Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_27953 | 627 | 13.07 | Mlig455_054072 | Neo: - |
ACP7 | Mlig455_054072 {REF} {Length: 2138} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=89.4]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=68.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=57.1]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=422, Expect=1e-144]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [Score=427, Expect=7e-146]} {Dmel: FBgn0030245, CG1637, [RH, Score=427, Expect=1e-146]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [Score=358, Expect=2e-119]} {Smed: dd_Smed_v6_2643_0_1, dd_Smed_v6_2643_0_1, [RH, Score=394, Expect=6e-134]} {RNA1509_33817, RNA1509_8623} {RNA1310_12439, RNA1509_33817, RNA1509_8623} {RNA1509_33817, RNA1509_8623, RNA815_4397} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 0.612 | 4.063 | 0.53281 | 1.00000 | |
RegionR2 | -1.522 | 4.063 | 0.01010 | 0.10132 | |
RegionR3 | 0.527 | 4.063 | 0.21439 | 0.75560 | |
RegionR4 | 0.523 | 4.063 | 0.28370 | 0.59250 | |
RegionR5 | 0.605 | 4.063 | 0.12649 | 0.35909 | |
RegionR6 | 0.234 | 4.063 | 0.60013 | 1.00000 | |
RegionR7 | -0.6 | 4.063 | 0.31478 | 0.94964 | |
RegionR8 | -0.379 | 4.063 | 0.60545 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -2.391 | 4.063 | 0.12811 | 0.86072 | |
RegenerationR2 | -0.053 | 4.063 | 0.92616 | 1.00000 | |
RegenerationR3 | -1.061 | 4.063 | 0.04347 | 0.36444 | |
RegenerationR4 | -0.787 | 4.063 | 0.13625 | 0.55644 | |
RegenerationR5 | -0.458 | 4.063 | 0.35592 | 0.76822 | |
RegenerationR6 | 0.108 | 4.063 | 0.83765 | 0.99458 | |
RegenerationBL | -1.49 | 4.063 | 0.03386 | 0.20632 | |
RegenerationTP | -1.19 | 4.063 | 0.12100 | 0.53009 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_27953 | 627 | 13.07 | Mlig455_054072 | Neo: - |
ACP7 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054072 {REF} {Length: 2138} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=89.4]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=68.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=57.1]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=422, Expect=1e-144]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [Score=427, Expect=7e-146]} {Dmel: FBgn0030245, CG1637, [RH, Score=427, Expect=1e-146]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [Score=358, Expect=2e-119]} {Smed: dd_Smed_v6_2643_0_1, dd_Smed_v6_2643_0_1, [RH, Score=394, Expect=6e-134]} {RNA1509_33817, RNA1509_8623} {RNA1310_12439, RNA1509_33817, RNA1509_8623} {RNA1509_33817, RNA1509_8623, RNA815_4397} |
2. | MligTC455_53953 | 1355 | 28.23 | Mlig455_034731 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.235 Region-enriched R4: 1.589/0.02363 |
GLUD1 | 2.566 | - | - | 0.742 | 0.857 | - | 0.967 | Mlig455_034731 {REF} {Length: 2660} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=194.2]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=169.3]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [RH, Score=777, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [RH, Score=765, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [RH, Score=640, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [RH, Score=715, Expect=0.0]} {RNA1509_10612, RNA1509_40304} {RNA1310_5462.1, RNA1509_10612, RNA1509_40304} {RNA1509_10612, RNA1509_40304, RNA815_2103.2} |
3. | MligTC455_48614 | 290 | 6.04 | Mlig455_043747, Mlig455_047478 | Neo: - Age: - |
1.742 | - | - | - | 0.786 | - | 0.956 | Mlig455_043747 {REF} {Length: 477} {RNA1509_18459} {RNA1310_80028} {RNA815_47743.1} Mlig455_047478 {REF} {Length: 477} {RNA1509_18459} {RNA1310_80028} {RNA815_47743.1} |
|
4. | MligTC455_34610 | 485 | 10.11 | Mlig455_023589 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.377 Region-enriched R4: 2.680/0.00384 |
1.736 | - | - | - | 0.785 | 0.951 | - | Mlig455_023589 {REF} {Length: 2650} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=105.9]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=115, Expect=2e-33]} {RNA1509_46399} {RNA1310_19849.1} {RNA815_14023} | |
5. | MligTC455_09419 | 952 | 19.83 | Mlig455_028591, Mlig455_028608 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.336 Region-enriched R5: 1.990/0.00000 |
ENGASE, RNASEH2B | 1.73 | - | - | - | 0.954 | 0.776 | - | Mlig455_028591 {REF} {Length: 1343} {TRANSSPLICED} {Pfam: Ydr279p protein triple barrel domain [PF17745.3, score=28.3]} {Human: ENSG00000136104, RNASEH2B, ribonuclease H2 subunit B, [RH, Score=67.4, Expect=3e-12]} {Mouse: ENSMUSG00000021932, Rnaseh2b, ribonuclease H2, subunit B, [RH, Score=57.4, Expect=5e-09]} {Smed: dd_Smed_v6_20152_0_1, dd_Smed_v6_20152_0_1, [RH, Score=65.9, Expect=3e-12]} {RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114} {RNA1310_23646.1, RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114} {RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114, RNA815_10770.1} Mlig455_028608 {REF} {Length: 2849} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 85 [PF03644.15, score=256.7]} {Human: ENSG00000167280, ENGASE, endo-beta-N-acetylglucosaminidase, [RH, Score=208, Expect=5e-61]} {Mouse: ENSMUSG00000033857, Engase, endo-beta-N-acetylglucosaminidase, [RH, Score=196, Expect=7e-57]} {Dmel: FBgn0030839, CG5613, [RH, Score=202, Expect=1e-59]} {Celegans: WBGene00017164, eng-1, Endo-b-N-acetylGlucosaminidase; Endo-beta-N-acetylglucosaminidase, [RH, Score=186, Expect=2e-55]} {Smed: dd_Smed_v6_12165_0_3, dd_Smed_v6_12165_0_3, [RH, Score=205, Expect=2e-63]} {RNA1509_24522} {RNA1310_22368} {RNA815_10770.1} |
6. | MligTC455_21685 | 642 | 13.38 | Mlig455_016564 | Neo: - |
1.715 | - | - | - | 0.976 | 0.739 | - | Mlig455_016564 {REF} {Length: 1396} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=28.9]; Tetratricopeptide repeat [PF07719.19, score=25.8]} {Smed: dd_Smed_v6_438_0_1, dd_Smed_v6_438_0_1, [RH, Score=104, Expect=5e-25]} {RNA1509_14239, RNA1509_58624} {RNA1310_24039.2, RNA1509_58624} {RNA1509_58624, RNA815_28568} | |
7. | MligTC455_21819 | 626 | 13.04 | Mlig455_044417 | Neo: - Age: - Region-enriched R5: 1.582/0.00000 |
MAP3K4 | 1.705 | - | - | - | 0.752 | 0.953 | - | Mlig455_044417 {REF} {Length: 7591} {TRANSSPLICED} {Pfam: MEKK4 N-terminal [PF19431.1, score=209.6]; Protein kinase domain [PF00069.27, score=175.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.6]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [RH, Score=209, Expect=8e-54]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [RH, Score=202, Expect=8e-52]} {Dmel: FBgn0024329, Mekk1, [RH, Score=177, Expect=2e-44]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [RH, Score=156, Expect=4e-38]} {Smed: dd_Smed_v6_3368_0_1, dd_Smed_v6_3368_0_1, [RH, Score=149, Expect=5e-36]} {RNA1509_4665, RNA1509_53156} {RNA1310_817, RNA1509_4665, RNA1509_53156} {RNA1509_4665, RNA1509_53156, RNA815_270.1} |
8. | MligTC455_16688 | 92 | 1.91 | Mlig455_068843 | Neo: - Age: logFC(26M/2M)=0.457 |
CLCA4 | 1.695 | 0.743 | - | - | - | - | 0.952 | Mlig455_068843 {REF} {Length: 4120} {Pfam: von Willebrand factor type A domain [PF13519.8, score=57.3]; von Willebrand factor type A domain [PF00092.30, score=47.6]; Calcium-activated chloride channel N terminal [PF08434.13, score=38.5]; VWA domain containing CoxE-like protein [PF05762.16, score=31.7]} {Human: ENSG00000016602, CLCA4, chloride channel accessory 4, [Score=152, Expect=5e-37]} {Mouse: ENSMUSG00000068547, Clca4a, chloride channel accessory 4A, [Score=163, Expect=1e-40]; ENSMUSG00000074195, Clca4b, chloride channel accessory 4B, [Score=157, Expect=7e-39]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=123, Expect=1e-28]} {RNA1509_33473} {RNA1310_18922.1, RNA1509_33473} {RNA1509_33473, RNA815_11795} |
9. | MligTC455_47020 | 573 | 11.94 | Mlig455_042870 | Neo: Irradiation Age: - Region-enriched R5: 1.835/0.00027 |
1.677 | - | 0.722 | - | 0.955 | - | - | Mlig455_042870 {REF} {Length: 2227} {TRANSSPLICED} {RNA1509_36308} {RNA1310_9308.1} {RNA815_15211.1} | |
10. | MligTC455_47021 | 609 | 12.68 | Mlig455_042879 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.571 Region-enriched R5: 1.845/0.00023 |
NUP35 | 1.673 | - | 0.719 | - | 0.954 | - | - | Mlig455_042879 {REF} {Length: 3231} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514} {RNA1310_9308.1} {RNA815_19261} |
11. | MligTC455_48828 | 797 | 16.6 | Mlig455_012631 | Neo: - Age: Down-Down-Down |
DHTKD1 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_012631 {REF} {Length: 4577} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=199.5]; 2-oxoglutarate dehydrogenase C-terminal [PF16870.7, score=165.1]; Dehydrogenase E1 component [PF00676.22, score=134.5]} {Human: ENSG00000181192, DHTKD1, dehydrogenase E1 and transketolase domain containing 1, [RH, Score=810, Expect=0.0]} {Mouse: ENSMUSG00000025815, Dhtkd1, dehydrogenase E1 and transketolase domain containing 1, [RH, Score=796, Expect=0.0]} {Dmel: FBgn0039827, CG1544, [RH, Score=801, Expect=0.0]} {Celegans: WBGene00014098, ogdh-2, Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial, [RH, Score=826, Expect=0.0]} {Smed: dd_Smed_v6_7384_0_1, dd_Smed_v6_7384_0_1, [RH, Score=820, Expect=0.0]} {RNA1509_22040} {RNA1310_1958.1} {RNA815_5147} |
12. | MligTC455_46570 | 1962 | 40.87 | Mlig455_043736, Mlig455_043738, Mlig455_043740, Mlig455_043830, Mlig455_047418 | Neo: Irradiation Age: Up-Down-Down |
0.964 | - | - | - | 0.964 | - | - | Mlig455_043736 {REF} {Length: 2161} {TRANSSPLICED} {RNA1509_52317} {RNA1310_20965} {RNA815_37742} Mlig455_043738 {REF} {Length: 2124} {TRANSSPLICED} {RNA1509_52317} {RNA1310_24672} {RNA815_37742} Mlig455_043740 {REF} {Length: 2189} {TRANSSPLICED} {RNA1509_52638} {RNA1310_24672} {RNA815_37742} Mlig455_043830 {REF} {Length: 2181} {TRANSSPLICED} {RNA1509_52638} {RNA1310_24672} {RNA815_37742} Mlig455_047418 {REF} {Length: 2182} {TRANSSPLICED} {RNA1509_52638} {RNA1310_24672} {RNA815_37742} |
|
13. | MligTC455_48829 | 471 | 9.81 | Mlig455_012651 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.382/0.00796 |
DHTKD1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_012651 {REF} {Length: 4604} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=199.4]; 2-oxoglutarate dehydrogenase C-terminal [PF16870.7, score=165.1]; Dehydrogenase E1 component [PF00676.22, score=133.0]} {Human: ENSG00000181192, DHTKD1, dehydrogenase E1 and transketolase domain containing 1, [RH, Score=808, Expect=0.0]} {Mouse: ENSMUSG00000025815, Dhtkd1, dehydrogenase E1 and transketolase domain containing 1, [RH, Score=793, Expect=0.0]} {Dmel: FBgn0039827, CG1544, [RH, Score=800, Expect=0.0]} {Celegans: WBGene00014098, ogdh-2, Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial, [RH, Score=825, Expect=0.0]} {Smed: dd_Smed_v6_7384_0_1, dd_Smed_v6_7384_0_1, [RH, Score=819, Expect=0.0]} {RNA1509_13272, RNA1509_22040} {RNA1310_1958.1, RNA1509_13272} {RNA1509_13272, RNA815_5147} |
14. | MligTC455_45369 | 1901 | 39.6 | Mlig455_004179 | Neo: - Age: - Region-enriched R3: 1.054/0.03430 |
HADH | 0.956 | - | - | - | 0.956 | - | - | Mlig455_004179 {REF} {Length: 1506} {Pfam: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=196.8]; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain [PF00725.24, score=126.1]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=25.2]; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus [PF01210.25, score=25.0]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=24.7]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=23.2]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=22.2]; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.16, score=22.0]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=20.0]; Glucose inhibited division protein A [PF01134.24, score=19.0]} {Human: ENSG00000138796, HADH, hydroxyacyl-CoA dehydrogenase, [RH, Score=349, Expect=3e-120]} {Mouse: ENSMUSG00000027984, Hadh, hydroxyacyl-Coenzyme A dehydrogenase, [RH, Score=353, Expect=3e-122]} {Dmel: FBgn0028479, Mtpalpha, Mitochondrial trifunctional protein alpha subunit, [Score=161, Expect=3e-44]} {Celegans: WBGene00007129, B0272.3, Probable 3-hydroxyacyl-CoA dehydrogenase B0272.3, [RH, Score=344, Expect=6e-119]} {Smed: dd_Smed_v6_725_0_2, dd_Smed_v6_725_0_2, [RH, Score=360, Expect=4e-125]} {RNA1509_1812, RNA1509_37805, RNA1509_50466} {RNA1310_24898.2, RNA1509_1812, RNA1509_37805, RNA1509_50466} {RNA1509_1812, RNA1509_37805, RNA1509_50466, RNA815_10112.1} |
15. | MligTC455_20260 | 2212 | 46.08 | Mlig455_009003, Mlig455_016540, Mlig455_016597 | Neo: - Age: - |
EPHX1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_009003 {REF} {Length: 2659} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=64.9]; Epoxide hydrolase N terminus [PF06441.14, score=52.9]} {Human: ENSG00000143819, EPHX1, epoxide hydrolase 1, [Score=334, Expect=1e-110]} {Mouse: ENSMUSG00000038776, Ephx1, epoxide hydrolase 1, microsomal, [Score=337, Expect=2e-111]} {Dmel: FBgn0034405, Jheh2, Juvenile hormone epoxide hydrolase 2, [Score=284, Expect=3e-91]} {Celegans: WBGene00020909, W01A11.1, Epoxide hydrolase, [Score=316, Expect=6e-104]} {Smed: dd_Smed_v6_5113_0_1, dd_Smed_v6_5113_0_1, [Score=291, Expect=5e-94]} {RNA1509_43717} {RNA1310_12863.2} {RNA815_5223.1} Mlig455_016540 {REF} {Length: 2059} {Pfam: Epoxide hydrolase N terminus [PF06441.14, score=60.1]} {Human: ENSG00000143819, EPHX1, epoxide hydrolase 1, [Score=80.5, Expect=2e-16]} {Mouse: ENSMUSG00000038776, Ephx1, epoxide hydrolase 1, microsomal, [Score=83.6, Expect=1e-17]} {Dmel: FBgn0010053, Jheh1, Juvenile hormone epoxide hydrolase 1, [Score=89.0, Expect=1e-19]} {Celegans: WBGene00020909, W01A11.1, Epoxide hydrolase, [Score=88.6, Expect=1e-19]} {Smed: dd_Smed_v6_5113_0_1, dd_Smed_v6_5113_0_1, [Score=91.7, Expect=7e-21]} {RNA1509_27745, RNA1509_29348, RNA1509_43717, RNA1509_6714} {RNA1310_12863.1, RNA1509_27745, RNA1509_29348, RNA1509_43717, RNA1509_6714} {RNA1509_27745, RNA1509_29348, RNA1509_43717, RNA1509_6714, RNA815_5223.1} Mlig455_016597 {REF} {Length: 2370} {Pfam: Epoxide hydrolase N terminus [PF06441.14, score=104.4]; alpha/beta hydrolase fold [PF00561.22, score=64.7]} {Human: ENSG00000143819, EPHX1, epoxide hydrolase 1, [Score=330, Expect=7e-109]} {Mouse: ENSMUSG00000038776, Ephx1, epoxide hydrolase 1, microsomal, [Score=334, Expect=9e-111]} {Dmel: FBgn0034406, Jheh3, Juvenile hormone epoxide hydrolase 3, [Score=291, Expect=8e-94]} {Celegans: WBGene00020909, W01A11.1, Epoxide hydrolase, [Score=319, Expect=3e-105]} {Smed: dd_Smed_v6_5113_0_1, dd_Smed_v6_5113_0_1, [Score=316, Expect=7e-104]} {RNA1509_27745} {RNA1310_12863.2} {RNA815_5223.1} |
16. | MligTC455_44829 | 435 | 9.07 | Mlig455_065380 | Neo: - Age: Down-Up-Up |
MED7 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_065380 {REF} {Length: 1241} {TRANSSPLICED} {Pfam: MED7 protein [PF05983.13, score=117.3]} {Human: ENSG00000155868, MED7, mediator complex subunit 7, [RH, Score=129, Expect=4e-36]} {Mouse: ENSMUSG00000020397, Med7, mediator complex subunit 7, [RH, Score=129, Expect=5e-36]} {Dmel: FBgn0051390, MED7, Mediator complex subunit 7, [RH, Score=120, Expect=1e-32]} {Celegans: WBGene00002324, let-49, Mediator of RNA polymerase II transcription subunit 7, [RH, Score=82.8, Expect=2e-18]} {Smed: dd_Smed_v6_5572_0_1, dd_Smed_v6_5572_0_1, [RH, Score=146, Expect=3e-42]} {RNA1509_24534} {RNA1310_18518.1, RNA1509_24534} {RNA1509_24534, RNA815_16326} |