Data search


search
Exact
Search

Results for MligTC455_47540

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47540 878 18.30 Mlig455_030761

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.383

PRPF3 Mlig455_030761 {REF} {Length: 2670} {TRANSSPLICED} {Pfam: pre-mRNA processing factor 3 (PRP3) [PF08572.12, score=218.6]} {Human: ENSG00000117360, PRPF3, pre-mRNA processing factor 3, [Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000015748, Prpf3, pre-mRNA processing factor 3, [Score=280, Expect=1e-86]} {Dmel: FBgn0036915, Prp3, Precursor RNA processing 3, [Score=280, Expect=3e-88]} {Celegans: WBGene00010844, prp-3, Yeast PRP (Splicing factor) related, [Score=226, Expect=1e-66]} {Smed: dd_Smed_v6_5417_0_1, dd_Smed_v6_5417_0_1, [Score=247, Expect=3e-76]} {RNA1509_7892} {RNA1310_18508} {RNA815_4827}

Cumulative graph for MligTC455_47540

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.494 4.389 0.56897 1.00000
RegionR2 -0.58 4.389 0.19513 0.55267
RegionR3 -0.373 4.389 0.32891 0.86715
RegionR4 0.327 4.389 0.43561 0.76455
RegionR5 0.764 4.389 0.02049 0.09882
RegionR6 -0.236 4.389 0.54147 1.00000
RegionR7 -0.34 4.389 0.49712 1.00000
RegionR8 -0.057 4.389 0.92474 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.305 4.389 0.11726 0.84452
RegenerationR2 0.232 4.389 0.57821 0.90599
RegenerationR3 0.2 4.389 0.64985 0.92892
RegenerationR4 0.05 4.389 0.90644 1.00000
RegenerationR5 -0.306 4.389 0.43720 0.82283
RegenerationR6 0.508 4.389 0.25286 0.60268
RegenerationBL 0.329 4.389 0.50687 0.87044
RegenerationTP 0.28 4.389 0.60040 0.96119


Genes with expression patterns similar to MligTC455_47540

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47540 878 18.3 Mlig455_030761

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.383

PRPF3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_030761 {REF} {Length: 2670} {TRANSSPLICED} {Pfam: pre-mRNA processing factor 3 (PRP3) [PF08572.12, score=218.6]} {Human: ENSG00000117360, PRPF3, pre-mRNA processing factor 3, [Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000015748, Prpf3, pre-mRNA processing factor 3, [Score=280, Expect=1e-86]} {Dmel: FBgn0036915, Prp3, Precursor RNA processing 3, [Score=280, Expect=3e-88]} {Celegans: WBGene00010844, prp-3, Yeast PRP (Splicing factor) related, [Score=226, Expect=1e-66]} {Smed: dd_Smed_v6_5417_0_1, dd_Smed_v6_5417_0_1, [Score=247, Expect=3e-76]} {RNA1509_7892} {RNA1310_18508} {RNA815_4827}
2. MligTC455_21480 2723 56.73 Mlig455_040726

Neo: Germline

Age: -

Region-enriched R5: 1.557/0.00062

ALKBH2 1.803 - - - 0.951 - 0.852 Mlig455_040726 {REF} {Length: 2043} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=48.2]} {Human: ENSG00000189046, ALKBH2, alkB homolog 2, alpha-ketoglutarate dependent dioxygenase, [Score=56.2, Expect=2e-08]} {Mouse: ENSMUSG00000044339, Alkbh2, alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_5051_0_1, dd_Smed_v6_5051_0_1, [Score=116, Expect=3e-28]} {RNA1509_10979, RNA1509_13445, RNA1509_25640, RNA1509_27221, RNA1509_33479, RNA1509_39982} {RNA1310_13379, RNA1509_10979, RNA1509_13445, RNA1509_25640, RNA1509_27221, RNA1509_33479, RNA1509_39982} {RNA1509_10979, RNA1509_13445, RNA1509_25640, RNA1509_27221, RNA1509_33479, RNA1509_39982, RNA815_8346}
3. MligTC455_43316 1100 22.93 Mlig455_020282

Neo: Germline

Age: -

Region-specific R4: 1.839

TMEM101 1.753 - - - 0.961 - 0.792 Mlig455_020282 {REF} {Length: 1984} {TRANSSPLICED} {Pfam: TMEM101 protein family [PF15111.8, score=94.9]} {Human: ENSG00000091947, TMEM101, transmembrane protein 101, [RH, Score=61.6, Expect=1e-10]} {Mouse: ENSMUSG00000020921, Tmem101, transmembrane protein 101, [RH, Score=62.4, Expect=4e-11]} {Smed: dd_Smed_v6_9613_0_1, dd_Smed_v6_9613_0_1, [RH, Score=83.6, Expect=4e-19]} {RNA1509_14384} {RNA1310_32209, RNA1509_14384} {RNA1509_14384, RNA815_16851}
4. MligTC455_49991 5411 112.72 Mlig455_044510

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=0.344

RPS16 1.687 - - - 0.960 - 0.727 Mlig455_044510 {REF} {Length: 593} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=111.4]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=245, Expect=2e-84]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=245, Expect=1e-84]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=243, Expect=8e-84]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=218, Expect=3e-74]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=207, Expect=7e-70]} {RNA1509_51406} {RNA1310_59020.2, RNA1509_51406} {RNA1509_51406, RNA815_30730}
5. MligTC455_41115 193 4.01 Mlig455_039552, Mlig455_051356

Neo: -

Age: -

0.989 - - - 0.989 - -

Mlig455_039552 {REF} {Length: 834} {NoTransDecoderORF} {RNA1310_134240}

Mlig455_051356 {REF} {Length: 1229} {NoTransDecoderORF} {RNA1509_8078} {RNA1310_134240} {RNA815_8663}
6. MligTC455_50825 281 5.85 Mlig455_044634, Mlig455_044691

Neo: -

Age: Down-Up-Up

0.977 - - 0.977 - - -

Mlig455_044634 {REF} {Length: 3296} {Mouse: ENSMUSG00000038528, Mfsd4b5, major facilitator superfamily domain containing 4B5, [Score=64.7, Expect=1e-10]; ENSMUSG00000039339, Mfsd4b2, major facilitator superfamily domain containing 4B2, [Score=64.7, Expect=1e-10]; ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=63.9, Expect=2e-10]} {RNA1509_22841} {RNA1310_2577.1, RNA1509_22841} {RNA1509_22841, RNA815_14372}

Mlig455_044691 {REF} {Length: 3166} {Mouse: ENSMUSG00000038528, Mfsd4b5, major facilitator superfamily domain containing 4B5, [Score=62.4, Expect=8e-10]; ENSMUSG00000039339, Mfsd4b2, major facilitator superfamily domain containing 4B2, [Score=62.4, Expect=5e-10]} {RNA1509_22841} {RNA1310_2577.1} {RNA815_14372}
7. MligTC455_47200 213 4.43 Mlig455_023743

Neo: -

Age: -

0.975 - - 0.975 - - - Mlig455_023743 {REF} {Length: 636} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=25.3]}
8. MligTC455_49990 5612 116.92 Mlig455_020609

Neo: -

Age: -

RPS16 0.969 - - - 0.969 - - Mlig455_020609 {REF} {Length: 603} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=111.4]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=245, Expect=2e-84]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=245, Expect=1e-84]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=243, Expect=8e-84]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=218, Expect=3e-74]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=207, Expect=7e-70]} {RNA1509_2533, RNA1509_4015} {RNA1310_59020.1, RNA1509_2533, RNA1509_4015} {RNA1509_2533, RNA1509_4015, RNA815_30730}
9. MligTC455_43895 915 19.07 Mlig455_066452

Neo: -

Age: logFC(26M/2M)=3.743

Region-enriched R3: 2.920/0.01071

PLA2G15 0.968 - - 0.968 - - - Mlig455_066452 {REF} {Length: 1473} {Pfam: Lecithin:cholesterol acyltransferase [PF02450.17, score=205.7]; Alpha/beta hydrolase family [PF12697.9, score=27.5]; Serine hydrolase [PF06821.15, score=21.3]; Serine aminopeptidase, S33 [PF12146.10, score=18.9]} {Human: ENSG00000103066, PLA2G15, phospholipase A2 group XV, [Score=256, Expect=2e-81]} {Mouse: ENSMUSG00000031903, Pla2g15, phospholipase A2, group XV, [Score=236, Expect=1e-73]; ENSMUSG00000035237, Lcat, lecithin cholesterol acyltransferase, [Score=230, Expect=6e-71]} {Dmel: FBgn0042175, CG18858, [Score=229, Expect=4e-71]} {Celegans: WBGene00010872, M05B5.4, [RH, Score=277, Expect=1e-89]} {Smed: dd_Smed_v6_8328_0_1, dd_Smed_v6_8328_0_1, [RH, Score=257, Expect=2e-82]} {RNA1509_858} {RNA1310_22091} {RNA815_9147}
10. MligTC455_02125 71 1.49 Mlig455_018608

Neo: -

Age: -

0.967 - - - 0.967 - - Mlig455_018608 {REF} {Length: 513} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48039} {RNA1310_78590} {RNA815_22354}
11. MligTC455_09772 568 11.83 Mlig455_007711

Neo: -

Age: -

0.966 - - 0.966 - - - Mlig455_007711 {REF} {Length: 762} {Pfam: RNase H [PF00075.26, score=32.9]; zinc-binding in reverse transcriptase [PF13966.8, score=20.5]} {RNA1509_42121} {RNA1310_28357.1} {RNA815_28691}
12. MligTC455_26507 103 2.14 Mlig455_012440, Mlig455_012482

Neo: -

Age: Down-Down-Down

0.965 - - 0.965 - - -

Mlig455_012440 {REF} {Length: 382} {TRANSSPLICED} {RNA1509_39210} {RNA1310_67854.2} {RNA815_3012.1}

Mlig455_012482 {REF} {Length: 1107} {TRANSSPLICED} {Pfam: Translation machinery associated TMA7 [PF09072.12, score=67.7]} {Smed: dd_Smed_v6_563_0_1, dd_Smed_v6_563_0_1, [RH, Score=66.2, Expect=1e-15]} {RNA1509_14584} {RNA1310_14574.2} {RNA815_22175.1}
13. MligTC455_28763 515 10.72 Mlig455_067928

Neo: -

Age: Up-Down-Up

0.963 - - 0.963 - - - Mlig455_067928 {REF} {Length: 2661} {RNA1509_1068} {RNA1310_15317} {RNA815_25431}
14. MligTC455_27722 3026 63.03 Mlig455_069382

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.848

ACTG1 0.962 - - - 0.962 - - Mlig455_069382 {REF} {Length: 1647} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165} {RNA1310_20267.2, RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165} {RNA1509_33142, RNA1509_38462, RNA1509_45295, RNA1509_51084, RNA1509_55165, RNA815_4929.3}
15. MligTC455_44206 1609 33.53 Mlig455_023756, Mlig455_023769, Mlig455_023781

Neo: -

Age: -

LACTB2 0.962 - - 0.962 - - -

Mlig455_023756 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=72.8]; Beta-lactamase associated winged helix domain [PF17778.3, score=25.6]; ODP family beta lactamase [PF19583.1, score=23.7]} {Human: ENSG00000147592, LACTB2, lactamase beta 2, [RH, Score=185, Expect=1e-56]} {Mouse: ENSMUSG00000025937, Lactb2, lactamase, beta 2, [RH, Score=181, Expect=3e-55]} {Dmel: FBgn0031987, CG12375, [RH, Score=173, Expect=2e-52]} {Celegans: WBGene00013176, Y53F4B.39, Beta-lactamase-like protein 2 homolog, [RH, Score=184, Expect=2e-56]} {Smed: dd_Smed_v6_7055_0_1, dd_Smed_v6_7055_0_1, [RH, Score=192, Expect=2e-59]} {RNA1509_19026} {RNA1310_16885} {RNA815_2513}

Mlig455_023769 {REF} {Length: 1651} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=72.8]; Beta-lactamase associated winged helix domain [PF17778.3, score=25.6]; ODP family beta lactamase [PF19583.1, score=23.7]} {Human: ENSG00000147592, LACTB2, lactamase beta 2, [RH, Score=185, Expect=1e-56]} {Mouse: ENSMUSG00000025937, Lactb2, lactamase, beta 2, [RH, Score=181, Expect=3e-55]} {Dmel: FBgn0031987, CG12375, [RH, Score=173, Expect=2e-52]} {Celegans: WBGene00013176, Y53F4B.39, Beta-lactamase-like protein 2 homolog, [RH, Score=184, Expect=2e-56]} {Smed: dd_Smed_v6_7055_0_1, dd_Smed_v6_7055_0_1, [RH, Score=192, Expect=2e-59]} {RNA1509_19026} {RNA1310_16885} {RNA815_2513}

Mlig455_023781 {REF} {Length: 1649} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=72.8]; Beta-lactamase associated winged helix domain [PF17778.3, score=25.6]; ODP family beta lactamase [PF19583.1, score=23.7]} {Human: ENSG00000147592, LACTB2, lactamase beta 2, [RH, Score=185, Expect=1e-56]} {Mouse: ENSMUSG00000025937, Lactb2, lactamase, beta 2, [RH, Score=181, Expect=3e-55]} {Dmel: FBgn0031987, CG12375, [RH, Score=173, Expect=2e-52]} {Celegans: WBGene00013176, Y53F4B.39, Beta-lactamase-like protein 2 homolog, [RH, Score=184, Expect=2e-56]} {Smed: dd_Smed_v6_7055_0_1, dd_Smed_v6_7055_0_1, [RH, Score=192, Expect=2e-59]} {RNA1509_19026} {RNA1310_16885, RNA1509_19026} {RNA1509_19026, RNA815_2513}
16. MligTC455_50632 730 15.2 Mlig455_035453

Neo: -

Age: logFC(26M/2M)=-1.037

Region-enriched R4: 5.727/0.00000

0.962 - - 0.962 - - - Mlig455_035453 {REF} {Length: 1360} {RNA1509_18596, RNA1509_40633} {RNA1310_43815, RNA1509_18596, RNA1509_40633} {RNA1509_18596, RNA1509_40633, RNA815_23662.3}
17. MligTC455_16658 1547 32.23 Mlig455_056718, Mlig455_060300

Neo: -

Age: -

Region-enriched R3: 1.971/0.00155
Region-enriched R4: 1.653/0.02745

0.96 - - 0.960 - - -

Mlig455_056718 {REF} {Length: 1714} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=44.7]} {RNA1509_50620, RNA1509_51103, RNA1509_8737} {RNA1310_8838, RNA1509_50620, RNA1509_51103} {RNA1509_50620, RNA1509_51103, RNA815_7244}

Mlig455_060300 {REF} {Length: 1815} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=46.9]} {Smed: dd_Smed_v6_855_0_1, dd_Smed_v6_855_0_1, [Score=47.0, Expect=5e-06]} {RNA1509_8737} {RNA1310_8838, RNA1509_8737} {RNA1509_8737, RNA815_7244}
18. MligTC455_47447 530 11.04 Mlig455_016879

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.303

SPAG9 0.96 - - 0.960 - - - Mlig455_016879 {REF} {Length: 3430} {TRANSSPLICED} {Pfam: JNK_SAPK-associated protein-1 [PF09744.11, score=126.3]; JNK-interacting protein leucine zipper II [PF16471.7, score=85.2]; Cell division protein ZapB [PF06005.14, score=22.5]} {Human: ENSG00000008294, SPAG9, sperm associated antigen 9, [Score=288, Expect=1e-84]} {Mouse: ENSMUSG00000020859, Spag9, sperm associated antigen 9, [Score=296, Expect=8e-88]; ENSMUSG00000024163, Mapk8ip3, mitogen-activated protein kinase 8 interacting protein 3, [Score=288, Expect=6e-85]} {Dmel: FBgn0024187, syd, sunday driver, [RH, Score=308, Expect=2e-92]} {Celegans: WBGene00006755, unc-16, JNK-interacting protein, [Score=263, Expect=7e-81]} {Smed: dd_Smed_v6_8581_0_1, dd_Smed_v6_8581_0_1, [RH, Score=245, Expect=6e-71]} {RNA1509_17507} {RNA1310_14663.1} {RNA815_753.1}
19. MligTC455_52021 727 15.14 Mlig455_056006, Mlig455_056102

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.846

Region-enriched R3: 1.436/0.00134
Region-enriched R4: 1.280/0.02841

0.959 - - 0.959 - - -

Mlig455_056006 {REF} {Length: 2037} {RNA1509_10875} {RNA1310_18345, RNA1509_10875} {RNA1509_10875, RNA815_7508}

Mlig455_056102 {REF} {Length: 2295} {RNA1509_10875} {RNA1310_18345} {RNA815_7508}
20. MligTC455_33114 890 18.54 Mlig455_042732

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.015/0.03599

GSTK1 0.955 - - 0.955 - - - Mlig455_042732 {REF} {Length: 996} {TRANSSPLICED} {Pfam: DSBA-like thioredoxin domain [PF01323.22, score=144.0]} {Human: ENSG00000197448, GSTK1, glutathione S-transferase kappa 1, [RH, Score=197, Expect=4e-63]} {Mouse: ENSMUSG00000029864, Gstk1, glutathione S-transferase kappa 1, [RH, Score=182, Expect=1e-57]} {Celegans: WBGene00014251, gstk-1, Glutathione S-transferase kappa 1, [RH, Score=140, Expect=2e-41]} {RNA1509_14099, RNA1509_27861, RNA1509_44106} {RNA1310_36089, RNA1509_27861, RNA1509_44106} {RNA1509_27861, RNA1509_44106, RNA815_16313}
21. MligTC455_28105 262 5.46 Mlig455_038527

Neo: -

Age: -

0.954 - - 0.954 - - - Mlig455_038527 {REF} {Length: 3543} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_9245.1} {RNA815_15623}
22. MligTC455_34286 641 13.35 Mlig455_057009

Neo: -

Age: -

0.951 - - 0.951 - - - Mlig455_057009 {REF} {Length: 1242} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35262} {RNA1310_20897, RNA1509_35262} {RNA1509_35262, RNA815_22915.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA