.32465	0.76192
RegenerationR5	1.824	1.362	0.06639	0.40588
RegenerationR6	1.109	1.362	0.28839	0.63853
RegenerationBL	-2.048	1.362	0.99981	1.00000
RegenerationTP	1.305	1.362	0.49599	0.89803

Genes with expression patterns similar to MligTC455_27281

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27281	52	1.08	Mlig455_060834	Neo: - Age: Down-Up-Down	CASP6	3	-	-	-	1.000	1.000	1.000	Mlig455_060834 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=79.9]; Caspase domain [PF00656.24, score=65.3]; SH3 domain [PF00018.30, score=49.0]; Variant SH3 domain [PF14604.8, score=42.1]; Variant SH3 domain [PF07653.19, score=35.2]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeats (many copies) [PF13637.8, score=31.0]; Ankyrin repeat [PF13606.8, score=30.2]; Ankyrin repeats (many copies) [PF13857.8, score=24.9]} {Human: ENSG00000138794, CASP6, caspase 6, [Score=80.9, Expect=3e-16]; ENSG00000164305, CASP3, caspase 3, [Score=80.5, Expect=4e-16]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=80.9, Expect=2e-16]; ENSMUSG00000027997, Casp6, caspase 6, [Score=79.7, Expect=4e-16]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00005078, src-2, Tyrosine protein-kinase src-2, [Score=74.3, Expect=7e-14]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=101, Expect=1e-22]} {RNA1509_40801} {RNA1310_6167} {RNA815_66.1}
2.	MligTC455_56966	130	2.71	Mlig455_033002	Neo: - Age: - Region-enriched R3: 3.605/0.00022 Region-enriched R4: 3.360/0.01021		1.69	-	-	-	-	0.951	0.739	Mlig455_033002 {REF} {Length: 78} {NoTransDecoderORF} {RNA1509_7667} {RNA1310_50600} {RNA815_52664}
3.	MligTC455_01411	17	0.36	Mlig455_008020	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_008020 {REF} {Length: 199} {NoTransDecoderORF}
4.	MligTC455_18830	278	5.79	Mlig455_059851	Neo: - Age: logFC(26M/2M)=0.667 Region-enriched R3: 2.687/0.00833 Region-enriched R5: 2.230/0.02285		0.958	-	-	-	-	-	0.958	Mlig455_059851 {REF} {Length: 795} {RNA1509_44298} {RNA1310_45814, RNA1509_44298} {RNA1509_44298, RNA815_36105}
5.	MligTC455_48854	40	0.84	Mlig455_013153	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_013153 {REF} {Length: 1966} {RNA1310_80422} {RNA815_52233}
6.	MligTC455_20697	51	1.06	Mlig455_032266	Neo: - Age: -	SLC24A5	0.952	-	-	-	-	-	0.952	Mlig455_032266 {REF} {Length: 1815} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=157.9]} {Human: ENSG00000188467, SLC24A5, solute carrier family 24 member 5, [RH, Score=354, Expect=2e-116]} {Mouse: ENSMUSG00000041771, Slc24a4, solute carrier family 24 (sodium/potassium/calcium exchanger), member 4, [Score=365, Expect=2e-119]; ENSMUSG00000035183, Slc24a5, solute carrier family 24, member 5, [Score=353, Expect=2e-116]} {Dmel: FBgn0265767, zyd, zydeco, [Score=330, Expect=1e-107]} {Celegans: WBGene00003569, ncx-4, Na/Ca eXchangers, [Score=276, Expect=2e-85]} {Smed: dd_Smed_v6_7121_0_1, dd_Smed_v6_7121_0_1, [RH, Score=447, Expect=3e-153]} {RNA1310_20949.1} {RNA815_11416}