TomoSeq data search

Data search

Results for MligTC455_27456

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27456	761	15.84	Mlig455_018386	Neo: - Age: logFC(26M/2M)=-0.256	PTP4A2	Mlig455_018386 {REF} {Length: 4466} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=22.1]; Protein-tyrosine phosphatase [PF00102.29, score=19.7]; Cyclin-dependent kinase inhibitor 3 (CDKN3) [PF05706.14, score=18.9]} {Human: ENSG00000184007, PTP4A2, protein tyrosine phosphatase type IVA, member 2, [RH, Score=173, Expect=1e-55]; ENSG00000112245, PTP4A1, protein tyrosine phosphatase type IVA, member 1, [RH, Score=173, Expect=2e-55]; ENSG00000275575, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]; ENSG00000184489, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]} {Mouse: ENSMUSG00000028788, Ptp4a2, protein tyrosine phosphatase 4a2, [RH, Score=173, Expect=1e-55]; ENSMUSG00000026064, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]; ENSMUSG00000059895, Ptp4a3, protein tyrosine phosphatase 4a3, [RH, Score=173, Expect=1e-55]; ENSMUSG00000117310, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]} {Dmel: FBgn0024734, PRL-1, PRL-1 phosphatase, [RH, Score=180, Expect=3e-58]} {Celegans: WBGene00004184, T19D2.2, Putative prenylated protein tyrosine phosphatase, [RH, Score=175, Expect=2e-56]} {Smed: dd_Smed_v6_2239_0_1, dd_Smed_v6_2239_0_1, [RH, Score=165, Expect=9e-53]} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1310_18393.1, RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731, RNA815_7379}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27456

761

15.84

Mlig455_018386

Neo: -

Age: logFC(26M/2M)=-0.256

PTP4A2

Mlig455_018386 {REF} {Length: 4466} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=22.1]; Protein-tyrosine phosphatase [PF00102.29, score=19.7]; Cyclin-dependent kinase inhibitor 3 (CDKN3) [PF05706.14, score=18.9]} {Human: ENSG00000184007, PTP4A2, protein tyrosine phosphatase type IVA, member 2, [RH, Score=173, Expect=1e-55]; ENSG00000112245, PTP4A1, protein tyrosine phosphatase type IVA, member 1, [RH, Score=173, Expect=2e-55]; ENSG00000275575, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]; ENSG00000184489, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]} {Mouse: ENSMUSG00000028788, Ptp4a2, protein tyrosine phosphatase 4a2, [RH, Score=173, Expect=1e-55]; ENSMUSG00000026064, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]; ENSMUSG00000059895, Ptp4a3, protein tyrosine phosphatase 4a3, [RH, Score=173, Expect=1e-55]; ENSMUSG00000117310, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]} {Dmel: FBgn0024734, PRL-1, PRL-1 phosphatase, [RH, Score=180, Expect=3e-58]} {Celegans: WBGene00004184, T19D2.2, Putative prenylated protein tyrosine phosphatase, [RH, Score=175, Expect=2e-56]} {Smed: dd_Smed_v6_2239_0_1, dd_Smed_v6_2239_0_1, [RH, Score=165, Expect=9e-53]} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1310_18393.1, RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731, RNA815_7379}

Cumulative graph for MligTC455_27456

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.333	4.356	0.76178	1.00000
RegionR2	-0.391	4.356	0.45621	0.84398
RegionR3	0.723	4.356	0.06561	0.45184
RegionR4	1.057	4.356	0.03787	0.15986
RegionR5	0.362	4.356	0.32862	0.67298
RegionR6	0.257	4.356	0.53426	1.00000
RegionR7	-1.186	4.356	0.04376	0.40207
RegionR8	-1.154	4.356	0.08253	0.54535

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.877	4.356	0.10289	0.82145
RegenerationR2	0.269	4.356	0.53629	0.88669
RegenerationR3	-0.605	4.356	0.19524	0.63061
RegenerationR4	-0.381	4.356	0.45255	0.84347
RegenerationR5	-0.332	4.356	0.46488	0.83984
RegenerationR6	-0.113	4.356	0.81524	0.98468
RegenerationBL	0.579	4.356	0.32217	0.68883
RegenerationTP	0.117	4.356	0.86692	1.00000

Genes with expression patterns similar to MligTC455_27456

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27456	761	15.84	Mlig455_018386	Neo: - Age: logFC(26M/2M)=-0.256	PTP4A2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018386 {REF} {Length: 4466} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=22.1]; Protein-tyrosine phosphatase [PF00102.29, score=19.7]; Cyclin-dependent kinase inhibitor 3 (CDKN3) [PF05706.14, score=18.9]} {Human: ENSG00000184007, PTP4A2, protein tyrosine phosphatase type IVA, member 2, [RH, Score=173, Expect=1e-55]; ENSG00000112245, PTP4A1, protein tyrosine phosphatase type IVA, member 1, [RH, Score=173, Expect=2e-55]; ENSG00000275575, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]; ENSG00000184489, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]} {Mouse: ENSMUSG00000028788, Ptp4a2, protein tyrosine phosphatase 4a2, [RH, Score=173, Expect=1e-55]; ENSMUSG00000026064, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]; ENSMUSG00000059895, Ptp4a3, protein tyrosine phosphatase 4a3, [RH, Score=173, Expect=1e-55]; ENSMUSG00000117310, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]} {Dmel: FBgn0024734, PRL-1, PRL-1 phosphatase, [RH, Score=180, Expect=3e-58]} {Celegans: WBGene00004184, T19D2.2, Putative prenylated protein tyrosine phosphatase, [RH, Score=175, Expect=2e-56]} {Smed: dd_Smed_v6_2239_0_1, dd_Smed_v6_2239_0_1, [RH, Score=165, Expect=9e-53]} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1310_18393.1, RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731, RNA815_7379}
2.	MligTC455_20983	101	2.1	Mlig455_024861	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R4: 4.002/0.02064		1.764	-	-	-	-	0.952	0.812	Mlig455_024861 {REF} {Length: 1131} {RNA1509_31693} {RNA1310_36320} {RNA815_19506}
3.	MligTC455_38415	1262	26.3	Mlig455_024390, Mlig455_024503	Neo: - Age: Up-Down-Down		1.762	-	0.793	-	-	-	0.969	Mlig455_024390 {REF} {Length: 7424} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.0]; Immunoglobulin I-set domain [PF07679.18, score=47.5]; Immunoglobulin domain [PF00047.27, score=39.6]; Immunoglobulin domain [PF13895.8, score=29.2]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=58.9, Expect=4e-08]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=58.5, Expect=5e-08]} {Smed: dd_Smed_v6_3934_0_1, dd_Smed_v6_3934_0_1, [Score=91.7, Expect=2e-18]} {RNA1509_4898} {RNA1310_3079.1} {RNA815_8412} Mlig455_024503 {REF} {Length: 7623} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.6]; Immunoglobulin I-set domain [PF07679.18, score=47.7]; Immunoglobulin domain [PF00047.27, score=40.0]; Immunoglobulin domain [PF13895.8, score=30.9]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=64.3, Expect=1e-09]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=56.6, Expect=2e-07]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_13217_0_1, dd_Smed_v6_13217_0_1, [Score=69.3, Expect=1e-11]} {RNA1509_33099, RNA1509_4898} {RNA1310_3079.1, RNA1509_33099} {RNA1509_33099, RNA815_8412}
4.	MligTC455_37864	7221	150.44	Mlig455_020281	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_020281 {REF} {Length: 575} {TRANSSPLICED} {RNA1509_10408, RNA1509_11423, RNA1509_12198, RNA1509_47553, RNA1509_6144} {RNA1310_61583.2, RNA1509_10408, RNA1509_11423, RNA1509_12198, RNA1509_47553, RNA1509_6144} {RNA1509_10408, RNA1509_11423, RNA1509_12198, RNA1509_47553, RNA1509_6144, RNA815_31445}
5.	MligTC455_34056	318	6.63	Mlig455_063731	Neo: - Age: Up-Down-Down	ZNF345	0.966	-	-	-	-	-	0.966	Mlig455_063731 {REF} {Length: 3139} {Human: ENSG00000251247, ZNF345, zinc finger protein 345, [Score=56.2, Expect=6e-08]} {Mouse: ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=54.7, Expect=3e-07]} {RNA1509_28658, RNA1509_40441} {RNA1310_1087.1, RNA1509_40441} {RNA1509_40441, RNA815_9861.1}
6.	MligTC455_43034	470	9.79	Mlig455_009703	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_009703 {REF} {Length: 4741} {Pfam: NHL repeat [PF01436.23, score=34.6]} {Dmel: FBgn0265356, tn, thin, [Score=53.9, Expect=2e-07]} {RNA1509_22989} {RNA1310_8201.1, RNA1509_22989} {RNA1509_22989, RNA815_27967}