Data search


search
Exact
Search

Results for MligTC455_27587

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27587 199 4.15 Mlig455_008699

Neo: -

Age: Up-Down-Up

NYNRIN Mlig455_008699 {REF} {Length: 2861} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=64.6]; Integrase core domain [PF00665.28, score=56.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=31.3]; Aspartyl protease [PF13650.8, score=26.8]; Retroviral aspartyl protease [PF00077.22, score=24.2]; H2C2 zinc finger [PF09337.12, score=21.6]; Integrase core domain [PF13683.8, score=19.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.0, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=69.3, Expect=2e-11]} {Dmel: FBgn0002707, mei-9, meiotic 9, [Score=69.7, Expect=8e-12]} {Celegans: WBGene00008140, xpf-1, (Xeroderma Pigmentosum group F) DNA repair gene homolog, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=118, Expect=7e-28]} {RNA1509_6282} {RNA1310_617} {RNA815_1602}

Cumulative graph for MligTC455_27587

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.144 2.434 0.43976 1.00000
RegionR2 0.36 2.434 0.72873 1.00000
RegionR3 -0.549 2.434 0.96094 1.00000
RegionR4 -1.025 2.434 0.98868 1.00000
RegionR5 -1.217 2.434 0.99291 1.00000
RegionR6 2.075 2.434 0.01948 0.25117
RegionR7 1.729 2.434 0.12578 0.66810
RegionR8 2.77 2.434 0.02172 0.28768

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.058 2.434 0.35538 1.00000
RegenerationR2 0.096 2.434 0.91149 1.00000
RegenerationR3 0.125 2.434 0.90488 1.00000
RegenerationR4 0.245 2.434 0.80397 0.98748
RegenerationR5 0.867 2.434 0.36189 0.77314
RegenerationR6 -0.211 2.434 0.79839 0.97612
RegenerationBL -1.021 2.434 0.31981 0.68718
RegenerationTP -1.159 2.434 0.29020 0.73536


Genes with expression patterns similar to MligTC455_27587

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27587 199 4.15 Mlig455_008699

Neo: -

Age: Up-Down-Up

NYNRIN 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_008699 {REF} {Length: 2861} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=64.6]; Integrase core domain [PF00665.28, score=56.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=31.3]; Aspartyl protease [PF13650.8, score=26.8]; Retroviral aspartyl protease [PF00077.22, score=24.2]; H2C2 zinc finger [PF09337.12, score=21.6]; Integrase core domain [PF13683.8, score=19.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.0, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=69.3, Expect=2e-11]} {Dmel: FBgn0002707, mei-9, meiotic 9, [Score=69.7, Expect=8e-12]} {Celegans: WBGene00008140, xpf-1, (Xeroderma Pigmentosum group F) DNA repair gene homolog, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=118, Expect=7e-28]} {RNA1509_6282} {RNA1310_617} {RNA815_1602}
2. MligTC455_52429 232 4.83 Mlig455_049286

Neo: -

Age: -

Region-enriched R6: 2.609/0.00077

Regeneration-downregulated BL: -3.364

Regeneration-depleted BL: -3.364

1.684 0.975 0.709 - - - - Mlig455_049286 {REF} {Length: 2059} {Pfam: Alpha helical domain [PF18489.3, score=21.4]} {Smed: dd_Smed_v6_6222_0_1, dd_Smed_v6_6222_0_1, [Score=47.4, Expect=5e-06]} {RNA1509_15833} {RNA1310_15418} {RNA815_15438}
3. MligTC455_49348 106 2.22 Mlig455_042275

Neo: -

Age: -

0.97 - - - - - 0.970 Mlig455_042275 {REF} {Length: 1278} {NoTransDecoderORF} {RNA1509_58228} {RNA1310_48769.2} {RNA815_29333}
4. MligTC455_26192 601 12.53 Mlig455_024017

Neo: -

Age: Up-Down-Down

Region-enriched R4: 1.726/0.00705

PEF1 0.965 - - - - - 0.965 Mlig455_024017 {REF} {Length: 2220} {Pfam: EF-hand domain [PF13405.8, score=57.8]; EF hand [PF00036.34, score=54.8]; EF-hand domain pair [PF13499.8, score=52.9]; EF hand [PF13202.8, score=43.0]; EF-hand domain pair [PF13833.8, score=35.1]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=93.6, Expect=6e-22]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=94.4, Expect=2e-22]} {Dmel: FBgn0033529, CG17765, [Score=97.8, Expect=1e-24]} {Celegans: WBGene00019770, M04F3.4, [Score=84.0, Expect=8e-20]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=96.7, Expect=1e-24]} {RNA1509_8928} {RNA1310_11493} {RNA815_7652.1}
5. MligTC455_48215 758 15.8 Mlig455_034512

Neo: -

Age: -

Region-enriched R6: 3.449/0.00001

MFSD5 0.959 - - - - 0.959 - Mlig455_034512 {REF} {Length: 3164} {TRANSSPLICED} {Pfam: Sugar-tranasporters, 12 TM [PF05631.16, score=417.2]; Major Facilitator Superfamily [PF07690.18, score=66.8]} {Human: ENSG00000182544, MFSD5, major facilitator superfamily domain containing 5, [RH, Score=216, Expect=1e-64]} {Mouse: ENSMUSG00000045665, Mfsd5, major facilitator superfamily domain containing 5, [RH, Score=218, Expect=2e-65]} {Celegans: WBGene00021870, samt-1, SAM (S-Adenosyl Methionine) Transporter, [RH, Score=457, Expect=9e-159]} {Smed: dd_Smed_v6_3699_0_1, dd_Smed_v6_3699_0_1, [RH, Score=468, Expect=7e-163]} {RNA1509_16998} {RNA1310_11819.3} {RNA815_4719.1}
6. MligTC455_43450 476 9.91 Mlig455_006566

Neo: -

Age: logFC(26M/2M)=-0.266

0.951 - - - - - 0.951 Mlig455_006566 {REF} {Length: 1796} {RNA1509_28274, RNA1509_30562} {RNA1310_18324, RNA1509_28274} {RNA1509_28274, RNA815_16556}
7. MligTC455_52274 404 8.42 Mlig455_060338

Neo: -

Age: logFC(26M/2M)=0.241

MLLT10 0.951 - - - - - 0.951 Mlig455_060338 {REF} {Length: 4097} {TRANSSPLICED} {Pfam: PHD-zinc-finger like domain [PF13832.8, score=69.8]; PHD-finger [PF13831.8, score=37.3]; PHD-like zinc-binding domain [PF13771.8, score=32.0]; PHD-finger [PF00628.31, score=31.2]} {Human: ENSG00000078403, MLLT10, MLLT10, histone lysine methyltransferase DOT1L cofactor, [Score=147, Expect=9e-36]; ENSG00000275851, MLLT6, MLLT6, PHD finger containing, [Score=142, Expect=6e-34]; ENSG00000275023, MLLT6, MLLT6, PHD finger containing, [Score=142, Expect=6e-34]} {Mouse: ENSMUSG00000026743, Mllt10, myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10, [Score=148, Expect=4e-36]; ENSMUSG00000038437, Mllt6, myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6, [Score=141, Expect=5e-34]} {Dmel: FBgn0261238, Alh, Alhambra, [Score=149, Expect=2e-36]} {Celegans: WBGene00006975, zfp-1, isoform a, [Score=128, Expect=4e-30]} {Smed: dd_Smed_v6_7497_0_1, dd_Smed_v6_7497_0_1, [Score=134, Expect=2e-32]} {RNA1509_20411, RNA1509_52660} {RNA1310_17114, RNA1509_20411, RNA1509_52660} {RNA1509_20411, RNA1509_52660, RNA815_34430.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA