TomoSeq data search

Data search

Results for MligTC455_27723

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27723

27

0.56

Mlig455_006340

Neo: -

Age: -

Regeneration-upregulated R5: 6.184

Regeneration-enriched R5: 6.184

Mlig455_006340 {REF} {Length: 1455} {NoTransDecoderORF} {RNA1310_13919} {RNA815_45503.1}

Cumulative graph for MligTC455_27723

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.242	0.89	0.99978	1.00000
RegionR2	4.268	0.89	0.99985	1.00000
RegionR3	0.031	0.89	0.99996	1.00000
RegionR4	-3.992	0.89	0.99977	1.00000
RegionR5	-1.522	0.89	0.99982	1.00000
RegionR6	0.13	0.89	0.99993	1.00000
RegionR7	1.897	0.89	0.99992	1.00000
RegionR8	2.43	0.89	0.99994	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.702	0.89	0.99992	1.00000
RegenerationR2	4.108	0.89	0.00097	0.04562
RegenerationR3	5.317	0.89	0.00135	0.06028
RegenerationR4	6.167	0.89	0.00022	0.01235
RegenerationR5	6.184	0.89	0.00005	0.00902	Specific for R5: 6.184
RegenerationR6	4.382	0.89	0.00579	0.09217
RegenerationBL	0.446	0.89	0.99989	1.00000
RegenerationTP	5.725	0.89	0.00217	0.07553

Genes with expression patterns similar to MligTC455_27723

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27723	27	0.56	Mlig455_006340	Neo: - Age: - Regeneration-upregulated R5: 6.184 Regeneration-enriched R5: 6.184		2	-	-	-	-	1.000	1.000	Mlig455_006340 {REF} {Length: 1455} {NoTransDecoderORF} {RNA1310_13919} {RNA815_45503.1}
2.	MligTC455_45509	24	0.51	Mlig455_055497	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.555	PITPNM1	0.961	-	-	-	-	-	0.961	Mlig455_055497 {REF} {Length: 4896} {TRANSSPLICED} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=344.9]; DDHD domain [PF02862.19, score=121.3]} {Human: ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [Score=464, Expect=4e-142]} {Mouse: ENSMUSG00000024851, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [Score=468, Expect=6e-144]; ENSMUSG00000097096, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [Score=468, Expect=6e-144]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [Score=398, Expect=2e-118]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=358, Expect=8e-106]} {Smed: dd_Smed_v6_7211_0_1, dd_Smed_v6_7211_0_1, [Score=769, Expect=0.0]} {RNA1509_24836} {RNA1310_4306} {RNA815_17070}
3.	MligTC455_10577	22	0.46	Mlig455_044548	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_044548 {REF} {Length: 953} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=26.2]; YscO-like protein [PF16789.7, score=22.3]; Type III secretion protein YscO [PF07321.14, score=18.7]} {RNA1509_56109} {RNA1310_140905} {RNA815_33461}
4.	MligTC455_39667	106	2.2	Mlig455_070895	Neo: Irradiation Age: logFC(26M/2M)=0.457 Region-enriched R5: 2.946/0.01574	SH3RF3	0.956	-	-	-	-	0.956	-	Mlig455_070895 {REF} {Length: 4013} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=25.1} {Pfam: Variant SH3 domain [PF14604.8, score=33.4]; Variant SH3 domain [PF07653.19, score=30.9]; SH3 domain [PF00018.30, score=28.4]} {Human: ENSG00000172985, SH3RF3, SH3 domain containing ring finger 3, [Score=51.2, Expect=6e-07]; ENSG00000154447, SH3RF1, SH3 domain containing ring finger 1, [Score=50.4, Expect=1e-06]} {Mouse: ENSMUSG00000037990, Sh3rf3, SH3 domain containing ring finger 3, [Score=50.4, Expect=7e-07]; ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=50.1, Expect=8e-07]; ENSMUSG00000057719, Sh3rf2, SH3 domain containing ring finger 2, [Score=49.3, Expect=1e-06]} {Smed: dd_Smed_v6_690_0_1, dd_Smed_v6_690_0_1, [Score=45.8, Expect=5e-06]} {RNA1509_40946, RNA1509_44397} {RNA1310_24585, RNA1509_44397} {RNA1509_44397, RNA815_5406}
5.	MligTC455_08727	15	0.31	Mlig455_036809	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_036809 {REF} {Length: 2288} {RNA1509_4847} {RNA1310_36270} {RNA815_652.1}

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