Data search


search
Exact
Search

Results for MligTC455_34610

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34610 485 10.11 Mlig455_023589

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.377

Region-enriched R4: 2.680/0.00384
Region-enriched R5: 1.778/0.02397

Mlig455_023589 {REF} {Length: 2650} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=105.9]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=115, Expect=2e-33]} {RNA1509_46399} {RNA1310_19849.1} {RNA815_14023}

Cumulative graph for MligTC455_34610

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.244 3.737 0.09974 0.66667
RegionR2 -1.069 3.737 0.98880 1.00000
RegionR3 0.787 3.737 0.33388 0.87194
RegionR4 2.68 3.737 0.00029 0.00384
RegionR5 1.778 3.737 0.00306 0.02397
RegionR6 1.343 3.737 0.05269 0.43041
RegionR7 0.727 3.737 0.46274 1.00000
RegionR8 -0.002 3.737 0.85825 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.415 3.737 0.32387 1.00000
RegenerationR2 1.064 3.737 0.00684 0.13164
RegenerationR3 0.304 3.737 0.49522 0.85605
RegenerationR4 0.537 3.737 0.25427 0.70217
RegenerationR5 1.003 3.737 0.00837 0.16535
RegenerationR6 0.643 3.737 0.12870 0.44087
RegenerationBL 0.085 3.737 0.89119 1.00000
RegenerationTP 0.653 3.737 0.32074 0.76548


Genes with expression patterns similar to MligTC455_34610

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34610 485 10.11 Mlig455_023589

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.377

Region-enriched R4: 2.680/0.00384
Region-enriched R5: 1.778/0.02397

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_023589 {REF} {Length: 2650} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=105.9]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=115, Expect=2e-33]} {RNA1509_46399} {RNA1310_19849.1} {RNA815_14023}
2. MligTC455_34612 2131 44.4 Mlig455_067007

Neo: -

Age: -

Region-enriched R5: 1.162/0.00067

1.767 - - - 0.954 - 0.813 Mlig455_067007 {REF} {Length: 2823} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=70.8]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=82.4, Expect=5e-21]} {RNA1509_30092, RNA1509_38383, RNA1509_46399, RNA1509_54338, RNA1509_56432, RNA1509_57648} {RNA1310_19849.1, RNA1509_30092, RNA1509_38383, RNA1509_46399, RNA1509_54338, RNA1509_56432, RNA1509_57648} {RNA1509_30092, RNA1509_38383, RNA1509_46399, RNA1509_54338, RNA1509_56432, RNA1509_57648, RNA815_14023}
3. MligTC455_27953 627 13.07 Mlig455_054072

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.581

ACP7 1.736 - - - 0.785 0.951 - Mlig455_054072 {REF} {Length: 2138} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=89.4]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=68.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=57.1]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=422, Expect=1e-144]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [Score=427, Expect=7e-146]} {Dmel: FBgn0030245, CG1637, [RH, Score=427, Expect=1e-146]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [Score=358, Expect=2e-119]} {Smed: dd_Smed_v6_2643_0_1, dd_Smed_v6_2643_0_1, [RH, Score=394, Expect=6e-134]} {RNA1509_33817, RNA1509_8623} {RNA1310_12439, RNA1509_33817, RNA1509_8623} {RNA1509_33817, RNA1509_8623, RNA815_4397}
4. MligTC455_53940 193 4.03 Mlig455_054269

Neo: -

Age: -

1.724 - - - - 0.766 0.958 Mlig455_054269 {REF} {Length: 4291} {TRANSSPLICED} {Smed: dd_Smed_v6_10449_0_1, dd_Smed_v6_10449_0_1, [RH, Score=70.1, Expect=1e-12]} {RNA1509_15787} {RNA1310_11648} {RNA815_24912}
5. MligTC455_29945 905 18.84 Mlig455_061992

Neo: -

Age: Up-Up-Down

DDX58 1.714 - - 0.962 - - 0.752 Mlig455_061992 {REF} {Length: 1430} {TRANSSPLICED} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=70.3]; Integrase zinc binding domain [PF17921.3, score=64.0]; Helicase conserved C-terminal domain [PF00271.33, score=54.6]; Integrase core domain [PF00665.28, score=54.6]; DEAD/DEAH box helicase [PF00270.31, score=49.7]; C-terminal domain of RIG-I [PF11648.10, score=40.5]; SWI2/SNF2 ATPase [PF18766.3, score=30.3]; H2C2 zinc finger [PF09337.12, score=19.8]; Integrase core domain [PF13683.8, score=18.3]} {Human: ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=170, Expect=3e-42]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=157, Expect=9e-39]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=61.6, Expect=7e-09]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=113, Expect=4e-25]} {Smed: dd_Smed_v6_3742_0_1, dd_Smed_v6_3742_0_1, [Score=219, Expect=7e-58]} {RNA1509_9178} {RNA1310_2530.1} {RNA815_790.1}
6. MligTC455_50612 274 5.7 Mlig455_006616

Neo: -

Age: -

APP 0.969 - - - - - 0.969 Mlig455_006616 {REF} {Length: 5834} {Pfam: Copper-binding of amyloid precursor, CuBD [PF12924.9, score=57.0]; Amyloid A4 N-terminal heparin-binding [PF02177.18, score=48.1]; Beta-amyloid precursor protein C-terminus [PF10515.11, score=33.3]; E2 domain of amyloid precursor protein [PF12925.9, score=25.6]} {Human: ENSG00000142192, APP, amyloid beta precursor protein, [RH, Score=114, Expect=6e-26]} {Mouse: ENSMUSG00000022892, App, amyloid beta (A4) precursor protein, [RH, Score=116, Expect=7e-27]} {Dmel: FBgn0000108, Appl, beta amyloid protein precursor-like, [RH, Score=103, Expect=9e-23]} {Celegans: WBGene00000149, apl-1, Beta-amyloid-like protein, [Score=88.6, Expect=3e-18]} {Smed: dd_Smed_v6_2561_0_1, dd_Smed_v6_2561_0_1, [Score=114, Expect=1e-26]} {RNA1509_8173} {RNA1310_12267} {RNA815_6032.1}
7. MligTC455_50063 414 8.62 Mlig455_033024

Neo: -

Age: Down-Up-Up

DPP8 0.966 - - - - - 0.966 Mlig455_033024 {REF} {Length: 3265} {TRANSSPLICED} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=158.7]; Dipeptidyl peptidase IV (DPP IV) N-terminal region [PF00930.23, score=142.4]} {Human: ENSG00000074603, DPP8, dipeptidyl peptidase 8, [RH, Score=403, Expect=2e-126]} {Mouse: ENSMUSG00000032393, Dpp8, dipeptidylpeptidase 8, [RH, Score=407, Expect=3e-128]} {Dmel: FBgn0039240, CG3744, [RH, Score=375, Expect=2e-114]} {Celegans: WBGene00001056, dpf-3, Dipeptidyl Peptidase Four (IV) family, [RH, Score=259, Expect=2e-73]} {Smed: dd_Smed_v6_8398_0_1, dd_Smed_v6_8398_0_1, [RH, Score=291, Expect=1e-85]} {RNA1509_5915} {RNA1310_4366, RNA1509_5915} {RNA1509_5915, RNA815_1863}
8. MligTC455_54039 319 6.65 Mlig455_046626

Neo: -

Age: -

CBX5 0.965 - - - - - 0.965 Mlig455_046626 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=70.0]; Chromo shadow domain [PF01393.21, score=61.7]} {Human: ENSG00000094916, CBX5, chromobox 5, [Score=132, Expect=2e-38]; ENSG00000122565, CBX3, chromobox 3, [Score=130, Expect=5e-38]} {Mouse: ENSMUSG00000009575, Cbx5, chromobox 5, [Score=132, Expect=1e-38]; ENSMUSG00000029836, Cbx3, chromobox 3, [Score=130, Expect=3e-38]} {Dmel: FBgn0003607, Su(var)205, Suppressor of variegation 205, [Score=117, Expect=1e-32]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [Score=83.6, Expect=4e-20]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=121, Expect=2e-34]} {RNA1509_58928} {RNA1310_4983} {RNA815_19481.1}
9. MligTC455_18590 632 13.16 Mlig455_006915, Mlig455_017931

Neo: -

Age: -

Region-enriched R3: 3.002/0.00887
Region-enriched R5: 2.798/0.00397

SLC25A37 0.956 - - - - - 0.956

Mlig455_006915 {REF} {Length: 3466} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=192.6]} {Human: ENSG00000147454, SLC25A37, solute carrier family 25 member 37, [RH, Score=321, Expect=1e-108]} {Mouse: ENSMUSG00000034248, Slc25a37, solute carrier family 25, member 37, [RH, Score=315, Expect=1e-106]; ENSMUSG00000040414, Slc25a28, solute carrier family 25, member 28, [RH, Score=305, Expect=3e-102]} {Dmel: FBgn0039561, mfrn, mitoferrin, [RH, Score=263, Expect=6e-86]} {Celegans: WBGene00012204, mfn-1, Mitoferrin, [RH, Score=257, Expect=3e-84]} {Smed: dd_Smed_v6_11061_0_1, dd_Smed_v6_11061_0_1, [RH, Score=317, Expect=5e-108]} {RNA1509_40499} {RNA1310_19207} {RNA815_13306}

Mlig455_017931 {REF} {Length: 3454} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=192.6]} {Human: ENSG00000147454, SLC25A37, solute carrier family 25 member 37, [RH, Score=321, Expect=1e-108]} {Mouse: ENSMUSG00000034248, Slc25a37, solute carrier family 25, member 37, [RH, Score=315, Expect=1e-106]; ENSMUSG00000040414, Slc25a28, solute carrier family 25, member 28, [RH, Score=305, Expect=3e-102]} {Dmel: FBgn0039561, mfrn, mitoferrin, [RH, Score=263, Expect=6e-86]} {Celegans: WBGene00012204, mfn-1, Mitoferrin, [RH, Score=257, Expect=3e-84]} {Smed: dd_Smed_v6_11061_0_1, dd_Smed_v6_11061_0_1, [RH, Score=317, Expect=5e-108]} {RNA1509_21388, RNA1509_36168, RNA1509_40499, RNA1509_48571, RNA1509_57782} {RNA1310_19207, RNA1509_21388, RNA1509_36168, RNA1509_40499, RNA1509_48571, RNA1509_57782} {RNA1509_21388, RNA1509_36168, RNA1509_40499, RNA1509_48571, RNA1509_57782, RNA815_13306}
10. MligTC455_38150 274 5.7 Mlig455_039526

Neo: -

Age: -

LONP2 0.956 - - - - - 0.956 Mlig455_039526 {REF} {Length: 2925} {Pfam: Lon protease (S16) C-terminal proteolytic domain [PF05362.15, score=142.2]; Subunit ChlI of Mg-chelatase [PF13541.8, score=30.9]} {Human: ENSG00000102910, LONP2, lon peptidase 2, peroxisomal, [Score=172, Expect=5e-45]} {Mouse: ENSMUSG00000047866, Lonp2, lon peptidase 2, peroxisomal, [Score=169, Expect=4e-46]} {Dmel: FBgn0036892, Lon, Lon protease, [Score=130, Expect=3e-31]} {Celegans: WBGene00013541, lonp-2, Lon protease homolog 2, peroxisomal, [Score=162, Expect=5e-42]} {Smed: dd_Smed_v6_3971_0_1, dd_Smed_v6_3971_0_1, [Score=122, Expect=8e-29]} {RNA1509_26509} {RNA1310_12358} {RNA815_34278}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA