Data search
Results for MligTC455_27462
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27462 | 41 | 0.85 | Mlig455_067315 | Neo: - Age: - |
Mlig455_067315 {REF} {Length: 446} {RNA1509_44107} {RNA1310_27961} {RNA815_35358} |
Cumulative graph for MligTC455_27462
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.021 | 1.423 | 0.99974 | 1.00000 | |
| RegionR2 | 1.724 | 1.423 | 0.29204 | 0.68043 | |
| RegionR3 | -1.957 | 1.423 | 0.97190 | 1.00000 | |
| RegionR4 | 1.829 | 1.423 | 0.21968 | 0.50841 | |
| RegionR5 | 1.966 | 1.423 | 0.08113 | 0.26460 | |
| RegionR6 | 0.337 | 1.423 | 0.59747 | 1.00000 | |
| RegionR7 | -2.269 | 1.423 | 0.99988 | 1.00000 | |
| RegionR8 | -1.61 | 1.423 | 0.99983 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.69 | 1.423 | 0.99990 | 1.00000 | |
| RegenerationR2 | -1.728 | 1.423 | 0.02633 | 0.26842 | |
| RegenerationR3 | 2.111 | 1.423 | 0.16412 | 0.59866 | |
| RegenerationR4 | -0.814 | 1.423 | 0.46152 | 0.84814 | |
| RegenerationR5 | 0.566 | 1.423 | 0.55338 | 0.88744 | |
| RegenerationR6 | 0.009 | 1.423 | 0.98643 | 1.00000 | |
| RegenerationBL | 2.248 | 1.423 | 0.23656 | 0.59004 | |
| RegenerationTP | -1.15 | 1.423 | 0.99988 | 1.00000 |
Genes with expression patterns similar to MligTC455_27462
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27462 | 41 | 0.85 | Mlig455_067315 | Neo: - Age: - |
4 | - | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_067315 {REF} {Length: 446} {RNA1509_44107} {RNA1310_27961} {RNA815_35358} | |
| 2. | MligTC455_28259 | 102 | 2.11 | Mlig455_063848 | Neo: - Age: Down-Down-Down Region-enriched R5: 2.857/0.00001 |
1.8 | - | - | - | - | 0.847 | 0.953 | Mlig455_063848 {REF} {Length: 1817} {Pfam: PMG protein [PF05287.14, score=19.3]} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} | |
| 3. | MligTC455_47753 | 540 | 11.25 | Mlig455_025424 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.577/0.00074 |
1.752 | - | - | - | - | 0.952 | 0.800 | Mlig455_025424 {REF} {Length: 1697} {TRANSSPLICED} {RNA1509_20139, RNA1509_33887} {RNA1310_18333, RNA1509_20139, RNA1509_33887} {RNA1509_20139, RNA1509_33887, RNA815_2604} | |
| 4. | MligTC455_23254 | 56 | 1.16 | Mlig455_020486 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_020486 {REF} {Length: 1473} {TRANSSPLICED} {RNA1310_31763} {RNA815_30486} | |
| 5. | MligTC455_37193 | 76 | 1.59 | Mlig455_008152 | Neo: - |
GRIN3B | 0.967 | - | - | - | - | - | 0.967 | Mlig455_008152 {REF} {Length: 5365} {Pfam: Ligand-gated ion channel [PF00060.28, score=72.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=34.2]} {Human: ENSG00000116032, GRIN3B, glutamate ionotropic receptor NMDA type subunit 3B, [Score=197, Expect=9e-51]; ENSG00000198785, GRIN3A, glutamate ionotropic receptor NMDA type subunit 3A, [Score=196, Expect=2e-50]} {Mouse: ENSMUSG00000039579, Grin3a, glutamate receptor ionotropic, NMDA3A, [Score=199, Expect=2e-51]; ENSMUSG00000035745, Grin3b, glutamate receptor, ionotropic, NMDA3B, [Score=191, Expect=2e-51]} {Dmel: FBgn0053513, Nmdar2, NMDA receptor 2, [Score=127, Expect=1e-29]} {Celegans: WBGene00003775, nmr-2, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-2, [Score=125, Expect=3e-30]} {Smed: dd_Smed_v6_21610_0_1, dd_Smed_v6_21610_0_1, [RH, Score=342, Expect=3e-102]} {RNA1509_51928} {RNA1310_29785} {RNA815_54514} |
| 6. | MligTC455_41790 | 350 | 7.3 | Mlig455_013734 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.281 Region-enriched R5: 1.651/0.00086 |
SDR16C5 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_013734 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=144.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=96.3]; KR domain [PF08659.12, score=37.6]} {Human: ENSG00000170786, SDR16C5, short chain dehydrogenase/reductase family 16C member 5, [Score=209, Expect=1e-65]} {Mouse: ENSMUSG00000028236, Sdr16c5, short chain dehydrogenase/reductase family 16C, member 5, [Score=213, Expect=4e-67]} {Dmel: FBgn0031630, CG15629, [Score=172, Expect=2e-51]} {Celegans: WBGene00000982, dhs-19, DeHydrogenases, Short chain, [Score=187, Expect=2e-57]} {Smed: dd_Smed_v6_13574_0_6, dd_Smed_v6_13574_0_6, [RH, Score=219, Expect=2e-69]} {RNA1509_31599, RNA1509_38654, RNA1509_38684} {RNA1310_34497, RNA1509_38654, RNA1509_38684} {RNA1509_38654, RNA1509_38684, RNA815_11020.2} |
| 7. | MligTC455_43027 | 41 | 0.86 | Mlig455_006959 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_006959 {REF} {Length: 748} {NoTransDecoderORF} {RNA1310_101532} | |
| 8. | MligTC455_44706 | 695 | 14.48 | Mlig455_048568, Mlig455_049046 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.781/0.00154 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_048568 {REF} {Length: 3178} {Pfam: Tudor domain [PF00567.26, score=60.2]} {RNA1509_8410} {RNA1310_5719.1} {RNA815_14685} Mlig455_049046 {REF} {Length: 3717} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=60.1]} {RNA1509_44602, RNA1509_8410} {RNA1310_5719.1, RNA1509_44602} {RNA1509_44602, RNA815_14685} |
|
| 9. | MligTC455_51290 | 43 | 0.9 | Mlig455_031006 | Neo: Int S/G2/M Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_031006 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: Transmembrane family 220, helix [PF15071.8, score=75.0]; 7TM diverse intracellular signalling [PF07695.13, score=19.4]} {RNA1509_52987} {RNA1310_37259} {RNA815_33266.1} | |
| 10. | MligTC455_21686 | 377 | 7.85 | Mlig455_016616 | Neo: - Age: Down-Up-Up |
0.956 | - | - | - | - | - | 0.956 | Mlig455_016616 {REF} {Length: 1395} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=30.2]; Tetratricopeptide repeat [PF07719.19, score=25.3]} {Smed: dd_Smed_v6_438_0_1, dd_Smed_v6_438_0_1, [RH, Score=104, Expect=4e-25]} {RNA1509_14239} {RNA1310_24039.2} {RNA815_28568} | |
| 11. | MligTC455_44705 | 329 | 6.86 | Mlig455_048425 | Neo: - Age: - Region-enriched R5: 1.944/0.00052 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_048425 {REF} {Length: 421} {NoTransDecoderORF} {RNA1509_44162} {RNA1310_5719.1} {RNA815_18868} | |
| 12. | MligTC455_44820 | 40 | 0.84 | Mlig455_002329 | Neo: - Age: Down-Up-Up |
0.954 | - | - | - | - | - | 0.954 | Mlig455_002329 {REF} {Length: 2594} {RNA1310_13211.1} {RNA815_63372} | |
| 13. | MligTC455_13227 | 114 | 2.38 | Mlig455_059425 | Neo: - Age: - Region-enriched R5: 3.436/0.00076 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_059425 {REF} {Length: 2024} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.8]} {RNA1509_50589} {RNA1310_17944, RNA1509_50589} {RNA1509_50589, RNA815_7628} | |
| 14. | MligTC455_42176 | 140 | 2.92 | Mlig455_020323 | Neo: - Age: - Region-enriched R5: 3.097/0.00177 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_020323 {REF} {Length: 1851} {TRANSSPLICED} {RNA1509_49842} {RNA1310_13463.2, RNA1509_49842} {RNA1509_49842, RNA815_16944} | |
| 15. | MligTC455_43445 | 98 | 2.05 | Mlig455_043288 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_043288 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=86.6]} {Dmel: FBgn0034172, CG6665, [Score=57.8, Expect=2e-09]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288} |
Berezikov Lab - 2020-2021 © ERIBA