TomoSeq data search

Data search

Results for MligTC455_27413

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27413	35	0.73	Mlig455_061428	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.295	TLN1	Mlig455_061428 {REF} {Length: 9019} {Pfam: I/LWEQ domain [PF01608.19, score=163.1]; Talin, middle domain [PF09141.12, score=97.8]; FERM central domain [PF00373.20, score=81.5]; Vinculin Binding Site [PF08913.12, score=27.2]} {Human: ENSG00000137076, TLN1, talin 1, [Score=1194, Expect=0.0]; ENSG00000171914, TLN2, talin 2, [Score=1147, Expect=0.0]} {Mouse: ENSMUSG00000028465, Tln1, talin 1, [Score=1186, Expect=0.0]; ENSMUSG00000052698, Tln2, talin 2, [Score=1142, Expect=0.0]} {Dmel: FBgn0260442, rhea, [Score=992, Expect=0.0]} {Celegans: WBGene00006771, tln-1, TaLiN; Talin, [Score=483, Expect=1e-137]} {Smed: dd_Smed_v6_876_0_1, dd_Smed_v6_876_0_1, [Score=769, Expect=0.0]} {RNA1509_38276} {RNA1310_1325} {RNA815_75.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27413

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.134	0.965	0.99950	1.00000
RegionR2	-0.182	0.965	0.87668	1.00000
RegionR3	0.433	0.965	0.71599	1.00000
RegionR4	1.598	0.965	0.49160	0.81818
RegionR5	0.782	0.965	0.58874	0.94692
RegionR6	1.672	0.965	0.22706	0.80909
RegionR7	0.2	0.965	0.76867	1.00000
RegionR8	-1.369	0.965	0.99981	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.087	0.965	0.99957	1.00000
RegenerationR2	-1.703	0.965	0.09478	0.48957
RegenerationR3	-1.101	0.965	0.46504	0.84104
RegenerationR4	0.205	0.965	0.69476	0.95172
RegenerationR5	-0.423	0.965	0.85849	1.00000
RegenerationR6	-0.948	0.965	0.35237	0.69755
RegenerationBL	0.69	0.965	0.70391	1.00000
RegenerationTP	1.762	0.965	0.51632	0.91167

Genes with expression patterns similar to MligTC455_27413

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27413	35	0.73	Mlig455_061428	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.295	TLN1	3	-	-	1.000	1.000	1.000	-	Mlig455_061428 {REF} {Length: 9019} {Pfam: I/LWEQ domain [PF01608.19, score=163.1]; Talin, middle domain [PF09141.12, score=97.8]; FERM central domain [PF00373.20, score=81.5]; Vinculin Binding Site [PF08913.12, score=27.2]} {Human: ENSG00000137076, TLN1, talin 1, [Score=1194, Expect=0.0]; ENSG00000171914, TLN2, talin 2, [Score=1147, Expect=0.0]} {Mouse: ENSMUSG00000028465, Tln1, talin 1, [Score=1186, Expect=0.0]; ENSMUSG00000052698, Tln2, talin 2, [Score=1142, Expect=0.0]} {Dmel: FBgn0260442, rhea, [Score=992, Expect=0.0]} {Celegans: WBGene00006771, tln-1, TaLiN; Talin, [Score=483, Expect=1e-137]} {Smed: dd_Smed_v6_876_0_1, dd_Smed_v6_876_0_1, [Score=769, Expect=0.0]} {RNA1509_38276} {RNA1310_1325} {RNA815_75.1}
2.	MligTC455_12516	29	0.61	Mlig455_023132	Neo: - Age: -	FCN2	0.979	-	-	0.979	-	-	-	Mlig455_023132 {REF} {Length: 2517} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=61.0]; PAN domain [PF14295.8, score=24.6]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=75.9, Expect=9e-15]} {Mouse: ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=50.1, Expect=3e-06]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=49.7, Expect=4e-06]; ENSMUSG00000028553, Angptl3, angiopoietin-like 3, [Score=48.1, Expect=1e-05]; ENSMUSG00000002289, Angptl4, angiopoietin-like 4, [Score=47.8, Expect=1e-05]} {Dmel: FBgn0031804, CG9500, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=49.7, Expect=2e-06]} {RNA1509_53291} {RNA1310_30694.1} {RNA815_10579.2}
3.	MligTC455_19648	125	2.6	Mlig455_034667, Mlig455_067587	Neo: - Age: - Regeneration-downregulated BL: -7.490 Regeneration-depleted BL: -7.490	CHRNA7, CHRNA9	0.972	-	-	0.972	-	-	-	Mlig455_034667 {REF} {Length: 1938} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=125.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=97.4]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=210, Expect=4e-62]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=207, Expect=9e-61]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=207, Expect=2e-61]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=205, Expect=4e-60]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=202, Expect=4e-59]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=200, Expect=1e-58]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=213, Expect=2e-63]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=206, Expect=1e-60]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=217, Expect=3e-64]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=207, Expect=2e-61]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=202, Expect=1e-58]} {RNA1310_33414.1} {RNA815_34654} Mlig455_067587 {REF} {Length: 1709} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=158.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=96.7]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=230, Expect=8e-69]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=230, Expect=8e-69]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=228, Expect=3e-68]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=224, Expect=1e-66]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=230, Expect=3e-69]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=227, Expect=3e-68]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=221, Expect=8e-66]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=237, Expect=3e-71]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=236, Expect=1e-71]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=232, Expect=2e-69]} {RNA1310_33414.2} {RNA815_34654}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_27413

0.73

Mlig455_061428

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.295

TLN1

1.000

MligTC455_12516

0.61

Mlig455_023132

Neo: -

Age: -

FCN2

0.979

Mlig455_023132 {REF} {Length: 2517} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=61.0]; PAN domain [PF14295.8, score=24.6]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=75.9, Expect=9e-15]} {Mouse: ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=50.1, Expect=3e-06]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=49.7, Expect=4e-06]; ENSMUSG00000028553, Angptl3, angiopoietin-like 3, [Score=48.1, Expect=1e-05]; ENSMUSG00000002289, Angptl4, angiopoietin-like 4, [Score=47.8, Expect=1e-05]} {Dmel: FBgn0031804, CG9500, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=49.7, Expect=2e-06]} {RNA1509_53291} {RNA1310_30694.1} {RNA815_10579.2}

MligTC455_19648

125

2.6

Mlig455_034667, Mlig455_067587

Neo: -

Age: -

Regeneration-downregulated BL: -7.490

Regeneration-depleted BL: -7.490

CHRNA7, CHRNA9

0.972

Mlig455_034667 {REF} {Length: 1938} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=125.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=97.4]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=210, Expect=4e-62]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=207, Expect=9e-61]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=207, Expect=2e-61]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=205, Expect=4e-60]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=202, Expect=4e-59]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=200, Expect=1e-58]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=213, Expect=2e-63]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=206, Expect=1e-60]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=217, Expect=3e-64]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=207, Expect=2e-61]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=202, Expect=1e-58]} {RNA1310_33414.1} {RNA815_34654}

Mlig455_067587 {REF} {Length: 1709} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=158.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=96.7]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=230, Expect=8e-69]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=230, Expect=8e-69]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=228, Expect=3e-68]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=224, Expect=1e-66]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=230, Expect=3e-69]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=227, Expect=3e-68]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=221, Expect=8e-66]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=237, Expect=3e-71]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=236, Expect=1e-71]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=232, Expect=2e-69]} {RNA1310_33414.2} {RNA815_34654}