Data search
Results for MligTC455_38415
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38415 | 1262 | 26.30 | Mlig455_024390, Mlig455_024503 | Neo: - Age: Up-Down-Down |
Mlig455_024390 {REF} {Length: 7424} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.0]; Immunoglobulin I-set domain [PF07679.18, score=47.5]; Immunoglobulin domain [PF00047.27, score=39.6]; Immunoglobulin domain [PF13895.8, score=29.2]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=58.9, Expect=4e-08]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=58.5, Expect=5e-08]} {Smed: dd_Smed_v6_3934_0_1, dd_Smed_v6_3934_0_1, [Score=91.7, Expect=2e-18]} {RNA1509_4898} {RNA1310_3079.1} {RNA815_8412} Mlig455_024503 {REF} {Length: 7623} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.6]; Immunoglobulin I-set domain [PF07679.18, score=47.7]; Immunoglobulin domain [PF00047.27, score=40.0]; Immunoglobulin domain [PF13895.8, score=30.9]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=64.3, Expect=1e-09]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=56.6, Expect=2e-07]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_13217_0_1, dd_Smed_v6_13217_0_1, [Score=69.3, Expect=1e-11]} {RNA1509_33099, RNA1509_4898} {RNA1310_3079.1, RNA1509_33099} {RNA1509_33099, RNA815_8412} |
Cumulative graph for MligTC455_38415
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.282 | 4.942 | 0.23966 | 0.88608 | |
| RegionR2 | 0.638 | 4.942 | 0.25560 | 0.63603 | |
| RegionR3 | -0.019 | 4.942 | 0.96994 | 1.00000 | |
| RegionR4 | -0.49 | 4.942 | 0.38362 | 0.70823 | |
| RegionR5 | -0.139 | 4.942 | 0.75641 | 1.00000 | |
| RegionR6 | 0.261 | 4.942 | 0.57060 | 1.00000 | |
| RegionR7 | 0.689 | 4.942 | 0.14575 | 0.70992 | |
| RegionR8 | 0.342 | 4.942 | 0.53960 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.082 | 4.942 | 0.96188 | 1.00000 | |
| RegenerationR2 | 0.298 | 4.942 | 0.58262 | 0.90839 | |
| RegenerationR3 | 0.141 | 4.942 | 0.81087 | 0.98533 | |
| RegenerationR4 | -0.388 | 4.942 | 0.53194 | 0.88462 | |
| RegenerationR5 | -0.223 | 4.942 | 0.69253 | 0.94883 | |
| RegenerationR6 | -0.153 | 4.942 | 0.79817 | 0.97593 | |
| RegenerationBL | 0.168 | 4.942 | 0.76806 | 1.00000 | |
| RegenerationTP | 0.266 | 4.942 | 0.66059 | 0.99394 |
Genes with expression patterns similar to MligTC455_38415
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38415 | 1262 | 26.3 | Mlig455_024390, Mlig455_024503 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024390 {REF} {Length: 7424} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.0]; Immunoglobulin I-set domain [PF07679.18, score=47.5]; Immunoglobulin domain [PF00047.27, score=39.6]; Immunoglobulin domain [PF13895.8, score=29.2]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=58.9, Expect=4e-08]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=58.5, Expect=5e-08]} {Smed: dd_Smed_v6_3934_0_1, dd_Smed_v6_3934_0_1, [Score=91.7, Expect=2e-18]} {RNA1509_4898} {RNA1310_3079.1} {RNA815_8412} Mlig455_024503 {REF} {Length: 7623} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=69.6]; Immunoglobulin I-set domain [PF07679.18, score=47.7]; Immunoglobulin domain [PF00047.27, score=40.0]; Immunoglobulin domain [PF13895.8, score=30.9]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [Score=64.3, Expect=1e-09]} {Dmel: FBgn0261046, Dscam3, Down syndrome cell adhesion molecule 3, [Score=56.6, Expect=2e-07]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_13217_0_1, dd_Smed_v6_13217_0_1, [Score=69.3, Expect=1e-11]} {RNA1509_33099, RNA1509_4898} {RNA1310_3079.1, RNA1509_33099} {RNA1509_33099, RNA815_8412} |
|
| 2. | MligTC455_27456 | 761 | 15.84 | Mlig455_018386 | Neo: - Age: logFC(26M/2M)=-0.256 |
PTP4A2 | 1.762 | - | 0.793 | - | - | - | 0.969 | Mlig455_018386 {REF} {Length: 4466} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=22.1]; Protein-tyrosine phosphatase [PF00102.29, score=19.7]; Cyclin-dependent kinase inhibitor 3 (CDKN3) [PF05706.14, score=18.9]} {Human: ENSG00000184007, PTP4A2, protein tyrosine phosphatase type IVA, member 2, [RH, Score=173, Expect=1e-55]; ENSG00000112245, PTP4A1, protein tyrosine phosphatase type IVA, member 1, [RH, Score=173, Expect=2e-55]; ENSG00000275575, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]; ENSG00000184489, PTP4A3, protein tyrosine phosphatase type IVA, member 3, [RH, Score=171, Expect=2e-54]} {Mouse: ENSMUSG00000028788, Ptp4a2, protein tyrosine phosphatase 4a2, [RH, Score=173, Expect=1e-55]; ENSMUSG00000026064, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]; ENSMUSG00000059895, Ptp4a3, protein tyrosine phosphatase 4a3, [RH, Score=173, Expect=1e-55]; ENSMUSG00000117310, Ptp4a1, protein tyrosine phosphatase 4a1, [RH, Score=173, Expect=2e-55]} {Dmel: FBgn0024734, PRL-1, PRL-1 phosphatase, [RH, Score=180, Expect=3e-58]} {Celegans: WBGene00004184, T19D2.2, Putative prenylated protein tyrosine phosphatase, [RH, Score=175, Expect=2e-56]} {Smed: dd_Smed_v6_2239_0_1, dd_Smed_v6_2239_0_1, [RH, Score=165, Expect=9e-53]} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1310_18393.1, RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731} {RNA1509_21016, RNA1509_24408, RNA1509_45786, RNA1509_8731, RNA815_7379} |
| 3. | MligTC455_33244 | 553 | 11.51 | Mlig455_051395 | Neo: - Age: - |
ATMIN | 1.744 | - | - | 0.965 | - | - | 0.779 | Mlig455_051395 {REF} {Length: 3989} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=27.0]; C2H2-type zinc finger [PF13894.8, score=21.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.9]} {Human: ENSG00000166454, ATMIN, ATM interactor, [RH, Score=75.5, Expect=8e-14]} {Mouse: ENSMUSG00000047388, Atmin, ATM interactor, [RH, Score=77.4, Expect=2e-14]} {Celegans: WBGene00016427, C34H4.5, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_7949_0_1, dd_Smed_v6_7949_0_1, [RH, Score=77.8, Expect=2e-15]} {RNA1509_15608, RNA1509_36170, RNA1509_37178} {RNA1310_15728.1, RNA1509_15608, RNA1509_36170, RNA1509_37178} {RNA1509_15608, RNA1509_36170, RNA1509_37178, RNA815_11525.1} |
| 4. | MligTC455_20622 | 1920 | 39.99 | Mlig455_005399 | Neo: - Age: - Regeneration-upregulated TP: 2.098 Regeneration-enriched TP: 2.098 |
0.968 | - | - | - | - | 0.968 | - | Mlig455_005399 {REF} {Length: 1131} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_12443, RNA1509_3} {RNA1310_14828.1, RNA1509_12443, RNA1509_3} {RNA1509_12443, RNA1509_3, RNA815_44673} | |
| 5. | MligTC455_36470 | 328 | 6.84 | Mlig455_041285 | Neo: - Age: - |
KIAA1147 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_041285 {REF} {Length: 3791} {TRANSSPLICED} {Pfam: DENN domain-containing protein 11 [PF09804.11, score=122.4]; Stabilization of polarity axis [PF08616.12, score=25.6]; Transport protein Avl9 [PF09794.11, score=19.5]} {Human: ENSG00000262599, KIAA1147, KIAA1147, [RH, Score=177, Expect=1e-50]; ENSG00000257093, KIAA1147, KIAA1147, [RH, Score=177, Expect=1e-50]} {Mouse: ENSMUSG00000037172, E330009J07Rik, RIKEN cDNA E330009J07 gene, [RH, Score=175, Expect=6e-50]} {Smed: dd_Smed_v6_8805_0_1, dd_Smed_v6_8805_0_1, [RH, Score=150, Expect=1e-41]} {RNA1509_24390, RNA1509_41050} {RNA1310_15611, RNA1509_24390, RNA1509_41050} {RNA1509_24390, RNA1509_41050, RNA815_38780} |
| 6. | MligTC455_29705 | 84 | 1.74 | Mlig455_068931 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_068931 {REF} {Length: 4351} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=210.9]; PIF1-like helicase [PF05970.16, score=107.2]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=62.8, Expect=1e-09]} {Celegans: WBGene00019136, F59H6.5, [Score=468, Expect=8e-144]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [RH, Score=125, Expect=9e-34]} {RNA1509_53692} {RNA1310_981} {RNA815_15863} | |
| 7. | MligTC455_30613 | 560 | 11.68 | Mlig455_066031 | Neo: - Age: Up-Down-Down |
HCK | 0.963 | - | - | - | - | - | 0.963 | Mlig455_066031 {REF} {Length: 4573} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=313.0]; Protein kinase domain [PF00069.27, score=164.9]; SH2 domain [PF00017.26, score=61.3]; SH3 domain [PF00018.30, score=49.4]; Variant SH3 domain [PF14604.8, score=42.0]; Variant SH3 domain [PF07653.19, score=32.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.5]; Haspin like kinase domain [PF12330.10, score=18.6]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [RH, Score=443, Expect=5e-151]} {Mouse: ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [RH, Score=443, Expect=7e-151]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=447, Expect=1e-152]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=418, Expect=7e-142]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [RH, Score=599, Expect=0.0]} {RNA1509_17483, RNA1509_47972} {RNA1310_7339, RNA1509_17483, RNA1509_47972} {RNA1509_17483, RNA1509_47972, RNA815_2133.1} |
| 8. | MligTC455_23405 | 1199 | 24.97 | Mlig455_019205 | Neo: - Age: - |
ADAMTSL1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_019205 {REF} {Length: 3744} {TRANSSPLICED} {Pfam: Thrombospondin type 1 domain [PF19030.2, score=110.2]; Thrombospondin type 1 domain [PF00090.21, score=28.8]; Immunoglobulin domain [PF13927.8, score=24.4]; PLAC (protease and lacunin) domain [PF08686.13, score=21.3]} {Human: ENSG00000178031, ADAMTSL1, ADAMTS like 1, [RH, Score=114, Expect=3e-25]} {Mouse: ENSMUSG00000066113, Adamtsl1, ADAMTS-like 1, [RH, Score=113, Expect=4e-25]} {Dmel: FBgn0051619, nolo, no long nerve cord, [RH, Score=100, Expect=3e-21]} {Celegans: WBGene00009958, madd-4, [RH, Score=167, Expect=4e-43]} {Smed: dd_Smed_v6_6962_0_1, dd_Smed_v6_6962_0_1, [RH, Score=184, Expect=6e-50]} {RNA1509_4750} {RNA1310_2104.1, RNA1509_4750} {RNA1509_4750, RNA815_1856.1} |
| 9. | MligTC455_14955 | 12 | 0.25 | Mlig455_058159 | Neo: - Age: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_058159 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_122094} | |
| 10. | MligTC455_52723 | 157 | 3.27 | Mlig455_032070 | Neo: - Age: logFC(26M/2M)=-0.577 |
PRKCB | 0.957 | - | - | - | 0.957 | - | - | Mlig455_032070 {REF} {Length: 4571} {Pfam: Protein kinase domain [PF00069.27, score=153.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=90.9]; Protein kinase C terminal domain [PF00433.26, score=32.6]} {Human: ENSG00000166501, PRKCB, protein kinase C beta, [Score=377, Expect=9e-128]} {Mouse: ENSMUSG00000052889, Prkcb, protein kinase C, beta, [Score=376, Expect=1e-127]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [Score=367, Expect=6e-126]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [Score=355, Expect=2e-119]} {Smed: dd_Smed_v6_4244_0_2, dd_Smed_v6_4244_0_2, [Score=385, Expect=2e-131]} {RNA1509_41314} {RNA1310_23181} {RNA815_9794.2} |
| 11. | MligTC455_27468 | 40 | 0.84 | Mlig455_013749 | Neo: - Age: - |
LNPEP | 0.955 | - | - | - | 0.955 | - | - | Mlig455_013749 {REF} {Length: 4937} {Pfam: Peptidase family M1 domain [PF01433.22, score=195.1]; Peptidase M1 N-terminal domain [PF17900.3, score=121.7]} {Human: ENSG00000113441, LNPEP, leucyl and cystinyl aminopeptidase, [Score=289, Expect=5e-85]; ENSG00000172901, LVRN, laeverin, [Score=282, Expect=1e-82]; ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=277, Expect=4e-81]; ENSG00000164307, ERAP1, endoplasmic reticulum aminopeptidase 1, [Score=275, Expect=3e-80]} {Mouse: ENSMUSG00000023845, Lnpep, leucyl/cystinyl aminopeptidase, [Score=286, Expect=2e-84]} {Dmel: FBgn0052473, CG32473, [Score=293, Expect=9e-88]} {Celegans: WBGene00003914, pam-1, Aminopeptidase, [Score=251, Expect=2e-72]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=328, Expect=5e-100]} {RNA1509_14706} {RNA1310_6661.1} {RNA815_1900.2} |
| 12. | MligTC455_39099 | 2631 | 54.81 | Mlig455_057941, Mlig455_057974, Mlig455_070742 | Neo: - Age: logFC(26M/2M)=-0.384 Region-enriched R4: 1.433/0.02316 |
SLIT3 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_057941 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323} Mlig455_057974 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323} Mlig455_070742 {REF} {Length: 4437} {Pfam: Leucine rich repeat [PF13855.8, score=54.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.6]; Leucine Rich Repeat [PF00560.35, score=21.4]; Leucine-rich repeat [PF14580.8, score=19.3]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.4, Expect=2e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.5, Expect=6e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=64.3, Expect=3e-10]; ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=61.2, Expect=3e-09]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=61.2, Expect=2e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=4e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=116, Expect=1e-27]} {RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1310_9830, RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1509_17236, RNA1509_20558, RNA1509_8042, RNA815_3323} |
| 13. | MligTC455_06799 | 162 | 3.38 | Mlig455_031787 | Neo: - Age: - |
PRR9 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_031787 {REF} {Length: 3692} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=5e-07]} {RNA1509_12420} {RNA1310_87698} {RNA815_45856.1} |
| 14. | MligTC455_35617 | 108 | 2.24 | Mlig455_048363 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_048363 {REF} {Length: 5379} {RNA1310_66856} | |
| 15. | MligTC455_52769 | 73 | 1.51 | Mlig455_005296 | Neo: - Age: Up-Down-Up |
0.95 | - | - | - | - | 0.950 | - | Mlig455_005296 {REF} {Length: 1157} {TRANSSPLICED} {RNA1509_54814} {RNA1310_30336.1} {RNA815_6347.1} |