Data search
Results for MligTC455_18830
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18830 | 278 | 5.79 | Mlig455_059851 | Neo: - Age: logFC(26M/2M)=0.667 Region-enriched R3: 2.687/0.00833 |
Mlig455_059851 {REF} {Length: 795} {RNA1509_44298} {RNA1310_45814, RNA1509_44298} {RNA1509_44298, RNA815_36105} |
Cumulative graph for MligTC455_18830
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.211 | 3.186 | 0.04908 | 0.52668 | |
| RegionR2 | -0.879 | 3.186 | 0.98236 | 1.00000 | |
| RegionR3 | 2.687 | 3.186 | 0.00020 | 0.00833 | |
| RegionR4 | 2.083 | 3.186 | 0.02933 | 0.13372 | |
| RegionR5 | 2.23 | 3.186 | 0.00288 | 0.02285 | |
| RegionR6 | 2.274 | 3.186 | 0.00407 | 0.09620 | |
| RegionR7 | -0.518 | 3.186 | 0.95765 | 1.00000 | |
| RegionR8 | -0.666 | 3.186 | 0.97061 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.426 | 3.186 | 0.99998 | 1.00000 | |
| RegenerationR2 | -1.031 | 3.186 | 0.19164 | 0.63532 | |
| RegenerationR3 | -0.689 | 3.186 | 0.32340 | 0.75128 | |
| RegenerationR4 | -0.311 | 3.186 | 0.69080 | 0.94969 | |
| RegenerationR5 | -1.068 | 3.186 | 0.12434 | 0.52705 | |
| RegenerationR6 | -1.582 | 3.186 | 0.02670 | 0.20445 | |
| RegenerationBL | -1.892 | 3.186 | 0.08936 | 0.35019 | |
| RegenerationTP | -1.039 | 3.186 | 0.38789 | 0.82135 |
Genes with expression patterns similar to MligTC455_18830
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18830 | 278 | 5.79 | Mlig455_059851 | Neo: - Age: logFC(26M/2M)=0.667 Region-enriched R3: 2.687/0.00833 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059851 {REF} {Length: 795} {RNA1509_44298} {RNA1310_45814, RNA1509_44298} {RNA1509_44298, RNA815_36105} | |
| 2. | MligTC455_52856 | 135 | 2.82 | Mlig455_040428 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.836 Region-enriched R3: 4.616/0.00003 |
MCFD2 | 3.29 | 0.767 | - | - | 0.831 | 0.950 | 0.742 | Mlig455_040428 {REF} {Length: 998} {Pfam: EF-hand domain pair [PF13499.8, score=45.6]; EF-hand domain [PF13405.8, score=36.2]; EF hand [PF00036.34, score=36.1]; EF-hand domain pair [PF13833.8, score=25.7]} {Human: ENSG00000180398, MCFD2, multiple coagulation factor deficiency 2, [Score=62.0, Expect=5e-12]} {Mouse: ENSMUSG00000024150, Mcfd2, multiple coagulation factor deficiency 2, [Score=60.1, Expect=2e-11]} {Dmel: FBgn0037798, CG12817, [RH, Score=53.5, Expect=6e-09]} {Celegans: WBGene00010075, F55A11.1, [RH, Score=70.1, Expect=3e-15]} {RNA1509_28625} {RNA1310_37099} {RNA815_18915} |
| 3. | MligTC455_19700 | 179 | 3.74 | Mlig455_039813 | Neo: - Age: - |
GHDC | 2.675 | 0.804 | - | - | 0.976 | - | 0.895 | Mlig455_039813 {REF} {Length: 2554} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=339.6]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [RH, Score=81.3, Expect=2e-15]} {RNA1509_33021, RNA1509_43178, RNA1509_54770} {RNA1310_1835.2, RNA1509_33021, RNA1509_43178, RNA1509_54770} {RNA1509_33021, RNA1509_43178, RNA1509_54770, RNA815_4021} |
| 4. | MligTC455_43739 | 24 | 0.51 | Mlig455_032866 | Neo: - Age: - Region-enriched R5: 3.926/0.02028 |
1.723 | - | - | - | 0.968 | - | 0.755 | Mlig455_032866 {REF} {Length: 80} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_23248} {RNA815_20321} | |
| 5. | MligTC455_11594 | 299 | 6.22 | Mlig455_021082 | Neo: - Age: logFC(26M/2M)=1.375 Region-enriched R3: 2.441/0.00014 |
PLB1 | 1.722 | - | - | - | 0.958 | - | 0.764 | Mlig455_021082 {REF} {Length: 2319} {Pfam: GDSL-like Lipase/Acylhydrolase [PF00657.24, score=75.0]; GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=40.2]} {Human: ENSG00000163803, PLB1, phospholipase B1, [Score=281, Expect=9e-84]} {Mouse: ENSMUSG00000029134, Plb1, phospholipase B1, [Score=284, Expect=7e-88]} {Dmel: FBgn0036939, CG7365, [Score=204, Expect=4e-61]} {Celegans: WBGene00012201, W02B12.1, [RH, Score=229, Expect=5e-71]} {Smed: dd_Smed_v6_2690_0_1, dd_Smed_v6_2690_0_1, [RH, Score=288, Expect=1e-93]} {RNA1509_8986} {RNA1310_10650} {RNA815_3617} |
| 6. | MligTC455_22034 | 231 | 4.82 | Mlig455_045938 | Neo: Irradiation Age: - |
LARP1B | 0.976 | - | - | - | 0.976 | - | - | Mlig455_045938 {REF} {Length: 6716} {TRANSSPLICED} {Pfam: La domain [PF05383.19, score=63.1]} {Human: ENSG00000138709, LARP1B, La ribonucleoprotein domain family member 1B, [Score=285, Expect=3e-81]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=328, Expect=2e-95]} {Dmel: FBgn0261618, larp, La related protein, [Score=234, Expect=1e-63]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=175, Expect=2e-44]} {Smed: dd_Smed_v6_1885_0_1, dd_Smed_v6_1885_0_1, [RH, Score=218, Expect=2e-58]} {RNA1509_10711, RNA1509_13373, RNA1509_27458, RNA1509_43387, RNA1509_53542, RNA1509_57067} {RNA1310_10199.1, RNA1509_13373, RNA1509_27458, RNA1509_43387, RNA1509_53542, RNA1509_57067} {RNA1509_13373, RNA1509_27458, RNA1509_43387, RNA1509_53542, RNA1509_57067, RNA815_7521.1} |
| 7. | MligTC455_27952 | 90 | 1.87 | Mlig455_051112 | Neo: - Age: - |
SLC17A5 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_051112 {REF} {Length: 3048} {Pfam: Major Facilitator Superfamily [PF07690.18, score=148.0]; Sugar (and other) transporter [PF00083.26, score=23.7]} {Human: ENSG00000119899, SLC17A5, solute carrier family 17 member 5, [Score=321, Expect=1e-104]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=306, Expect=5e-99]; ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [Score=305, Expect=3e-97]} {Mouse: ENSMUSG00000049624, Slc17a5, solute carrier family 17 (anion/sugar transporter), member 5, [Score=306, Expect=7e-99]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=305, Expect=9e-98]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=304, Expect=3e-97]; ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [Score=295, Expect=2e-93]} {Dmel: FBgn0030452, MFS10, Major Facilitator Superfamily Transporter 10, [Score=321, Expect=4e-104]} {Celegans: WBGene00008000, slc-17.2, Uncharacterized transporter slc-17.2, [Score=261, Expect=4e-82]} {Smed: dd_Smed_v6_1874_0_1, dd_Smed_v6_1874_0_1, [Score=303, Expect=3e-98]} {RNA1509_20478} {RNA1310_14525} {RNA815_29510} |
| 8. | MligTC455_07446 | 46 | 0.97 | Mlig455_067249 | Neo: - |
SIDT1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_067249 {REF} {Length: 2655} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=266.7]} {Human: ENSG00000072858, SIDT1, SID1 transmembrane family member 1, [Score=187, Expect=4e-49]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=182, Expect=2e-47]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [Score=168, Expect=3e-43]} {Smed: dd_Smed_v6_8407_0_1, dd_Smed_v6_8407_0_1, [Score=202, Expect=5e-55]} {RNA1509_53508} {RNA1310_32542} {RNA815_35719} |
| 9. | MligTC455_43392 | 90 | 1.88 | Mlig455_055609 | Neo: - Age: - Region-enriched R4: 3.592/0.03736 |
0.963 | - | - | - | 0.963 | - | - | Mlig455_055609 {REF} {Length: 3000} {TRANSSPLICED} {Mouse: ENSMUSG00000002343, Armc6, armadillo repeat containing 6, [RH, Score=120, Expect=3e-29]} {Dmel: FBgn0034315, CG5721, [RH, Score=113, Expect=7e-27]} {Smed: dd_Smed_v6_1357_0_1, dd_Smed_v6_1357_0_1, [RH, Score=147, Expect=8e-39]} {RNA1509_31191} {RNA1310_17098.1} {RNA815_7466} | |
| 10. | MligTC455_03891 | 123 | 2.56 | Mlig455_050023 | Neo: - Age: - |
IMMP2L | 0.962 | - | - | - | 0.962 | - | - | Mlig455_050023 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: Signal peptidase, peptidase S26 [PF10502.11, score=30.2]} {Human: ENSG00000184903, IMMP2L, inner mitochondrial membrane peptidase subunit 2, [RH, Score=53.9, Expect=4e-08]} {Dmel: FBgn0034535, CG11110, [RH, Score=53.5, Expect=3e-08]} {RNA1509_29174} {RNA1310_34623} {RNA815_15967} |
| 11. | MligTC455_27281 | 52 | 1.08 | Mlig455_060834 | Neo: - Age: Down-Up-Down |
CASP6 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_060834 {REF} {Length: 2985} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=79.9]; Caspase domain [PF00656.24, score=65.3]; SH3 domain [PF00018.30, score=49.0]; Variant SH3 domain [PF14604.8, score=42.1]; Variant SH3 domain [PF07653.19, score=35.2]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeats (many copies) [PF13637.8, score=31.0]; Ankyrin repeat [PF13606.8, score=30.2]; Ankyrin repeats (many copies) [PF13857.8, score=24.9]} {Human: ENSG00000138794, CASP6, caspase 6, [Score=80.9, Expect=3e-16]; ENSG00000164305, CASP3, caspase 3, [Score=80.5, Expect=4e-16]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=80.9, Expect=2e-16]; ENSMUSG00000027997, Casp6, caspase 6, [Score=79.7, Expect=4e-16]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00005078, src-2, Tyrosine protein-kinase src-2, [Score=74.3, Expect=7e-14]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=101, Expect=1e-22]} {RNA1509_40801} {RNA1310_6167} {RNA815_66.1} |
| 12. | MligTC455_31257 | 229 | 4.78 | Mlig455_070423 | Neo: - Age: - |
STK3 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_070423 {REF} {Length: 3240} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=175.9]; C terminal SARAH domain of Mst1 [PF11629.10, score=69.2]; ABC1 atypical kinase-like domain [PF03109.18, score=37.8]; Fungal protein kinase [PF17667.3, score=36.0]} {Human: ENSG00000104375, STK3, serine/threonine kinase 3, [RH, Score=553, Expect=0.0]} {Mouse: ENSMUSG00000022329, Stk3, serine/threonine kinase 3, [RH, Score=548, Expect=0.0]; ENSMUSG00000018209, Stk4, serine/threonine kinase 4, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0261456, hpo, hippo, [RH, Score=462, Expect=9e-157]} {Celegans: WBGene00017472, cst-1, Serine/threonine-protein kinase cst-1 Serine/threonine-protein kinase cst-1 37kDa subunit Serine/threonine-protein kinase cst-1 18kDa subunit, [RH, Score=492, Expect=5e-171]} {Smed: dd_Smed_v6_4384_0_1, dd_Smed_v6_4384_0_1, [RH, Score=479, Expect=3e-166]} {RNA1509_15462} {RNA1310_15236, RNA1509_15462} {RNA1509_15462, RNA815_5298.1} |
| 13. | MligTC455_14987 | 120 | 2.51 | Mlig455_035861 | Neo: - Age: logFC(26M/2M)=-0.513 Region-enriched R5: 3.064/0.03582 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_035861 {REF} {Length: 1791} {RNA1509_35962, RNA1509_38914, RNA1509_41630, RNA1509_9548} {RNA1310_24349, RNA1509_35962, RNA1509_38914, RNA1509_41630, RNA1509_9548} {RNA1509_35962, RNA1509_38914, RNA1509_41630, RNA1509_9548, RNA815_6020} |
Berezikov Lab - 2020-2021 © ERIBA