TomoSeq data search

Data search

Results for MligTC455_42824

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42824

1960

40.83

Mlig455_003181, Mlig455_003383

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.119

Region-enriched R4: 1.689/0.00233

Mlig455_003181 {REF} {Length: 827} {TRANSSPLICED} {RNA1509_16521} {RNA1310_35144} {RNA815_16339}

Mlig455_003383 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_16521, RNA1509_27006} {RNA1310_35144, RNA1509_16521, RNA1509_27006} {RNA1509_16521, RNA1509_27006, RNA815_16339}

Cumulative graph for MligTC455_42824

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.173	5.516	0.01748	0.36850
RegionR2	-0.293	5.516	0.53250	0.90360
RegionR3	0.49	5.516	0.21249	0.75366
RegionR4	1.689	5.516	0.00016	0.00233
RegionR5	0.302	5.516	0.45520	0.81728
RegionR6	0.543	5.516	0.17712	0.73941
RegionR7	-0.405	5.516	0.38538	1.00000
RegionR8	-0.153	5.516	0.76759	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.467	5.516	0.73919	1.00000
RegenerationR2	-0.1	5.516	0.83271	0.99875
RegenerationR3	0.351	5.516	0.48107	0.85055
RegenerationR4	-0.001	5.516	0.99726	1.00000
RegenerationR5	0.582	5.516	0.22607	0.65999
RegenerationR6	-0.066	5.516	0.89131	1.00000
RegenerationBL	-1.005	5.516	0.04795	0.25102
RegenerationTP	0.426	5.516	0.39691	0.82714

Genes with expression patterns similar to MligTC455_42824

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42824	1960	40.83	Mlig455_003181, Mlig455_003383	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.119 Region-enriched R4: 1.689/0.00233		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003181 {REF} {Length: 827} {TRANSSPLICED} {RNA1509_16521} {RNA1310_35144} {RNA815_16339} Mlig455_003383 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_16521, RNA1509_27006} {RNA1310_35144, RNA1509_16521, RNA1509_27006} {RNA1509_16521, RNA1509_27006, RNA815_16339}
2.	MligTC455_42465	378	7.88	Mlig455_050238	Neo: - Age: -	CCDC74B	0.962	-	0.962	-	-	-	-	Mlig455_050238 {REF} {Length: 2734} {TRANSSPLICED} {Pfam: Coiled-coil domain of unknown function [PF14916.8, score=52.5]; Coiled coil protein 74, C terminal [PF14917.8, score=44.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.9]} {Human: ENSG00000152076, CCDC74B, coiled-coil domain containing 74B, [RH, Score=57.4, Expect=1e-08]; ENSG00000163040, CCDC74A, coiled-coil domain containing 74A, [RH, Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000041617, Ccdc74a, coiled-coil domain containing 74A, [RH, Score=54.3, Expect=5e-09]} {RNA1509_28309} {RNA1310_23099.2, RNA1509_28309} {RNA1509_28309, RNA815_11185}
3.	MligTC455_41672	1000	20.83	Mlig455_043173	Neo: - Age: - Region-enriched R4: 1.280/0.01010 Region-enriched R5: 1.095/0.00356		0.961	-	-	-	0.961	-	-	Mlig455_043173 {REF} {Length: 684} {TRANSSPLICED} {RNA1509_27070, RNA1509_8868} {RNA1310_46974, RNA1509_27070} {RNA1509_27070, RNA815_26361}
4.	MligTC455_27655	371	7.72	Mlig455_030663	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.317	TUBA1C	0.952	-	0.952	-	-	-	-	Mlig455_030663 {REF} {Length: 2130} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=226.8]; Tubulin C-terminal domain [PF03953.19, score=178.4]; Tubulin domain [PF14881.8, score=19.0]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=870, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [RH, Score=857, Expect=0.0]} {Mouse: ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0003886, alphaTub85E, alpha-Tubulin at 85E, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=839, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_1, dd_Smed_v6_10947_0_1, [RH, Score=835, Expect=0.0]} {RNA1509_33716, RNA1509_9718} {RNA1310_10339.1, RNA1509_33716} {RNA1509_33716, RNA815_1715.1}

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