Data search
Results for MligTC455_27655
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27655 | 371 | 7.72 | Mlig455_030663 | Neo: - |
TUBA1C | Mlig455_030663 {REF} {Length: 2130} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=226.8]; Tubulin C-terminal domain [PF03953.19, score=178.4]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=870, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [RH, Score=857, Expect=0.0]} {Mouse: ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0003886, alphaTub85E, alpha-Tubulin at 85E, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=839, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_1, dd_Smed_v6_10947_0_1, [RH, Score=835, Expect=0.0]} {RNA1509_33716, RNA1509_9718} {RNA1310_10339.1, RNA1509_33716} {RNA1509_33716, RNA815_1715.1} |
Cumulative graph for MligTC455_27655
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.819 | 3.341 | 0.15761 | 0.77674 | |
| RegionR2 | 1.31 | 3.341 | 0.14697 | 0.47818 | |
| RegionR3 | 1.535 | 3.341 | 0.03988 | 0.34793 | |
| RegionR4 | 0.885 | 3.341 | 0.36925 | 0.69251 | |
| RegionR5 | 0.516 | 3.341 | 0.57494 | 0.93318 | |
| RegionR6 | 0.557 | 3.341 | 0.56356 | 1.00000 | |
| RegionR7 | -0.579 | 3.341 | 0.96451 | 1.00000 | |
| RegionR8 | 1.595 | 3.341 | 0.17522 | 0.75406 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.952 | 3.341 | 0.51109 | 1.00000 | |
| RegenerationR2 | 0.002 | 3.341 | 0.99942 | 1.00000 | |
| RegenerationR3 | 0.265 | 3.341 | 0.62749 | 0.91924 | |
| RegenerationR4 | 0.575 | 3.341 | 0.34080 | 0.77217 | |
| RegenerationR5 | 0.786 | 3.341 | 0.15400 | 0.57377 | |
| RegenerationR6 | 1.272 | 3.341 | 0.03150 | 0.22177 | |
| RegenerationBL | 0.726 | 3.341 | 0.28546 | 0.64729 | |
| RegenerationTP | -0.11 | 3.341 | 0.90992 | 1.00000 |
Genes with expression patterns similar to MligTC455_27655
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27655 | 371 | 7.72 | Mlig455_030663 | Neo: - |
TUBA1C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030663 {REF} {Length: 2130} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=226.8]; Tubulin C-terminal domain [PF03953.19, score=178.4]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=870, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [RH, Score=857, Expect=0.0]} {Mouse: ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0003886, alphaTub85E, alpha-Tubulin at 85E, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=839, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_1, dd_Smed_v6_10947_0_1, [RH, Score=835, Expect=0.0]} {RNA1509_33716, RNA1509_9718} {RNA1310_10339.1, RNA1509_33716} {RNA1509_33716, RNA815_1715.1} |
| 2. | MligTC455_39099 | 2631 | 54.81 | Mlig455_057941, Mlig455_057974, Mlig455_070742 | Neo: - Age: logFC(26M/2M)=-0.384 Region-enriched R4: 1.433/0.02316 |
SLIT3 | 1.763 | - | 0.963 | - | - | 0.800 | - | Mlig455_057941 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323} Mlig455_057974 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323} Mlig455_070742 {REF} {Length: 4437} {Pfam: Leucine rich repeat [PF13855.8, score=54.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.6]; Leucine Rich Repeat [PF00560.35, score=21.4]; Leucine-rich repeat [PF14580.8, score=19.3]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.4, Expect=2e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.5, Expect=6e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=64.3, Expect=3e-10]; ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=61.2, Expect=3e-09]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=61.2, Expect=2e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=4e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=116, Expect=1e-27]} {RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1310_9830, RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1509_17236, RNA1509_20558, RNA1509_8042, RNA815_3323} |
| 3. | MligTC455_29761 | 117 | 2.44 | Mlig455_013621 | Neo: - Age: - Region-enriched R4: 3.464/0.00365 |
BEST1 | 1.712 | - | 0.958 | - | 0.754 | - | - | Mlig455_013621 {REF} {Length: 8372} {TRANSSPLICED} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.0]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=124, Expect=5e-30]; ENSG00000127325, BEST3, bestrophin 3, [Score=118, Expect=1e-27]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=1e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=228, Expect=3e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=173, Expect=2e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=355, Expect=8e-118]} {RNA1509_54677} {RNA1310_17634} {RNA815_11997} |
| 4. | MligTC455_38042 | 175 | 3.64 | Mlig455_032349 | Neo: - |
ANKRD28 | 0.968 | - | 0.968 | - | - | - | - | Mlig455_032349 {REF} {Length: 2134} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.5]; Ankyrin repeats (many copies) [PF13637.8, score=79.6]; Ankyrin repeats (many copies) [PF13857.8, score=77.6]; Ankyrin repeat [PF00023.32, score=64.8]; Ankyrin repeat [PF13606.8, score=61.6]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=67.4, Expect=2e-11]; ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=65.9, Expect=2e-11]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=67.4, Expect=1e-11]} {Dmel: FBgn0039590, CG10011, [Score=61.2, Expect=9e-10]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=58.9, Expect=2e-09]} {RNA1509_50870} {RNA1310_30962} {RNA815_23812} |
| 5. | MligTC455_48386 | 120 | 2.51 | Mlig455_053381 | Neo: - Age: logFC(26M/2M)=-0.376 |
ZC4H2 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_053381 {REF} {Length: 2396} {Pfam: Zinc finger-containing protein [PF10146.11, score=136.4]; Domain of unknown function (DUF4407) [PF14362.8, score=19.0]} {Human: ENSG00000126970, ZC4H2, zinc finger C4H2-type containing, [Score=74.3, Expect=4e-15]} {Mouse: ENSMUSG00000035062, Zc4h2, zinc finger, C4H2 domain containing, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0030806, CG13001, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00014153, vab-23, [Score=68.6, Expect=4e-13]} {Smed: dd_Smed_v6_6954_0_1, dd_Smed_v6_6954_0_1, [Score=63.9, Expect=2e-11]} {RNA1509_55758} {RNA1310_22786, RNA1509_55758} {RNA1509_55758, RNA815_23222} |
| 6. | MligTC455_45111 | 1501 | 31.27 | Mlig455_014293 | Neo: - Age: - Region-enriched R7: 1.357/0.00114 |
PXN | 0.967 | - | - | - | - | 0.967 | - | Mlig455_014293 {REF} {Length: 1897} {Pfam: LIM domain [PF00412.24, score=202.4]} {Human: ENSG00000089159, PXN, paxillin, [RH, Score=325, Expect=5e-103]} {Mouse: ENSMUSG00000029528, Pxn, paxillin, [RH, Score=320, Expect=2e-105]} {Dmel: FBgn0041789, Pax, Paxillin, [RH, Score=324, Expect=2e-107]} {Celegans: WBGene00016197, pxl-1, Paxillin homolog 1, [RH, Score=262, Expect=3e-85]} {Smed: dd_Smed_v6_9298_0_1, dd_Smed_v6_9298_0_1, [RH, Score=260, Expect=8e-85]} {RNA1509_15432} {RNA1310_4377} {RNA815_1364} |
| 7. | MligTC455_16252 | 422 | 8.8 | Mlig455_047309 | Neo: - Age: Down-Up-Up |
GRIK3 | 0.959 | - | 0.959 | - | - | - | - | Mlig455_047309 {REF} {Length: 3394} {Pfam: Ligand-gated ion channel [PF00060.28, score=64.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=31.1]; S1 RNA binding domain [PF00575.25, score=19.2]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=85.5, Expect=2e-16]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=85.1, Expect=3e-16]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=84.0, Expect=7e-16]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=88.2, Expect=2e-17]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=84.3, Expect=4e-16]} {Dmel: FBgn0038840, Grik, [Score=71.6, Expect=2e-12]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [RH, Score=105, Expect=5e-23]} {RNA1509_9480} {RNA1310_5319.1, RNA1509_9480} {RNA1509_9480, RNA815_1612} |
| 8. | MligTC455_16253 | 429 | 8.94 | Mlig455_047310 | Neo: - Age: - |
0.954 | - | 0.954 | - | - | - | - | Mlig455_047310 {REF} {Length: 1950} {NoTransDecoderORF} {RNA1509_45784} {RNA1310_39616} {RNA815_1612} | |
| 9. | MligTC455_45112 | 882 | 18.37 | Mlig455_014348 | Neo: - Age: - Region-enriched R7: 1.536/0.01344 |
PXN | 0.954 | - | - | - | - | 0.954 | - | Mlig455_014348 {REF} {Length: 1830} {Pfam: LIM domain [PF00412.24, score=202.9]} {Human: ENSG00000089159, PXN, paxillin, [RH, Score=323, Expect=2e-102]} {Mouse: ENSMUSG00000029528, Pxn, paxillin, [RH, Score=317, Expect=4e-105]} {Dmel: FBgn0041789, Pax, Paxillin, [RH, Score=322, Expect=1e-106]} {Celegans: WBGene00016197, pxl-1, Paxillin homolog 1, [RH, Score=260, Expect=6e-85]} {Smed: dd_Smed_v6_9298_0_1, dd_Smed_v6_9298_0_1, [RH, Score=259, Expect=7e-85]} {RNA1509_15432} {RNA1310_4377, RNA1509_15432} {RNA1509_15432, RNA815_1364} |
| 10. | MligTC455_42824 | 1960 | 40.83 | Mlig455_003181, Mlig455_003383 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.119 Region-enriched R4: 1.689/0.00233 |
0.952 | - | 0.952 | - | - | - | - | Mlig455_003181 {REF} {Length: 827} {TRANSSPLICED} {RNA1509_16521} {RNA1310_35144} {RNA815_16339} Mlig455_003383 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_16521, RNA1509_27006} {RNA1310_35144, RNA1509_16521, RNA1509_27006} {RNA1509_16521, RNA1509_27006, RNA815_16339} |
|
| 11. | MligTC455_24820 | 159 | 3.32 | Mlig455_055662 | Neo: - Age: - |
ETS1 | 0.951 | - | 0.951 | - | - | - | - | Mlig455_055662 {REF} {Length: 1194} {Pfam: Ets-domain [PF00178.24, score=30.3]} {Human: ENSG00000134954, ETS1, ETS proto-oncogene 1, transcription factor, [Score=44.3, Expect=1e-06]; ENSG00000157557, ETS2, ETS proto-oncogene 2, transcription factor, [Score=44.3, Expect=1e-06]; ENSG00000126767, ELK1, ELK1, ETS transcription factor, [Score=42.7, Expect=5e-06]} {Mouse: ENSMUSG00000022895, Ets2, E26 avian leukemia oncogene 2, 3' domain, [Score=44.7, Expect=8e-07]; ENSMUSG00000032035, Ets1, E26 avian leukemia oncogene 1, 5' domain, [Score=44.3, Expect=9e-07]; ENSMUSG00000009406, Elk1, ELK1, member of ETS oncogene family, [Score=43.1, Expect=3e-06]} {Dmel: FBgn0003118, pnt, pointed, [Score=44.7, Expect=5e-07]} {Celegans: WBGene00017598, F19F10.1, [Score=40.8, Expect=9e-06]} {Smed: dd_Smed_v6_2092_0_1, dd_Smed_v6_2092_0_1, [Score=48.5, Expect=2e-09]} {RNA1509_20315} {RNA1310_8950} {RNA815_30626} |
| 12. | MligTC455_37348 | 120 | 2.51 | Mlig455_035496 | Neo: - Age: logFC(26M/2M)=-0.336 |
0.951 | - | 0.951 | - | - | - | - | Mlig455_035496 {REF} {Length: 1891} {RNA1509_47045} {RNA1310_21549} {RNA815_8187} | |
| 13. | MligTC455_31817 | 509 | 10.6 | Mlig455_040709, Mlig455_064581 | Neo: - Age: - Region-enriched R8: 2.108/0.01175 |
C16orf58 | 0.95 | - | 0.950 | - | - | - | - | Mlig455_040709 {REF} {Length: 2089} {TRANSSPLICED} {Pfam: Vitamin B6 photo-protection and homoeostasis [PF04884.16, score=287.5]} {Human: ENSG00000140688, C16orf58, chromosome 16 open reading frame 58, [RH, Score=242, Expect=6e-75]} {Mouse: ENSMUSG00000030780, BC017158, cDNA sequence BC017158, [RH, Score=241, Expect=8e-75]} {Dmel: FBgn0032700, CG10338, [RH, Score=212, Expect=5e-64]} {Smed: dd_Smed_v6_6378_0_4, dd_Smed_v6_6378_0_4, [RH, Score=283, Expect=1e-91]} {RNA1509_38646} {RNA1310_22643.2} {RNA815_12880} Mlig455_064581 {REF} {Length: 5185} {Smed: dd_Smed_v6_6378_0_4, dd_Smed_v6_6378_0_4, [Score=47.0, Expect=1e-06]} {RNA1509_45578, RNA1509_49619} {RNA1310_9836, RNA1509_45578} {RNA1509_45578, RNA815_16395} |
| 14. | MligTC455_33656 | 1120 | 23.33 | Mlig455_011539, Mlig455_013661, Mlig455_037886, Mlig455_057488 | Neo: - Age: Up-Up-Down |
0.95 | - | 0.950 | - | - | - | - | Mlig455_011539 {REF} {Length: 2467} {NoTransDecoderORF} {RNA1509_53188} {RNA1310_23865} {RNA815_4512} Mlig455_013661 {REF} {Length: 2947} {NoTransDecoderORF} {RNA1509_53188} {RNA1310_36032} {RNA815_36999} Mlig455_037886 {REF} {Length: 4964} {Pfam: SAP domain [PF02037.29, score=36.4]} {RNA1509_19595, RNA1509_53188} {RNA1310_23865, RNA1509_19595, RNA1509_53188} {RNA1509_19595, RNA1509_53188, RNA815_4512} Mlig455_057488 {REF} {Length: 1861} {RNA1509_53188} {RNA1310_23865} {RNA815_4512} |