Data search
Results for MligTC455_39677
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39677 | 246 | 5.13 | Mlig455_070813 | Neo: - Age: - |
Mlig455_070813 {REF} {Length: 3616} {TRANSSPLICED} {RNA1509_14473} {RNA1310_8555} {RNA815_3996.1} |
Cumulative graph for MligTC455_39677
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.506 | 3.028 | 0.09626 | 0.65935 | |
| RegionR2 | 1.878 | 3.028 | 0.03007 | 0.19599 | |
| RegionR3 | 1.102 | 3.028 | 0.16522 | 0.68697 | |
| RegionR4 | 0.673 | 3.028 | 0.49468 | 0.82130 | |
| RegionR5 | 1.217 | 3.028 | 0.08912 | 0.28177 | |
| RegionR6 | 1.052 | 3.028 | 0.20659 | 0.78172 | |
| RegionR7 | 0.298 | 3.028 | 0.73391 | 1.00000 | |
| RegionR8 | 0.285 | 3.028 | 0.75309 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.535 | 3.028 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.461 | 3.028 | 0.32940 | 0.76695 | |
| RegenerationR3 | 0.236 | 3.028 | 0.67961 | 0.94017 | |
| RegenerationR4 | 0.176 | 3.028 | 0.77736 | 0.97957 | |
| RegenerationR5 | 0.163 | 3.028 | 0.74466 | 0.97028 | |
| RegenerationR6 | 0.348 | 3.028 | 0.56480 | 0.84868 | |
| RegenerationBL | -0.527 | 3.028 | 0.61605 | 0.95982 | |
| RegenerationTP | 0.895 | 3.028 | 0.28949 | 0.73491 |
Genes with expression patterns similar to MligTC455_39677
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39677 | 246 | 5.13 | Mlig455_070813 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070813 {REF} {Length: 3616} {TRANSSPLICED} {RNA1509_14473} {RNA1310_8555} {RNA815_3996.1} | |
| 2. | MligTC455_54039 | 319 | 6.65 | Mlig455_046626 | Neo: - Age: - |
CBX5 | 1.727 | 0.747 | - | 0.980 | - | - | - | Mlig455_046626 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=70.0]; Chromo shadow domain [PF01393.21, score=61.7]} {Human: ENSG00000094916, CBX5, chromobox 5, [Score=132, Expect=2e-38]; ENSG00000122565, CBX3, chromobox 3, [Score=130, Expect=5e-38]} {Mouse: ENSMUSG00000009575, Cbx5, chromobox 5, [Score=132, Expect=1e-38]; ENSMUSG00000029836, Cbx3, chromobox 3, [Score=130, Expect=3e-38]} {Dmel: FBgn0003607, Su(var)205, Suppressor of variegation 205, [Score=117, Expect=1e-32]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [Score=83.6, Expect=4e-20]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=121, Expect=2e-34]} {RNA1509_58928} {RNA1310_4983} {RNA815_19481.1} |
| 3. | MligTC455_23763 | 2004 | 41.75 | Mlig455_010390, Mlig455_028011 | Neo: - |
1.669 | - | - | - | 0.707 | - | 0.962 | Mlig455_010390 {REF} {Length: 3395} {RNA1509_7919} {RNA1310_7160} {RNA815_1786} Mlig455_028011 {REF} {Length: 2651} {TRANSSPLICED} {RNA1509_7919} {RNA1310_7160, RNA1509_7919} {RNA1509_7919, RNA815_1786} |
|
| 4. | MligTC455_22892 | 594 | 12.37 | Mlig455_046047 | Neo: - Age: Up-Down-Down |
0.973 | - | - | - | - | - | 0.973 | Mlig455_046047 {REF} {Length: 6303} {RNA1509_6873} {RNA1310_11390} {RNA815_14832} | |
| 5. | MligTC455_36840 | 3417 | 71.19 | Mlig455_029986 | Neo: - |
FAM49B | 0.967 | - | - | - | - | - | 0.967 | Mlig455_029986 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: CYRIA/CYRIB Rac1 binding domain [PF07159.14, score=325.6]; Yeast mitochondrial distribution and morphology (MDM) proteins [PF08118.13, score=17.6]} {Human: ENSG00000153310, FAM49B, family with sequence similarity 49 member B, [RH, Score=278, Expect=5e-92]; ENSG00000197872, FAM49A, family with sequence similarity 49 member A, [RH, Score=267, Expect=1e-87]} {Mouse: ENSMUSG00000022378, Fam49b, family with sequence similarity 49, member B, [RH, Score=278, Expect=4e-92]; ENSMUSG00000020589, Fam49a, family with sequence similarity 49, member A, [RH, Score=267, Expect=8e-88]} {Dmel: FBgn0052066, CG32066, [RH, Score=260, Expect=4e-85]} {Celegans: WBGene00019944, R07G3.8, [RH, Score=162, Expect=2e-47]} {Smed: dd_Smed_v6_1856_0_1, dd_Smed_v6_1856_0_1, [RH, Score=259, Expect=4e-85]} {RNA1509_28818, RNA1509_3232, RNA1509_42256, RNA1509_4269} {RNA1310_3063, RNA1509_28818, RNA1509_3232, RNA1509_42256, RNA1509_4269} {RNA1509_28818, RNA1509_3232, RNA1509_42256, RNA1509_4269, RNA815_4644} |
| 6. | MligTC455_25732 | 429 | 8.94 | Mlig455_027586 | Neo: - Age: - Region-enriched R4: 2.243/0.02184 |
UBE2H | 0.96 | - | - | - | - | 0.960 | - | Mlig455_027586 {REF} {Length: 3114} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=124.0]} {Human: ENSG00000186591, UBE2H, ubiquitin conjugating enzyme E2 H, [RH, Score=298, Expect=2e-103]} {Mouse: ENSMUSG00000039159, Ube2h, ubiquitin-conjugating enzyme E2H, [RH, Score=298, Expect=1e-103]} {Dmel: FBgn0029996, UbcE2H, Ubiquitin conjugating enzyme E2H, [RH, Score=270, Expect=6e-93]} {Celegans: WBGene00006705, ubc-8, UBiquitin Conjugating enzyme, [RH, Score=247, Expect=2e-83]} {Smed: dd_Smed_v6_4514_0_1, dd_Smed_v6_4514_0_1, [RH, Score=268, Expect=5e-92]} {RNA1509_28398} {RNA1310_40250, RNA1509_28398} {RNA1509_28398, RNA815_22313.1} |
| 7. | MligTC455_27695 | 158 | 3.28 | Mlig455_002347 | Neo: Irradiation Age: - Region-enriched R5: 2.596/0.02769 |
TTC14 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_002347 {REF} {Length: 5122} {Pfam: Tetratricopeptide repeat [PF00515.30, score=46.3]; Tetratricopeptide repeat [PF07719.19, score=37.2]; Tetratricopeptide repeat [PF13181.8, score=34.0]; TPR repeat [PF13414.8, score=32.0]; Tetratricopeptide repeat [PF13371.8, score=30.6]; Tetratricopeptide repeat [PF13428.8, score=30.6]; Tetratricopeptide repeat [PF13432.8, score=25.6]; Tetratricopeptide repeat [PF13431.8, score=23.6]; HCNGP-like protein [PF07818.15, score=22.1]} {Human: ENSG00000163728, TTC14, tetratricopeptide repeat domain 14, [RH, Score=175, Expect=2e-44]} {Mouse: ENSMUSG00000027677, Ttc14, tetratricopeptide repeat domain 14, [RH, Score=174, Expect=2e-44]} {Dmel: FBgn0037855, CG6621, [RH, Score=120, Expect=2e-27]} {Smed: dd_Smed_v6_5265_0_1, dd_Smed_v6_5265_0_1, [RH, Score=114, Expect=5e-27]} {RNA1509_37583} {RNA1310_5071} {RNA815_1247.1} |
| 8. | MligTC455_45690 | 2497 | 52.02 | Mlig455_051204 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.586 Region-enriched R7: 1.072/0.04886 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_051204 {REF} {Length: 1686} {RNA1509_29397} {RNA1310_21586, RNA1509_29397} {RNA1509_29397, RNA815_10734.1} | |
| 9. | MligTC455_26722 | 1102 | 22.96 | Mlig455_003923 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_003923 {REF} {Length: 4099} {Pfam: Fibronectin type III domain [PF00041.23, score=34.0]} {RNA1509_2952, RNA1509_32361, RNA1509_53164} {RNA1310_4407, RNA1509_2952, RNA1509_32361, RNA1509_53164} {RNA1509_2952, RNA1509_32361, RNA1509_53164, RNA815_1249} | |
| 10. | MligTC455_42284 | 490 | 10.21 | Mlig455_028929 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_028929 {REF} {Length: 4696} {TRANSSPLICED} {Pfam: Ataxin-2 C-terminal region [PF07145.17, score=19.2]} {RNA1509_19203, RNA1509_21390, RNA1509_23954, RNA1509_28727, RNA1509_44301} {RNA1310_17591, RNA1509_19203, RNA1509_21390, RNA1509_23954, RNA1509_28727, RNA1509_44301} {RNA1509_19203, RNA1509_21390, RNA1509_23954, RNA1509_28727, RNA1509_44301, RNA815_8032.1} |
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