Data search
Results for MligTC455_27695
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27695 | 158 | 3.28 | Mlig455_002347 | Neo: Irradiation Age: - Region-enriched R5: 2.596/0.02769 |
TTC14 | Mlig455_002347 {REF} {Length: 5122} {Pfam: Tetratricopeptide repeat [PF00515.30, score=46.3]; Tetratricopeptide repeat [PF07719.19, score=37.2]; Tetratricopeptide repeat [PF13181.8, score=34.0]; TPR repeat [PF13414.8, score=32.0]; Tetratricopeptide repeat [PF13371.8, score=30.6]; Tetratricopeptide repeat [PF13428.8, score=30.6]; Tetratricopeptide repeat [PF13432.8, score=25.6]; Tetratricopeptide repeat [PF13431.8, score=23.6]; HCNGP-like protein [PF07818.15, score=22.1]} {Human: ENSG00000163728, TTC14, tetratricopeptide repeat domain 14, [RH, Score=175, Expect=2e-44]} {Mouse: ENSMUSG00000027677, Ttc14, tetratricopeptide repeat domain 14, [RH, Score=174, Expect=2e-44]} {Dmel: FBgn0037855, CG6621, [RH, Score=120, Expect=2e-27]} {Smed: dd_Smed_v6_5265_0_1, dd_Smed_v6_5265_0_1, [RH, Score=114, Expect=5e-27]} {RNA1509_37583} {RNA1310_5071} {RNA815_1247.1} |
Cumulative graph for MligTC455_27695
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.106 | 2.489 | 0.99966 | 1.00000 | |
| RegionR2 | 1.927 | 2.489 | 0.13665 | 0.45927 | |
| RegionR3 | 2.059 | 2.489 | 0.05728 | 0.42153 | |
| RegionR4 | 1.202 | 2.489 | 0.31569 | 0.63143 | |
| RegionR5 | 2.596 | 2.489 | 0.00370 | 0.02769 | |
| RegionR6 | 1.948 | 2.489 | 0.07697 | 0.51474 | |
| RegionR7 | -0.066 | 2.489 | 0.79497 | 1.00000 | |
| RegionR8 | -4.559 | 2.489 | 0.99955 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.981 | 2.489 | 0.99994 | 1.00000 | |
| RegenerationR2 | 1.347 | 2.489 | 0.04639 | 0.35601 | |
| RegenerationR3 | 0.809 | 2.489 | 0.28718 | 0.71919 | |
| RegenerationR4 | 1.051 | 2.489 | 0.20548 | 0.65198 | |
| RegenerationR5 | 0.453 | 2.489 | 0.47708 | 0.84560 | |
| RegenerationR6 | 1.012 | 2.489 | 0.19484 | 0.53423 | |
| RegenerationBL | 2.557 | 2.489 | 0.11371 | 0.39838 | |
| RegenerationTP | 4.432 | 2.489 | 0.01130 | 0.18059 |
Genes with expression patterns similar to MligTC455_27695
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27695 | 158 | 3.28 | Mlig455_002347 | Neo: Irradiation Age: - Region-enriched R5: 2.596/0.02769 |
TTC14 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002347 {REF} {Length: 5122} {Pfam: Tetratricopeptide repeat [PF00515.30, score=46.3]; Tetratricopeptide repeat [PF07719.19, score=37.2]; Tetratricopeptide repeat [PF13181.8, score=34.0]; TPR repeat [PF13414.8, score=32.0]; Tetratricopeptide repeat [PF13371.8, score=30.6]; Tetratricopeptide repeat [PF13428.8, score=30.6]; Tetratricopeptide repeat [PF13432.8, score=25.6]; Tetratricopeptide repeat [PF13431.8, score=23.6]; HCNGP-like protein [PF07818.15, score=22.1]} {Human: ENSG00000163728, TTC14, tetratricopeptide repeat domain 14, [RH, Score=175, Expect=2e-44]} {Mouse: ENSMUSG00000027677, Ttc14, tetratricopeptide repeat domain 14, [RH, Score=174, Expect=2e-44]} {Dmel: FBgn0037855, CG6621, [RH, Score=120, Expect=2e-27]} {Smed: dd_Smed_v6_5265_0_1, dd_Smed_v6_5265_0_1, [RH, Score=114, Expect=5e-27]} {RNA1509_37583} {RNA1310_5071} {RNA815_1247.1} |
| 2. | MligTC455_39677 | 246 | 5.13 | Mlig455_070813 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_070813 {REF} {Length: 3616} {TRANSSPLICED} {RNA1509_14473} {RNA1310_8555} {RNA815_3996.1} | |
| 3. | MligTC455_51076 | 304 | 6.33 | Mlig455_060575 | Neo: - Age: Down-Down-Up |
ARFGEF3 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_060575 {REF} {Length: 7036} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1981) [PF09324.12, score=27.7]} {Human: ENSG00000112379, ARFGEF3, ARFGEF family member 3, [RH, Score=316, Expect=5e-87]} {Mouse: ENSMUSG00000019852, Arfgef3, ARFGEF family member 3, [Score=290, Expect=6e-79]} {Dmel: FBgn0029834, CG5937, [Score=243, Expect=1e-64]} {Celegans: WBGene00012386, agef-1, Arf-1 Guanine nucleotide Exchange Factor homolog, [Score=73.6, Expect=1e-12]} {Smed: dd_Smed_v6_5314_0_2, dd_Smed_v6_5314_0_2, [Score=69.7, Expect=1e-11]} {RNA1509_14718} {RNA1310_5931} {RNA815_20733} |
Berezikov Lab - 2020-2021 © ERIBA