Data search
Results for MligTC455_52429
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52429 | 232 | 4.83 | Mlig455_049286 | Neo: - Age: - Region-enriched R6: 2.609/0.00077 Regeneration-downregulated BL: -3.364 Regeneration-depleted BL: -3.364 |
Mlig455_049286 {REF} {Length: 2059} {Pfam: Alpha helical domain [PF18489.3, score=21.4]} {Smed: dd_Smed_v6_6222_0_1, dd_Smed_v6_6222_0_1, [Score=47.4, Expect=5e-06]} {RNA1509_15833} {RNA1310_15418} {RNA815_15438} |
Cumulative graph for MligTC455_52429
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.314 | 2.73 | 0.23635 | 0.88061 | |
| RegionR2 | 1.459 | 2.73 | 0.10568 | 0.40068 | |
| RegionR3 | -1.207 | 2.73 | 0.99258 | 1.00000 | |
| RegionR4 | -1.431 | 2.73 | 0.99573 | 1.00000 | |
| RegionR5 | -1.172 | 2.73 | 0.99175 | 1.00000 | |
| RegionR6 | 2.609 | 2.73 | 0.00001 | 0.00077 | |
| RegionR7 | 2.131 | 2.73 | 0.01227 | 0.19486 | |
| RegionR8 | 2.925 | 2.73 | 0.00188 | 0.07187 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.715 | 2.73 | 0.99993 | 1.00000 | |
| RegenerationR2 | -0.332 | 2.73 | 0.47895 | 0.86285 | |
| RegenerationR3 | 0.835 | 2.73 | 0.25645 | 0.69066 | |
| RegenerationR4 | 0.872 | 2.73 | 0.19205 | 0.63653 | |
| RegenerationR5 | 0.929 | 2.73 | 0.13422 | 0.54270 | |
| RegenerationR6 | -2.009 | 2.73 | 0.00021 | 0.01393 | |
| RegenerationBL | -3.364 | 2.73 | 0.00014 | 0.00564 | Specific for BL: -3.364 |
| RegenerationTP | -0.961 | 2.73 | 0.15496 | 0.58231 |
Genes with expression patterns similar to MligTC455_52429
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52429 | 232 | 4.83 | Mlig455_049286 | Neo: - Age: - Region-enriched R6: 2.609/0.00077 Regeneration-downregulated BL: -3.364 Regeneration-depleted BL: -3.364 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049286 {REF} {Length: 2059} {Pfam: Alpha helical domain [PF18489.3, score=21.4]} {Smed: dd_Smed_v6_6222_0_1, dd_Smed_v6_6222_0_1, [Score=47.4, Expect=5e-06]} {RNA1509_15833} {RNA1310_15418} {RNA815_15438} | |
| 2. | MligTC455_27587 | 199 | 4.15 | Mlig455_008699 | Neo: - Age: Up-Down-Up |
NYNRIN | 1.684 | 0.975 | 0.709 | - | - | - | - | Mlig455_008699 {REF} {Length: 2861} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=64.6]; Integrase core domain [PF00665.28, score=56.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=31.3]; Aspartyl protease [PF13650.8, score=26.8]; Retroviral aspartyl protease [PF00077.22, score=24.2]; H2C2 zinc finger [PF09337.12, score=21.6]; Integrase core domain [PF13683.8, score=19.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.0, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=69.3, Expect=2e-11]} {Dmel: FBgn0002707, mei-9, meiotic 9, [Score=69.7, Expect=8e-12]} {Celegans: WBGene00008140, xpf-1, (Xeroderma Pigmentosum group F) DNA repair gene homolog, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=118, Expect=7e-28]} {RNA1509_6282} {RNA1310_617} {RNA815_1602} |
| 3. | MligTC455_07924 | 186 | 3.88 | Mlig455_035763 | Neo: - Age: Up-Down-Up Region-enriched R6: 4.491/0.00000 |
OSR1 | 1.667 | 0.954 | 0.713 | - | - | - | - | Mlig455_035763 {REF} {Length: 2539} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=56.5]; C2H2-type zinc finger [PF13894.8, score=41.8]; Zinc-finger double domain [PF13465.8, score=38.0]; C2H2-type zinc finger [PF13912.8, score=25.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=23.5]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [Score=155, Expect=3e-46]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [Score=155, Expect=4e-46]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [Score=155, Expect=2e-46]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [Score=155, Expect=2e-46]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=161, Expect=1e-47]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=159, Expect=1e-48]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [Score=171, Expect=6e-53]} {RNA1509_57522} {RNA1310_42919} {RNA815_20495} |
| 4. | MligTC455_36139 | 100 | 2.08 | Mlig455_066701 | Neo: - Age: Down-Up-Down Regeneration-enriched BL: 5.772 |
MGAT1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_066701 {REF} {Length: 3880} {Pfam: GNT-I family [PF03071.17, score=238.5]; Glycosyltransferase like family 2 [PF13641.8, score=25.1]; N-acetylglucosaminyltransferase II (MGAT2) [PF05060.16, score=20.6]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=167, Expect=3e-46]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=183, Expect=3e-52]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=174, Expect=9e-49]} {Celegans: WBGene00001637, gly-12, GLYcosylation related; UDP-N-acetylglucosamine:a-3-D-mannoside b-1,2-N-acetylglucosaminyltransferase I, [Score=167, Expect=2e-46]} {Smed: dd_Smed_v6_13024_0_1, dd_Smed_v6_13024_0_1, [Score=160, Expect=3e-44]} {RNA1509_17370} {RNA1310_12882.1} {RNA815_5789.1} |
| 5. | MligTC455_22811 | 174 | 3.63 | Mlig455_057604, Mlig455_070785 | Neo: - |
PLEC | 0.957 | - | - | - | 0.957 | - | - | Mlig455_057604 {REF} {Length: 15474} {TRANSSPLICED} {Pfam: Plectin repeat [PF00681.22, score=632.5]; Calponin homology (CH) domain [PF00307.33, score=131.8]; OCRE domain [PF17780.3, score=47.1]; Cocaine and amphetamine regulated transcript protein (CART) [PF06373.13, score=34.7]; CAMSAP CH domain [PF11971.10, score=25.2]; Pre-PUA-like domain [PF17832.3, score=21.0]; YtxH-like protein [PF12732.9, score=19.9]} {Human: ENSG00000178209, PLEC, plectin, [Score=301, Expect=1e-80]; ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=287, Expect=4e-76]} {Mouse: ENSMUSG00000022565, Plec, plectin, [Score=288, Expect=1e-76]; ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=286, Expect=6e-76]} {Dmel: FBgn0013733, shot, short stop, [Score=342, Expect=3e-93]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=271, Expect=5e-72]} {Smed: dd_Smed_v6_1205_0_12, dd_Smed_v6_1205_0_12, [Score=213, Expect=4e-54]} {RNA1509_17430, RNA1509_20039, RNA1509_38834, RNA1509_7307, RNA1509_7891} {RNA1310_1207, RNA1509_17430, RNA1509_20039, RNA1509_38834, RNA1509_7891} {RNA1509_17430, RNA1509_20039, RNA1509_38834, RNA1509_7891, RNA815_972.1} Mlig455_070785 {REF} {Length: 13675} {Pfam: Plectin repeat [PF00681.22, score=194.8]; Calponin homology (CH) domain [PF00307.33, score=57.6]; YtxH-like protein [PF12732.9, score=26.0]; Pre-PUA-like domain [PF17832.3, score=20.6]} {Human: ENSG00000178209, PLEC, plectin, [Score=147, Expect=4e-34]} {Mouse: ENSMUSG00000022565, Plec, plectin, [Score=145, Expect=2e-33]} {Dmel: FBgn0013733, shot, short stop, [Score=175, Expect=9e-43]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=139, Expect=4e-32]} {Smed: dd_Smed_v6_1205_0_16, dd_Smed_v6_1205_0_16, [Score=120, Expect=1e-26]} {RNA1509_53030} {RNA1310_1207} {RNA815_972.1} |