TomoSeq data search

Data search

Results for MligTC455_27722

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27722

3026

63.03

Mlig455_069382

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.848

ACTG1

Mlig455_069382 {REF} {Length: 1647} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165} {RNA1310_20267.2, RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165} {RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165, RNA815_4929.3}

Cumulative graph for MligTC455_27722

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.807	6.125	0.03911	0.48298
RegionR2	-0.232	6.125	0.65590	0.98915
RegionR3	-0.255	6.125	0.56761	1.00000
RegionR4	0.332	6.125	0.50788	0.83420
RegionR5	-0.366	6.125	0.40549	0.76366
RegionR6	0.808	6.125	0.05205	0.42829
RegionR7	0.935	6.125	0.02539	0.29936
RegionR8	0.585	6.125	0.21573	0.82034

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.55	6.125	0.63711	1.00000
RegenerationR2	-0.035	6.125	0.94801	1.00000
RegenerationR3	0.192	6.125	0.73445	0.95913
RegenerationR4	0.236	6.125	0.68702	0.94805
RegenerationR5	0.162	6.125	0.77104	0.97939
RegenerationR6	-0.491	6.125	0.37708	0.71885
RegenerationBL	0.017	6.125	0.97247	1.00000
RegenerationTP	-0.077	6.125	0.88380	1.00000

Genes with expression patterns similar to MligTC455_27722

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27722	3026	63.03	Mlig455_069382	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.848	ACTG1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_069382 {REF} {Length: 1647} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165} {RNA1310_20267.2, RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165} {RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165, RNA815_4929.3}
2.	MligTC455_27721	6623	137.98	Mlig455_069364	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.996	ACTG1	4.697	0.977	0.981	0.883	0.927	-	0.929	Mlig455_069364 {REF} {Length: 1814} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_51084} {RNA1310_20267.2} {RNA815_4929.3}
3.	MligTC455_19199	545	11.36	Mlig455_030569	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.382	GNG8	2.592	0.726	-	-	0.953	-	0.913	Mlig455_030569 {REF} {Length: 1471} {Pfam: GGL domain [PF00631.24, score=53.1]} {Human: ENSG00000167414, GNG8, G protein subunit gamma 8, [Score=43.9, Expect=3e-07]; ENSG00000167083, GNGT2, G protein subunit gamma transducin 2, [Score=42.7, Expect=9e-07]} {Mouse: ENSMUSG00000095845, Gm5741, predicted gene 5741, [Score=47.8, Expect=6e-09]} {Dmel: FBgn0004921, Ggamma1, G protein gamma 1, [RH, Score=65.9, Expect=3e-16]} {Celegans: WBGene00001681, gpc-1, Guanine nucleotide-binding protein subunit gamma, [RH, Score=52.4, Expect=4e-11]} {Smed: dd_Smed_v6_1237_0_1, dd_Smed_v6_1237_0_1, [Score=97.1, Expect=7e-29]} {RNA1509_26234} {RNA1310_34416, RNA1509_26234} {RNA1509_26234, RNA815_19782}
4.	MligTC455_41115	193	4.01	Mlig455_039552, Mlig455_051356	Neo: - Age: -		0.967	-	-	-	0.967	-	-	Mlig455_039552 {REF} {Length: 834} {NoTransDecoderORF} {RNA1310_134240} Mlig455_051356 {REF} {Length: 1229} {NoTransDecoderORF} {RNA1509_8078} {RNA1310_134240} {RNA815_8663}
5.	MligTC455_24623	708	14.76	Mlig455_005339	Neo: - Age: -	B3GLCT	0.966	-	-	-	-	-	0.966	Mlig455_005339 {REF} {Length: 4975} {TRANSSPLICED} {Pfam: Fringe-like [PF02434.18, score=117.2]} {Human: ENSG00000187676, B3GLCT, beta 3-glucosyltransferase, [RH, Score=224, Expect=4e-66]} {Mouse: ENSMUSG00000051950, B3glct, beta-3-glucosyltransferase, [RH, Score=229, Expect=2e-68]} {Dmel: FBgn0031765, CG9109, [RH, Score=170, Expect=3e-46]} {Celegans: WBGene00022576, ZC250.2, [RH, Score=181, Expect=6e-51]} {Smed: dd_Smed_v6_6366_0_4, dd_Smed_v6_6366_0_4, [RH, Score=231, Expect=1e-69]} {RNA1509_13291, RNA1509_19555, RNA1509_33999} {RNA1310_14534.1, RNA1509_13291, RNA1509_19555, RNA1509_33999} {RNA1509_13291, RNA1509_19555, RNA1509_33999, RNA815_4682}
6.	MligTC455_47540	878	18.3	Mlig455_030761	Neo: Int S/G2/M Age: logFC(26M/2M)=-0.383	PRPF3	0.962	-	-	-	0.962	-	-	Mlig455_030761 {REF} {Length: 2670} {TRANSSPLICED} {Pfam: pre-mRNA processing factor 3 (PRP3) [PF08572.12, score=218.6]} {Human: ENSG00000117360, PRPF3, pre-mRNA processing factor 3, [Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000015748, Prpf3, pre-mRNA processing factor 3, [Score=280, Expect=1e-86]} {Dmel: FBgn0036915, Prp3, Precursor RNA processing 3, [Score=280, Expect=3e-88]} {Celegans: WBGene00010844, prp-3, Yeast PRP (Splicing factor) related, [Score=226, Expect=1e-66]} {Smed: dd_Smed_v6_5417_0_1, dd_Smed_v6_5417_0_1, [Score=247, Expect=3e-76]} {RNA1509_7892} {RNA1310_18508} {RNA815_4827}
7.	MligTC455_43316	1100	22.93	Mlig455_020282	Neo: Germline Age: - Region-specific R4: 1.839	TMEM101	0.956	-	-	-	0.956	-	-	Mlig455_020282 {REF} {Length: 1984} {TRANSSPLICED} {Pfam: TMEM101 protein family [PF15111.8, score=94.9]} {Human: ENSG00000091947, TMEM101, transmembrane protein 101, [RH, Score=61.6, Expect=1e-10]} {Mouse: ENSMUSG00000020921, Tmem101, transmembrane protein 101, [RH, Score=62.4, Expect=4e-11]} {Smed: dd_Smed_v6_9613_0_1, dd_Smed_v6_9613_0_1, [RH, Score=83.6, Expect=4e-19]} {RNA1509_14384} {RNA1310_32209, RNA1509_14384} {RNA1509_14384, RNA815_16851}
8.	MligTC455_02125	71	1.49	Mlig455_018608	Neo: - Age: -		0.955	-	-	-	0.955	-	-	Mlig455_018608 {REF} {Length: 513} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48039} {RNA1310_78590} {RNA815_22354}

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